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arXiv 2306.14725eess.IVcs.CV

用于晚期钆增强心脏磁共振图像心肌梗死瘢痕分割的纠错型2D-3D级联网络

Error correcting 2D-3D cascaded network for myocardial infarct scar segmentation on late gadolinium enhancement cardiac magnetic resonance images

Medical University of Innsbruck(因斯布鲁克医科大学);University of Innsbruck(因斯布鲁克大学)

Matthias Schwab, Mathias Pamminger, Christian Kremser, Daniel Obmann, Markus Haltmeier, Agnes Mayr

AI总结:

针对LGE CMR图像中心肌梗死瘢痕难以自动分割的问题,提出一种人工模拟并由3D网络纠正2D错误的2D-3D级联CNN框架,在两个公开数据集上优于现有方法。

摘要:

晚期钆增强(LGE)心脏磁共振(CMR)成像被认为是评估ST段抬高型心肌梗死(STEMI)患者梗死面积(IS)和微血管阻塞(MVO)的在体参考标准。然而,对这些心肌梗死严重程度标志物进行精确量化仍然具有挑战性且非常耗时。由于LGE分布模式可能相当复杂,并且难以与血池或心外膜脂肪区分,LGE CMR图像的自动分割颇具挑战。在本研究中,我们提出了一种由二维和三维卷积神经网络(CNN)组成的级联框架,能够以全自动方式计算心肌梗死范围。通过在级联框架训练期间人工生成2D CNN特有的分割错误,我们强制实现对2D分割错误的检测与纠正,从而提高整个方法的分割精度。所提出的方法在两个公开可用数据集上进行了训练和评估。我们开展了对比实验,结果表明本框架在心肌梗死分割方面优于最先进的参考方法。此外,在大量消融研究中,我们展示了所提出的纠错级联方法所带来的优势。本项目代码公开于https://github.com/matthi99/EcorC.git。

英文摘要:

Late gadolinium enhancement (LGE) cardiac magnetic resonance (CMR) imaging is considered the in vivo reference standard for assessing infarct size (IS) and microvascular obstruction (MVO) in ST-elevation myocardial infarction (STEMI) patients. However, the exact quantification of those markers of myocardial infarct severity remains challenging and very time-consuming. As LGE distribution patterns can be quite complex and hard to delineate from the blood pool or epicardial fat, automatic segmentation of LGE CMR images is challenging. In this work, we propose a cascaded framework of two-dimensional and three-dimensional convolutional neural networks (CNNs) which enables to calculate the extent of myocardial infarction in a fully automated way. By artificially generating segmentation errors which are characteristic for 2D CNNs during training of the cascaded framework we are enforcing the detection and correction of 2D segmentation errors and hence improve the segmentation accuracy of the entire method. The proposed method was trained and evaluated on two publicly available datasets. We perform comparative experiments where we show that our framework outperforms state-of-the-art reference methods in segmentation of myocardial infarction. Furthermore, in extensive ablation studies we show the advantages that come with the proposed error correcting cascaded method. The code of this project is publicly available at https://github.com/matthi99/EcorC.git

机构、总结、中文摘要均由AI分析而来,可能存在错误,请以论文正文为准。

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