Perfusion-weighted magnetic resonance imaging (MRI) is an imaging technique that allows one to measure tissue perfusion in an organ of interest through the injection of an intravascular paramagnetic contrast agent (CA). Due to a preference for high temporal and spatial resolution in many applications, this modality could significantly benefit from accelerated data acquisitions. In this paper, we specifically address the problem of reconstructing perfusion MR image series from a subset of k-space data. Our proposed approach is motivated by the observation that temporal variations (dynamics) in perfusion imaging often exhibit correlation across different spatial scales. Hence, we propose a model that jointly penalizes the voxel-wise deviations in temporal gradient images obtained based on a baseline, and the patch-wise dissimilarities between the spatio-temporal neighborhoods of entire image sequence. We validate our method on dynamic susceptibility contrast (DSC)-MRI and dynamic contrast-enhanced (DCE)-MRI brain perfusion datasets acquired from 10 tumor patients in total. We provide extensive analysis of reconstruction performance and perfusion parameter estimation in comparison to state-of-the-art reconstruction methods. Experimental results on clinical datasets demonstrate that our reconstruction model can potentially achieve up to 8-fold acceleration by enabling accurate estimation of perfusion parameters while preserving spatial image details and reconstructing the complete perfusion time-intensity curves (TICs).
University of Bern(伯尔尼大学);Department of Neurology, Inselspital, University of Bern(伯尔尼大学 Inselspital 神经科);Department of Neurology, University of California Los Angeles (UCLA)(加州大学洛杉矶分校(UCLA)神经科);Support Center for Advanced Neuroimaging, Institute for Diagnostic and Interventional Neuroradiology, Inselspital, University of Bern(伯尔尼大学 Inselspital 诊断与介入神经放射学研究所高级神经影像支持中心)
In this work, we present a novel convolutional neural net- work based method for perfusion map generation in dynamic suscepti- bility contrast-enhanced perfusion imaging. The proposed architecture is trained end-to-end and solely relies on raw perfusion data for inference. We used a dataset of 151 acute ischemic stroke cases for evaluation. Our method generates perfusion maps that are comparable to the target maps used for clinical routine, while being model-free, fast, and less noisy.
University of Minho(米尼奥大学);University Hospital Inselspital and University of Bern(Inselspital大学医院与伯尔尼大学);University of Bern(伯尔尼大学)
Stroke is the second most common cause of death in developed countries, where rapid clinical intervention can have a major impact on a patient's life. To perform the revascularization procedure, the decision making of physicians considers its risks and benefits based on multi-modal MRI and clinical experience. Therefore, automatic prediction of the ischemic stroke lesion outcome has the potential to assist the physician towards a better stroke assessment and information about tissue outcome. Typically, automatic methods consider the information of the standard kinetic models of diffusion and p…
To our knowledge, all deep computer-aided detection and diagnosis (CAD) systems for prostate cancer (PCa) detection consider bi-parametric magnetic resonance imaging (bp-MRI) only, including T2w and ADC sequences while excluding the 4D perfusion sequence,which is however part of standard clinical protocols for this diagnostic task. In this paper, we question strategies to integrate information from perfusion imaging in deep neural architectures. To do so, we evaluate several ways to encode the perfusion information in a U-Net like architecture, also considering early versus mid fusion strategi…
King’s College London(伦敦国王学院);The Alan Turing Institute(艾伦·图灵研究所);Eindhoven University of Technology(埃因霍温理工大学);Philips Healthcare(飞利浦医疗)
The quantification of myocardial perfusion MRI has the potential to provide a fast, automated and user-independent assessment of myocardial ischaemia. However, due to the relatively high noise level and low temporal resolution of the acquired data and the complexity of the tracer-kinetic models, the model fitting can yield unreliable parameter estimates. A solution to this problem is the use of Bayesian inference which can incorporate prior knowledge and improve the reliability of the parameter estimation. This, however, uses Markov chain Monte Carlo sampling to approximate the posterior distr…
Eindhoven University of Technology(埃因霍温理工大学);King’s College London(伦敦国王学院);Philips Healthcare(飞利浦医疗)
Tracer-kinetic models allow for the quantification of kinetic parameters such as blood flow from dynamic contrast-enhanced magnetic resonance (MR) images. Fitting the observed data with multi-compartment exchange models is desirable, as they are physiologically plausible and resolve directly for blood flow and microvascular function. However, the reliability of model fitting is limited by the low signal-to-noise ratio, temporal resolution, and acquisition length. This may result in inaccurate parameter estimates. This study introduces physics-informed neural networks (PINNs) as a means to perf…
National Heart, Lung and Blood Institute, National Institutes of Health(美国国立卫生研究院国家心肺血液研究所);Barts Health NHS Trust(巴特保健国民保健信托基金);University of Leeds(利兹大学);Royal Free Hospital(皇家自由医院)
Recent development of quantitative myocardial blood flow (MBF) mapping allows direct evaluation of absolute myocardial perfusion, by computing pixel-wise flow maps. Clinical studies suggest quantitative evaluation would be more desirable for objectivity and efficiency. Objective assessment can be further facilitated by segmenting the myocardium and automatically generating reports following the AHA model. This will free user interaction for analysis and lead to a 'one-click' solution to improve workflow. This paper proposes a deep neural network based computational workflow for inline myocardi…
National Technical University of Ukraine “Igor Sikorsky Kyiv Polytechnic Institute”(乌克兰国立技术大学“伊戈尔·西科斯基基辅理工学院”)
Accurate detection of arterial input function is a crucial step in obtaining perfusion hemodynamic parameters using dynamic susceptibility contrast-enhanced magnetic resonance imaging. It is required as input for perfusion quantification and has a great impact on the result of the deconvolution operation. To improve the reproducibility and reliability of arterial input function detection, several semi- or fully automatic methods have been proposed. This study provides an overview of the current state of the field of arterial input function detection. Methods most commonly used for semi- and fu…
The Johns Hopkins University School of Medicine(约翰斯·霍普金斯大学医学院);Sidney Kimmel Comprehensive Cancer Center(西德尼·金梅尔综合癌症中心);The Johns Hopkins University(约翰斯·霍普金斯大学)
The evaluation and treatment of acute cerebral ischemia requires a technique that can determine the total area of tissue at risk for infarction using diagnostic magnetic resonance imaging (MRI) sequences. Typical MRI data sets consist of T1- and T2-weighted imaging (T1WI, T2WI) along with advanced MRI parameters of diffusion-weighted imaging (DWI) and perfusion weighted imaging (PWI) methods. Each of these parameters has distinct radiological-pathological meaning. For example, DWI interrogates the movement of water in the tissue and PWI gives an estimate of the blood flow, both are critical me…
Arterial spin labeling (ASL) allows to quantify the cerebral blood flow (CBF) by magnetic labeling of the arterial blood water. ASL is increasingly used in clinical studies due to its noninvasiveness, repeatability and benefits in quantification. However, ASL suffers from an inherently low-signal-to-noise ratio (SNR) requiring repeated measurements of control/spin-labeled (C/L) pairs to achieve a reasonable image quality, which in return increases motion sensitivity. This leads to clinically prolonged scanning times increasing the risk of motion artifacts. Thus, there is an immense need of adv…
Improved Robustness for Deep Learning-based Segmentation of Multi-Center Myocardial Perfusion MRI Datasets Using Data Adaptive Uncertainty-guided Space-time Analysis
Indiana University School of Medicine(印第安纳大学医学院);Purdue University(普渡大学);University of Calgary(卡尔加里大学);Cedars-Sinai Medical Center(西达赛奈医疗中心);Duke University(杜克大学);The Ohio State University(俄亥俄州立大学);Weill Cornell Medical Center(威尔康奈尔医学中心);OhioHealth(俄亥俄健康)
University of Oxford(牛津大学);Oxford University Hospitals NHS Foundation Trust(牛津大学医院国民保健服务基金会信托);King’s College London(伦敦国王学院)
Rectal tumour segmentation in dynamic contrast-enhanced MRI (DCE-MRI) is a challenging task, and an automated and consistent method would be highly desirable to improve the modelling and prediction of patient outcomes from tissue contrast enhancement characteristics - particularly in routine clinical practice. A framework is developed to automate DCE-MRI tumour segmentation, by introducing: perfusion-supervoxels to over-segment and classify DCE-MRI volumes using the dynamic contrast enhancement characteristics; and the pieces-of-parts graphical model, which adds global (anatomic) constraints t…
The University of Iowa(爱荷华大学);University of Utah(犹他大学)
We propose a novel deformation corrected compressed sensing (DC-CS) framework to recover dynamic magnetic resonance images from undersampled measurements. We introduce a generalized formulation that is capable of handling a wide class of sparsity/compactness priors on the deformation corrected dynamic signal. In this work, we consider example compactness priors such as sparsity in temporal Fourier domain, sparsity in temporal finite difference domain, and nuclear norm penalty to exploit low rank structure. Using variable splitting, we decouple the complex optimization problem to simpler and we…
University of California San Francisco(加州大学旧金山分校);University of Pennsylvania(宾夕法尼亚大学)
Here we present the University of California San Francisco Preoperative Diffuse Glioma MRI (UCSF-PDGM) dataset. The UCSF-PDGM dataset includes 500 subjects with histopathologically-proven diffuse gliomas who were imaged with a standardized 3 Tesla preoperative brain tumor MRI protocol featuring predominantly 3D imaging, as well as advanced diffusion and perfusion imaging techniques. The dataset also includes isocitrate dehydrogenase (IDH) mutation status for all cases and O6-methylguanine-DNA methyltransferase (MGMT) promotor methylation status for World Health Organization (WHO) grade III and…
Acute stroke lesion segmentation tasks are of great clinical interest as they can help doctors make better informed treatment decisions. Magnetic resonance imaging (MRI) is time demanding but can provide images that are considered gold standard for diagnosis. Automated stroke lesion segmentation can provide with an estimate of the location and volume of the lesioned tissue, which can help in the clinical practice to better assess and evaluate the risks of each treatment. We propose a deep learning methodology for acute and sub-acute stroke lesion segmentation using multimodal MR imaging. The p…
Low-rank tensor models have been applied in accelerating dynamic magnetic resonance imaging (dMRI). Recently, a new tensor nuclear norm based on t-SVD has been proposed and applied to tensor completion. Inspired by the different properties of the tensor nuclear norm (TNN) and the Casorati matrix nuclear norm (MNN), we introduce a combined TNN and Casorati MNN regularizations framework to reconstruct dMRI, which we term as TMNN. The proposed method simultaneously exploits the spatial structure and the temporal correlation of the dynamic MR data. The optimization problem can be efficiently solve…
This thesis focuses on the research and development of the Hemodynamic Tissue Signature (HTS) method: an unsupervised machine learning approach to describe the vascular heterogeneity of glioblastomas by means of perfusion MRI analysis. The HTS builds on the concept of habitats. An habitat is defined as a sub-region of the lesion with a particular MRI profile describing a specific physiological behavior. The HTS method delineates four habitats within the glioblastoma: the High Angiogenic Tumor (HAT) habitat, as the most perfused region of the enhancing tumor; the Low Angiogenic Tumor (LAT) habi…
Department Artificial Intelligence in Biomedical Engineering, Friedrich-Alexander-Universität Erlangen-Nürnberg(生物医学工程人工智能系,埃尔朗根-纽伦堡弗里德里希-亚历山大大学);Department of Biomedical Engineering, The Ohio State University(生物医学工程系,俄亥俄州立大学);Research & Clinical Translation, Magnetic Resonance, Siemens Healthineers AG(研究与临床转化,磁共振,西门子医疗有限公司);Division of Cardiovascular Medicine, The Ohio State University(心血管医学系,俄亥俄州立大学)
University College London(伦敦大学学院);Technion -- Israel Institute of Technology(以色列理工学院);Heriot-Watt University(赫瑞-瓦特大学)
Medical imaging tasks often involve multiple contrasts, such as T1- and T2-weighted magnetic resonance imaging (MRI) data. These contrasts capture information associated with the same underlying anatomy and thus exhibit similarities. In this paper, we propose a Coupled Dictionary Learning based multi-contrast MRI reconstruction (CDLMRI) approach to leverage an available guidance contrast to restore the target contrast. Our approach consists of three stages: coupled dictionary learning, coupled sparse denoising, and $k$-space consistency enforcing. The first stage learns a group of dictionaries…
University of Florida(佛罗里达大学);National Institutes of Health Clinical Center(国立卫生研究院临床中心)
Deep neural networks have demonstrated very promising performance on accurate segmentation of challenging organs (e.g., pancreas) in abdominal CT and MRI scans. The current deep learning approaches conduct pancreas segmentation by processing sequences of 2D image slices independently through deep, dense per-pixel masking for each image, without explicitly enforcing spatial consistency constraint on segmentation of successive slices. We propose a new convolutional/recurrent neural network architecture to address the contextual learning and segmentation consistency problem. A deep convolutional …
Middlesex University(密德萨斯大学);UCL Institute of Child Health(伦敦大学学院儿童健康研究所);University of Surrey(萨里大学)
Delineation of the kidney region in dynamic contrast-enhanced magnetic resonance Imaging (DCE-MRI) is required during post-acquisition analysis in order to quantify various aspects of renal function, such as filtration and perfusion or blood flow. However, this can be obfuscated by the Partial Volume Effect (PVE), caused due to the mixing of any single voxel with two or more signal intensities from adjacent regions such as liver region and other tissues. To avoid this problem, firstly, a kidney region of interest (ROI) needs to be defined for the analysis. A clinician may choose to select a re…
Bridging MRI and PET physiology: Untangling complementarity through orthogonal representations
Dept. of diagnostic and interventional Radiology and Neuroradiology, University Hospital Augsburg, Germany(德国奥格斯堡大学医院诊断与介入放射学及神经放射学系);Digital Medicine, University Hospital Augsburg, Germany(德国奥格斯堡大学医院数字医学);Chair for Computer Aided Medical Procedures and Augmented Reality, Technical University of Munich, Germany(德国慕尼黑工业大学计算机辅助医疗流程与增强现实教席);Bavarian Center for Cancer Research (BZKF) Augsburg, Germany(德国奥格斯堡巴伐利亚癌症研究中心);Dept. of Nuclear Medicine, University Hospital Augsburg, Germany(德国奥格斯堡大学医院核医学系);Dept. of Urology, University Hospital Augsburg, Germany(德国奥格斯堡大学医院泌尿外科);Center for Advanced Analytics and Predictive Sciences, University of Augsburg, Germany(德国奥格斯堡大学高级分析与预测科学中心)
Lesion-Aware Post-Training of Latent Diffusion Models for Synthesizing Diffusion MRI from CT Perfusion
College of Medicine, Seoul National University, Seoul, Republic of Korea(首尔国立大学医学院);Department of Radiology, Seoul National University Hospital(首尔国立大学医院放射科);Department of Biomedical Sciences, Seoul National University(首尔国立大学生物医学科学系)
DuetMatch: Harmonizing Semi-Supervised Brain MRI Segmentation via Decoupled Branch Optimization
Carnegie Mellon University(卡内基梅隆大学);North Carolina A&T State University(北卡罗来纳农工州立大学);Ho Chi Minh University of Technology(胡志明市理工大学);University of Alabama at Birmingham(阿拉巴马大学伯明翰分校);Northwestern University(西北大学)
Unified 3D MRI Representations via Sequence-Invariant Contrastive Learning
Department of Imaging Neuroscience, University College London, UK(影像神经科学系,伦敦大学学院,英国);Institute of Cognitive Neuroscience, University College London, UK(认知神经科学研究所,伦敦大学学院,英国)
We consider an MRI reconstruction problem with input of k-space data at a very low undersampled rate. This can practically benefit patient due to reduced time of MRI scan, but it is also challenging since quality of reconstruction may be compromised. Currently, deep learning based methods dominate MRI reconstruction over traditional approaches such as Compressed Sensing, but they rarely show satisfactory performance in the case of low undersampled k-space data. One explanation is that these methods treat channel-wise features equally, which results in degraded representation ability of the neu…
Deep Learning-Based Fetal Lung Segmentation from Diffusion-weighted MRI Images and Lung Maturity Evaluation for Fetal Growth Restriction
School of Biomedical Engineering and Imaging Sciences, King's College London, London, UK(生物医学工程与成像科学学院,伦敦国王学院);Elizabeth Garrett Anderson Institute for Women’s Health, University College, London, UK(埃利扎贝塔·加德纳妇女健康研究所,大学学院,伦敦);University College London Hospital NHS Foundation Trust, London, UK(伦敦大学学院医院国家健康服务信托基金);Department of Medical Physics and Biomedical Engineering, University College London Hospitals, London, UK(医学物理与生物医学工程系,伦敦大学学院医院);Department of Radiology, University College London Hospitals NHS Foundation Trust, London, United Kingdom(放射科,伦敦大学学院医院国家健康服务信托基金)
Hierarchical Perfusion Graphs for Tumor Heterogeneity Modeling in Glioma Molecular Subtyping
Interdisciplinary Program in Bioengineering, Seoul National University, Seoul, South Korea(生物工程跨学科项目,首尔国立大学,首尔,韩国);Interdisciplinary Program in Cancer Biology, Seoul National University College of Medicine, Seoul, South Korea(癌症生物学跨学科项目,首尔国立大学医学院,首尔,韩国);Dept. of Biomedical Sciences, Seoul National University, Seoul, South Korea(生物医学科学系,首尔国立大学,首尔,韩国);Dept. of Electronic Engineering, Soongsil University, Seoul, South Korea(电子工程系,顺世大学,首尔,韩国);Dept. of Radiology, Seoul National University Hospital, Seoul, South Korea(放射科,首尔国立大学医院,首尔,韩国);Dept. of Radiology, Seoul National University College of Medicine, Seoul, South Korea(放射科,首尔国立大学医学院,首尔,韩国);Healthcare AI Research Institute, Seoul National University Hospital, Seoul, South Korea(医疗人工智能研究院,首尔国立大学医院,首尔,韩国)
Université Côte d’Azur(蔚蓝海岸大学);Inria(法国国家信息与自动化研究所);Centre Antoine Lacassagne(安托万·拉卡桑中心)
Planning of radiotherapy involves accurate segmentation of a large number of organs at risk, i.e. organs for which irradiation doses should be minimized to avoid important side effects of the therapy. We propose a deep learning method for segmentation of organs at risk inside the brain region, from Magnetic Resonance (MR) images. Our system performs segmentation of eight structures: eye, lens, optic nerve, optic chiasm, pituitary gland, hippocampus, brainstem and brain. We propose an efficient algorithm to train neural networks for an end-to-end segmentation of multiple and non-exclusive class…
DUN-SRE: Deep Unrolling Network with Spatiotemporal Rotation Equivariance for Dynamic MRI Reconstruction
University of Nottingham Ningbo China(诺丁汉大学宁波校区);Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences(深圳先进技术研究院);School of Mathematics and Statistics, Xi’an Jiaotong University(西安交通大学数学与统计学院)
Self-Supervised k-Space Regularization for Motion-Resolved Abdominal MRI Using Neural Implicit k-Space Representation
Helmholtz Center Munich(慕尼黑亥姆霍兹中心);Technical University of Munich(慕尼黑工业大学);Imperial College London(伦敦帝国学院);Millenium Institute for Intelligent Healthcare Engineering(千禧智能医疗工程研究所);Pontificia Universidad Católica de Chile(智利天主教大学);King’s College London(伦敦国王学院)
University of Cambridge(剑桥大学);Université Clermont Auvergne(克莱蒙奥弗涅大学);CNRS(法国国家科学研究中心);SIGMA Clermont(克莱蒙西格玛工程师学院);Institut Pascal(帕斯卡研究所);Wolfson Brain Imaging Centre(沃尔夫森脑成像中心);Cambridge University Hospitals(剑桥大学医院)
We address the problem of reconstructing high quality images from undersampled MRI data. This is a challenging task due to the highly ill-posed nature of the problem. In particular, in dynamic MRI scans, the interaction between the target structure and the physical motion affects the acquired measurements leading to blurring artefacts and loss of fine details. In this work, we propose a framework for dynamic MRI reconstruction framed under a new multi-task optimisation model called Compressed Sensing Plus Motion (CS+M). Firstly, we propose a single optimisation problem that simultaneously comp…
VolTA-3D: Self-Supervised Learning for Brain MRI using 3D Volumetric Token Alignment
Institute of Health Informatics(健康信息学研究所);Sheikh Zayed Institute for Pediatric Surgical Innovation(谢赫扎耶德儿童外科创新研究所);School of Medicine and Health Sciences(医学与健康科学学院)
ETH Zurich(苏黎世联邦理工学院);University Children's Hospital Zurich(苏黎世大学儿童医院)
Intravoxel incoherent motion (IVIM) imaging allows contrast-agent free in vivo perfusion quantification with magnetic resonance imaging (MRI). However, its use is limited by typically low accuracy due to low signal-to-noise ratio (SNR) at large gradient encoding magnitudes as well as dephasing artefacts caused by subject motion, which is particularly challenging in fetal MRI. To mitigate this problem, we propose an implicit IVIM signal acquisition model with which we learn full posterior distribution of perfusion parameters using artificial neural networks. This posterior then encapsulates the…
Massachusetts General Hospital(麻省总医院);Harvard Medical School(哈佛医学院);Johns Hopkins University(约翰斯·霍普金斯大学);University of Maryland School of Dentistry(马里兰大学牙医学院)
Cycle reconstruction regularized adversarial training -- e.g., CycleGAN, DiscoGAN, and DualGAN -- has been widely used for image style transfer with unpaired training data. Several recent works, however, have shown that local distortions are frequent, and structural consistency cannot be guaranteed. Targeting this issue, prior works usually relied on additional segmentation or consistent feature extraction steps that are task-specific. To counter this, this work aims to learn a general add-on structural feature extractor, by explicitly enforcing the structural alignment between an input and it…
University of North Carolina at Chapel Hill(北卡罗来纳大学教堂山分校);Kitware, Inc.(Kitware公司)
Perfusion imaging (PI) is clinically used to assess strokes and brain tumors. Commonly used PI approaches based on magnetic resonance imaging (MRI) or computed tomography (CT) measure the effect of a contrast agent moving through blood vessels and into tissue. Contrast-agent free approaches, for example, based on intravoxel incoherent motion, also exist, but are so far not routinely used clinically. These methods rely on estimating on the arterial input function (AIF) to approximately model tissue perfusion, neglecting spatial dependencies, and reliably estimating the AIF is also non-trivial, …
DiffuSAM: Diffusion-Based Prompt-Free SAM2 for Few-Shot and Source-Free Medical Image Segmentation
School of Electrical Engineering, Tel Aviv University, Israel(特拉维夫大学电气工程学院);School of Biomedical Engineering, Tel Aviv University, Israel(特拉维夫大学生物医学工程学院)
Amsterdam UMC(阿姆斯特丹大学医学中心);University of Amsterdam(阿姆斯特丹大学);MS Center Amsterdam(阿姆斯特丹多发性硬化中心);Amsterdam Neuroscience(阿姆斯特丹神经科学研究所);Vrije Universiteit Amsterdam(阿姆斯特丹自由大学);Leiden University(莱顿大学);Delft University of Technology(代尔夫特理工大学)
Machine Learning methods can learn how to reconstruct Magnetic Resonance Images and thereby accelerate acquisition, which is of paramount importance to the clinical workflow. Physics-informed networks incorporate the forward model of accelerated MRI reconstruction in the learning process. With increasing network complexity, robustness is not ensured when reconstructing data unseen during training. We aim to embed data consistency (DC) in deep networks while balancing the degree of network complexity. While doing so, we will assess whether either explicit or implicit enforcement of DC in varyin…
Leiden University Medical Center(莱顿大学医学中心);Delft University of Technology(代尔夫特理工大学)
Hadamard time-encoded pseudo-continuous arterial spin labeling (te-pCASL) is a signal-to-noise ratio (SNR)-efficient MRI technique for acquiring dynamic pCASL signals that encodes the temporal information into the labeling according to a Hadamard matrix. In the decoding step, the contribution of each sub-bolus can be isolated resulting in dynamic perfusion scans. When acquiring te-ASL both with and without flow-crushing, the ASL-signal in the arteries can be isolated resulting in 4D-angiographic information. However, obtaining multi-timepoint perfusion and angiographic data requires two acquis…
DSA-NRP: No-Reflow Prediction from Angiographic Perfusion Dynamics in Stroke EVT
Department of Electrical and Computer Engineering, UCLA(电气与计算机工程系,加州大学洛杉矶分校);Medical Informatics, UCLA(医学信息学,加州大学洛杉矶分校);Department of Radiological Sciences, UCLA(放射科学系,加州大学洛杉矶分校);Department of Radiology, UC San Francisco(放射科,旧金山大学医学院);Department of Bioengineering, UCLA(生物工程系,加州大学洛杉矶分校);Department of Pathology and Laboratory Medicine, UCLA(病理学与实验室医学系,加州大学洛杉矶分校)
PISCO: Self-Supervised k-Space Regularization for Improved Neural Implicit k-Space Representations of Dynamic MRI
Helmholtz Munich(亥姆霍兹慕尼黑中心);Technical University of Munich(慕尼黑工业大学);Klinikum rechts der Isar(右岸医院(慕尼黑工业大学附属));Imperial College London(帝国理工学院);Pontificia Universidad Católica de Chile(智利天主教大学);King’s College London(伦敦国王学院)
College of Health Science and Environmental Engineering, Shenzhen Technology University(深圳科技大学健康科学与环境工程学院);University Medical Center Göttingen(哥廷根大学医学中心);Guangdong-Hongkong-Macau CNS Regeneration Institute, Key Laboratory of CNS Regeneration (Jinan University)-Ministry of Education, Jinan University(广东-港澳-澳门神经科学再生研究所,神经科学再生重点实验室(暨南大学)-教育部,暨南大学);Department of Radiology, The First Hospital of Tsinghua University(清华大学第一医院放射科);Center for Biomedical Imaging Research, Department of Biomedical Engineering, School of Medicine, Tsinghua University(清华大学生物医学成像研究中心,生物医学工程系,医学院);Key Laboratory for Biomedical Engineering of Ministry of Education, College of Biomedical Engineering and Instrument Science, Zhejiang University(教育部生物医学工程重点实验室,生物医学工程与仪器科学学院,浙江大学);Department of Endocrinology and Metabolism, Sir Run Run Shaw Hospital, Zhejiang University School of Medicine(浙江大学医学院邵逸夫医院内分泌科);Lab of Molecular Imaging and Medical Intelligence, Department of Radiology, Longgang Central Hospital of Shenzhen (Shenzhen Clinical Medical College, Guangzhou University of Chinese Medicine(分子成像与医学智能实验室,放射科,深圳龙岗中心医院(深圳临床医学院,广州中医药大学;龙岗临床学院,汕头大学医学院));Longgang Clinical Institute of Shantou University Medical College)
Temple University(天普大学);University of Maryland School of Medicine(马里兰大学医学院)
Arterial spin labeling (ASL) perfusion MRI provides a non-invasive way to quantify cerebral blood flow (CBF) but it still suffers from a low signal-to-noise-ratio (SNR). Using deep machine learning (DL), several groups have shown encouraging denoising results. Interestingly, the improvement was obtained when the deep neural network was trained using noise-contaminated surrogate reference because of the lack of golden standard high quality ASL CBF images. More strikingly, the output of these DL ASL networks (ASLDN) showed even higher SNR than the surrogate reference. This phenomenon indicates a…
Arterial spin labeling perfusion MRI is a noninvasive technique for measuring quantitative cerebral blood flow (CBF), but the measurement is subject to a low signal-to-noise-ratio(SNR). Various post-processing methods have been proposed to denoise ASL MRI but only provide moderate improvement. Deep learning (DL) is an emerging technique that can learn the most representative signal from data without prior modeling which can be highly complex and analytically indescribable. The purpose of this study was to assess whether the record breaking performance of DL can be translated into ASL MRI denoi…
Compal Electronics(仁宝电脑);Chang Gung Memorial Hospital(长庚纪念医院);Chang Gung University(长庚大学)
Purpose Automated detection of region of interest (ROI) is a critical step for many medical image applications such as heart ROIs detection in perfusion MRI images, lung boundary detection in chest X-rays, and femoral head detection in pelvic radiographs. Thus, we proposed a practical framework of ROIs detection in medical images, with a case study for hip detection in anteroposterior (AP) pelvic radiographs. Materials and Methods: We conducted a retrospective study which analyzed hip joints seen on 7,399 AP pelvic radiographs from three diverse sources, including 4,290 high resolution radiogr…
Anguinus Sculpturae: Compositional Synthesis of Peak-Enhancement Breast DCE-MRI Scans
German Cancer Research Center (DKFZ)(德国癌症研究中心);Heidelberg University(海德堡大学);HIDSS4Health – Helmholtz Information and Data Science School for Health(HIDSS4Health – 亥姆霍兹健康信息与数据科学学校);Helmholtz Imaging(亥姆霍兹成像中心)
GreenRFM: Learning a resource-efficient radiology vision-language foundation model via supervision-centric pre-training
School of Biomedical Engineering, Division of Life Sciences and Medicine, University of Science and Technology of China (USTC)(生物医学工程学院,生命科学与医学系,中国科学技术大学);Center for Medical Imaging, Robotics, Analytic Computing & Learning (MIRACLE)(医学影像、机器人、分析计算与学习中心);Suzhou Institute for Advanced Research, USTC(苏州先进研究院,中国科学技术大学);Department of Radiology, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, USTC(放射科,中国科学技术大学第一附属医院,生命科学与医学系,中国科学技术大学);T Magnetic Resonance Translational Medicine Research Center, Department of Radiology, The First Affiliated Hospital (Southwest Hospital) of Army Medical University(7T磁共振转化医学研究中心,放射科,中国医学大学第一附属医院(西南医院))
Automatic Landmark-Based Segmentation of Human Subcortical Structures in MRI
École de technologie supérieure (ÉTS)(埃克塞尔技术高等学院);Boston University School of Medicine(波士顿大学医学学院);Signal and Smart Systems Lab (L3S)(信号与智能系统实验室);National School of Engineering of Tunis, University of Tunis El Manar(突尼斯国家工程学院,突尼斯El Manar大学)
The Chinese University of Hong Kong(香港中文大学);Tencent Jarvis Lab(腾讯医疗健康(深圳)有限公司(腾讯天衍实验室));Institute of Computing Technology, Chinese Academy of Sciences(中国科学院计算技术研究所);The University of Hong Kong(香港大学);Tsinghua University(清华大学);Brigham and Women’s Hospital(布莱根妇女医院);Harvard Medical School(哈佛医学院)
Semi-supervised learning has substantially advanced medical image segmentation since it alleviates the heavy burden of acquiring the costly expert-examined annotations. Especially, the consistency-based approaches have attracted more attention for their superior performance, wherein the real labels are only utilized to supervise their paired images via supervised loss while the unlabeled images are exploited by enforcing the perturbation-based \textit{"unsupervised"} consistency without explicit guidance from those real labels. However, intuitively, the expert-examined real labels contain more…
Physics-Driven Autoregressive State Space Models for Medical Image Reconstruction
Dept. of Electrical and Electronics Engineering, and National Magnetic Resonance Research Center (UMRAM), Bilkent University(电气与电子工程系,国家磁共振研究中心(UMRAM),比尔肯大学)