In the Directed Long Cycle Hitting Set} problem we are given a directed graph $G$, and the task is to find a set $S$ of at most $k$ vertices/arcs such that $G-S$ has no cycle of length longer than $\ell$. We show that the problem can be solved in time $2^{\mathcal O(\ell k^3\log k + k^5\log k\log\ell)}\cdot n^{\mathcal O(1)}$, that is, it is fixed-parameter tractable (FPT) parameterized by $k$ and $\ell$. This algorithm can be seen as a far-reaching generalization of the fixed-parameter tractability of {\sc Mixed Graph Feedback Vertex Set} [Bonsma and Lokshtanov WADS 2011], which is already a common generalization of the fixed-parameter tractability of (undirected) {\sc Feedback Vertex Set} and the {\sc Directed Feedback Vertex Set} problems, two classic results in parameterized algorithms. The algorithm requires significant insights into the structure of graphs without directed cycles length longer than $\ell$ and can be seen as an exact version of the approximation algorithm following from the Erd{ő}s-P{ó}sa property for long cycles in directed graphs proved by Kreutzer and Kawarabayashi [STOC 2015].
For a finite collection of graphs ${\cal F}$, the \textsc{${\cal F}$-TM-Deletion} problem has as input an $n$-vertex graph $G$ and an integer $k$ and asks whether there exists a set $S \subseteq V(G)$ with $|S| \leq k$ such that $G \setminus S$ does not contain any of the graphs in ${\cal F}$ as a topological minor. We prove that for every such ${\cal F}$, \textsc{${\cal F}$-TM-Deletion} is fixed parameter tractable on planar graphs. Our algorithm runs in a $2^{\mathcal{O}(k^2)}\cdot n^{2}$ time or, alternatively in $2^{\mathcal{O}(k)}\cdot n^{4}$ time. Our techniques can easily be extended to…
We study the complexity of the Hitting Set problem in set systems (hypergraphs) that avoid certain sub-structures. In particular, we characterize the classical and parameterized complexity of the problem when the Vapnik-Chervonenkis dimension (VC-dimension) of the input is small. VC-dimension is a natural measure of complexity of set systems. Several tractable instances of Hitting Set with a geometric or graph-theoretical flavor are known to have low VC-dimension. In set systems of bounded VC-dimension, Hitting Set is known to admit efficient and almost optimal approximation algorithms (Brönni…
In the {\sc Hitting Set} problem, we are given a collection $\cal F$ of subsets of a ground set $V$ and an integer $p$, and asked whether $V$ has a $p$-element subset that intersects each set in $\cal F$. We consider two parameterizations of {\sc Hitting Set} below tight upper bounds: $p=m-k$ and $p=n-k$. In both cases $k$ is the parameter. We prove that the first parameterization is fixed-parameter tractable, but has no polynomial kernel unless coNP$\subseteq$NP/poly. The second parameterization is W[1]-complete, but the introduction of an additional parameter, the degeneracy of the hypergrap…
We resolve positively a long standing open question regarding the fixed-parameter tractability of the parameterized Directed Feedback Vertex Set problem. In particular, we propose an algorithm which solves this problem in $O(8^kk!*poly(n))$.
A hitting set for a collection of sets is a set that has a non-empty intersection with each set in the collection; the hitting set problem is to find a hitting set of minimum cardinality. Motivated by instances of the hitting set problem where the number of sets to be hit is large, we introduce the notion of implicit hitting set problems. In an implicit hitting set problem the collection of sets to be hit is typically too large to list explicitly; instead, an oracle is provided which, given a set H, either determines that H is a hitting set or returns a set that H does not hit. We show a numbe…
In the Directed $k$-Chinese Postman Problem ($k$-DCPP), we are given a connected weighted digraph $G$ and asked to find $k$ non-empty closed directed walks covering all arcs of $G$ such that the total weight of the walks is minimum. Gutin, Muciaccia and Yeo (Theor. Comput. Sci. 513 (2013) 124--128) asked for the parameterized complexity of $k$-DCPP when $k$ is the parameter. We prove that the $k$-DCPP is fixed-parameter tractable. We also consider a related problem of finding $k$ arc-disjoint directed cycles in an Euler digraph, parameterized by $k$. Slivkins (ESA 2003) showed that this proble…
Given a graph G and k pairs of vertices (s_1,t_1), ..., (s_k,t_k), the k-Vertex-Disjoint Paths problem asks for pairwise vertex-disjoint paths P_1, ..., P_k such that P_i goes from s_i to t_i. Schrijver [SICOMP'94] proved that the k-Vertex-Disjoint Paths problem on planar directed graphs can be solved in time n^{O(k)}. We give an algorithm with running time 2^{2^{O(k^2)}} n^{O(1)} for the problem, that is, we show the fixed-parameter tractability of the problem.
Given a directed graph $G$ and a list $(s_1,t_1),\dots,(s_d,t_d)$ of terminal pairs, the Directed Steiner Network problem asks for a minimum-cost subgraph of $G$ that contains a directed $s_i\to t_i$ path for every $1\le i \le k$. The special case Directed Steiner Tree (when we ask for paths from a root $r$ to terminals $t_1,\dots,t_d$) is known to be fixed-parameter tractable parameterized by the number of terminals, while the special case Strongly Connected Steiner Subgraph (when we ask for a path from every $t_i$ to every other $t_j$) is known to be W[1]-hard. We systematically explore the …
We consider a CNF formula $F$ as a multiset of clauses: $F=\{c_1,..., c_m\}$. The set of variables of $F$ will be denoted by $V(F)$. Let $B_F$ denote the bipartite graph with partite sets $V(F)$ and $F$ and with an edge between $v \in V(F)$ and $c \in F$ if $v \in c$ or $\bar{v} \in c$. The matching number $ν(F)$ of $F$ is the size of a maximum matching in $B_F$. In our main result, we prove that the following parameterization of {\sc MaxSat} (denoted by $(ν(F)+k)$-\textsc{SAT}) is fixed-parameter tractable: Given a formula $F$, decide whether we can satisfy at least $ν(F)+k$ clauses in $F$, w…
We consider the parameterized complexity of the problem of tracking shortest s-t paths in graphs, motivated by applications in security and wireless networks. Given an undirected and unweighted graph with a source s and a destination t, Tracking Shortest Paths asks if there exists a k-sized subset of vertices (referred to as tracking set) that intersects each shortest s-t path in a distinct set of vertices. We first generalize this problem for set systems, namely Tracking Set System, where given a family of subsets of a universe, we are required to find a subset of elements from the universe t…
We study the complexity of a generic hitting problem H-Subgraph Hitting, where given a fixed pattern graph $H$ and an input graph $G$, the task is to find a set $X \subseteq V(G)$ of minimum size that hits all subgraphs of $G$ isomorphic to $H$. In the colorful variant of the problem, each vertex of $G$ is precolored with some color from $V(H)$ and we require to hit only $H$-subgraphs with matching colors. Standard techniques shows that for every fixed $H$, the problem is fixed-parameter tractable parameterized by the treewidth of $G$; however, it is not clear how exactly the running time shou…
In the Topological Minor Deletion (TM-Deletion) problem input consists of an undirected graph $G$, a family of undirected graphs ${\cal F}$ and an integer $k$. The task is to determine whether $G$ contains a set of vertices $S$ of size at most $k$, such that the graph $G\setminus S$ obtained from $G$ by removing the vertices of $S$, contains no graph from ${\cal F}$ as a topological minor. We give an algorithm for TM-Deletionwith running time $f(h^\star,k)\cdot |V(G)|^{4}$. Here $h^\star$ is the maximum size of a graph in ${\cal F}$ and $f$ is a computable function of $h^\star$ and $k$. This i…
We study an "above guarantee" version of the {\sc Longest Path} problem in directed graphs: We are given a graph $G$, two vertices $s$ and $t$ of $G$, and a non-negative integer $k$, and the objective is to determine whether $G$ contains a path of length at least $dist_G(s,t) +k$ where $dist_G(s,t)$ is the length of a shortest path from $s$ to $t$ in $G$ (assuming that one exists). We show that the problem is fixed parameter tractable (FPT) parameterized by $k$ in the class of graphs where {\sc $2$-Disjoint Paths} problem is polynomial time solvable.
Given a graph $G$ and an integer $k$, the Feedback Vertex Set (FVS) problem asks if there is a vertex set $T$ of size at most $k$ that hits all cycles in the graph. The fixed-parameter tractability status of FVS in directed graphs was a long-standing open problem until Chen et al. (STOC '08) showed that it is FPT by giving a $4^{k}k!n^{O(1)}$ time algorithm. In the subset versions of this problems, we are given an additional subset $S$ of vertices (resp., edges) and we want to hit all cycles passing through a vertex of $S$ (resp. an edge of $S$). Recently, the Subset Feedback Vertex Set in und…
A mixed graph is a graph with both directed and undirected edges. We present an algorithm for deciding whether a given mixed graph on $n$ vertices contains a feedback vertex set (FVS) of size at most $k$, in time $2^{O(k)}k! O(n^4)$. This is the first fixed parameter tractable algorithm for FVS that applies to both directed and undirected graphs.
A blocking set in a graph $G$ is a subset of vertices that intersects every maximum independent set of $G$. Let ${\sf mmbs}(G)$ be the size of a maximum (inclusion-wise) minimal blocking set of $G$. This parameter has recently played an important role in the kernelization of Vertex Cover parameterized by the distance to a graph class ${\cal F}$. Indeed, it turns out that the existence of a polynomial kernel for this problem is closely related to the property that ${\sf mmbs}({\cal F})=\sup_{G \in {\cal F}}{\sf mmbs}(G)$ is bounded by a constant, and thus several recent results focused on deter…
We prove that Multicut in directed graphs, parameterized by the size of the cutset, is W[1]-hard and hence unlikely to be fixed-parameter tractable even if restricted to instances with only four terminal pairs. This negative result almost completely resolves one of the central open problems in the area of parameterized complexity of graph separation problems, posted originally by Marx and Razgon [SIAM J. Comput. 43(2):355-388 (2014)], leaving only the case of three terminal pairs open. Our gadget methodology allows us also to prove W[1]-hardness of the Steiner Orientation problem parameterized…
We show how to solve directed Laplacian systems in nearly-linear time. Given a linear system in an $n \times n$ Eulerian directed Laplacian with $m$ nonzero entries, we show how to compute an $ε$-approximate solution in time $O(m \log^{O(1)} (n) \log (1/ε))$. Through reductions from [Cohen et al. FOCS'16] , this gives the first nearly-linear time algorithms for computing $ε$-approximate solutions to row or column diagonally dominant linear systems (including arbitrary directed Laplacians) and computing $ε$-approximations to various properties of random walks on directed graphs, including stati…
Disjunctive Answer Set Programming (ASP) is a powerful declarative programming paradigm whose main decision problems are located on the second level of the polynomial hierarchy. Identifying tractable fragments and developing efficient algorithms for such fragments are thus important objectives in order to complement the sophisticated ASP systems available to date. Hard problems can become tractable if some problem parameter is bounded by a fixed constant; such problems are then called fixed-parameter tractable (FPT). While several FPT results for ASP exist, parameters that relate to directed o…
We introduce the concept of shallow directed minors and based on this a new classification of classes of directed graphs which is diametric to existing directed graph decompositions and width measures proposed in the literature. We then study in depth one type of classes of directed graphs which we call nowhere crownful. The classes are very general as they include, on one hand, all classes of directed graphs whose underlying undirected class is nowhere dense, such as planar, bounded-genus, and $H$-minor-free graphs; and on the other hand, also contain classes of high edge density whose underl…
Bhawalkar, Kleinberg, Lewi, Roughgarden, and Sharma [ICALP 2012] introduced the Anchored k-Core problem, where the task is for a given graph G and integers b, k, and p to find an induced subgraph H with at least p vertices (the core) such that all but at most b vertices (called anchors) of H are of degree at least k. In this paper, we extend the notion of k-core to directed graphs and provide a number of new algorithmic and complexity results for the directed version of the problem. We show that - The decision version of the problem is NP-complete for every k>=1 even if the input graph is rest…
We investigate the odd multiway node (edge) cut problem where the input is a graph with a specified collection of terminal nodes and the goal is to find a smallest subset of nonterminal nodes (edges) to delete so that the terminal nodes do not have an odd length path between them. In an earlier work, Lokshtanov and Ramanujan showed that both odd multiway node cut and odd multiway edge cut are fixed-parameter tractable (FPT) when parameterized by the size of the solution in undirected graphs. In this work, we focus on directed acyclic graphs (DAGs) and design a fixed-parameter algorithm. Our ma…
In this paper, we provide faster algorithms for computing various fundamental quantities associated with random walks on a directed graph, including the stationary distribution, personalized PageRank vectors, hitting times, and escape probabilities. In particular, on a directed graph with $n$ vertices and $m$ edges, we show how to compute each quantity in time $\tilde{O}(m^{3/4}n+mn^{2/3})$, where the $\tilde{O}$ notation suppresses polylogarithmic factors in $n$, the desired accuracy, and the appropriate condition number (i.e. the mixing time or restart probability). Our result improves upon …
Given a directed graph, we show how to efficiently find a shortest (directed, simple) cycle on an even number of vertices. As far as we know, no polynomial-time algorithm was previously known for this problem. In fact, finding any even cycle in a directed graph in polynomial time was open for more than two decades until Robertson, Seymour, and Thomas (Ann. of Math. (2) 1999) and, independently, McCuaig (Electron. J. Combin. 2004; announced jointly at STOC 1997) gave an efficiently testable structural characterisation of even-cycle-free directed graphs. Methodologically, our algorithm relies on…
The $d$-bounded-degree vertex deletion problem, to delete at most $k$ vertices in a given graph to make the maximum degree of the remaining graph at most $d$, finds applications in computational biology, social network analysis and some others. It can be regarded as a special case of the $(d+2)$-hitting set problem and generates the famous vertex cover problem. The $d$-bounded-degree vertex deletion problem is NP-hard for each fixed $d\geq 0$. In terms of parameterized complexity, the problem parameterized by $k$ is W[2]-hard for unbounded $d$ and fixed-parameter tractable for each fixed $d\ge…
We consider the following problem called the $k$-Chinese Postman Problem ($k$-CPP): given a connected edge-weighted graph $G$ and integers $p$ and $k$, decide whether there are at least $k$ closed walks such that every edge of $G$ is contained in at least one of them and the total weight of the edges in the walks is at most $p$? The problem $k$-CPP is NP-complete, and van Bevern et al. (to appear) and Sorge (2013) asked whether the $k$-CPP is fixed-parameter tractable when parameterized by $k$. We prove that the $k$-CPP is indeed fixed-parameter tractable. In fact, we prove a stronger result: …
We study the parameterized complexity of the directed variant of the classical {\sc Steiner Tree} problem on various classes of directed sparse graphs. While the parameterized complexity of {\sc Steiner Tree} parameterized by the number of terminals is well understood, not much is known about the parameterization by the number of non-terminals in the solution tree. All that is known for this parameterization is that both the directed and the undirected versions are W[2]-hard on general graphs, and hence unlikely to be fixed parameter tractable FPT. The undirected {\sc Steiner Tree} problem bec…
An out-branching of a directed graph is a rooted spanning tree with all arcs directed outwards from the root. We consider the problem of deciding whether a given directed graph D has an out-branching with at least k leaves (Directed Spanning k-Leaf). We prove that this problem is fixed parameter tractable, when k is chosen as the parameter. Previously this was only known for restricted classes of directed graphs. The main new ingredient in our approach is a lemma that shows that given a locally optimal out-branching of a directed graph in which every arc is part of at least one out-branching, …
In the Directed Feedback Vertex Set (DFVS) problem, the input is a directed graph $D$ on $n$ vertices and $m$ edges, and an integer $k$. The objective is to determine whether there exists a set of at most $k$ vertices intersecting every directed cycle of $D$. Whether or not DFVS admits a fixed parameter tractable (FPT) algorithm was considered the most important open problem in parameterized complexity until Chen, Liu, Lu, O'Sullivan and Razgon [JACM 2008] answered the question in the affirmative. They gave an algorithm for the problem with running time $O(k!4^kk^4nm)$. Since then, no faster a…
An oriented graph is a directed graph without directed 2-cycles. Poljak and Turzík (1986) proved that every connected oriented graph $G$ on $n$ vertices and $m$ arcs contains an acyclic subgraph with at least $\frac{m}{2}+\frac{n-1}{4}$ arcs. Raman and Saurabh (2006) gave another proof of this result and left it as an open question to establish the parameterized complexity of the following problem: does $G$ have an acyclic subgraph with least $\frac{m}{2}+\frac{n-1}{4}+k$ arcs, where $k$ is the parameter? We answer this question by showing that the problem can be solved by an algorithm of runt…
An undirected graph is Eulerian if it is connected and all its vertices are of even degree. Similarly, a directed graph is Eulerian, if for each vertex its in-degree is equal to its out-degree. It is well known that Eulerian graphs can be recognized in polynomial time while the problems of finding a maximum Eulerian subgraph or a maximum induced Eulerian subgraph are NP-hard. In this paper, we study the parameterized complexity of the following Euler subgraph problems: - Large Euler Subgraph: For a given graph G and integer parameter k, does G contain an induced Eulerian subgraph with at least…
The Directed Rural Postman Problem (DRPP) can be formulated as follows: given a strongly connected directed multigraph $D=(V,A)$ with nonnegative integral weights on the arcs, a subset $R$ of $A$ and a nonnegative integer $\ell$, decide whether $D$ has a closed directed walk containing every arc of $R$ and of total weight at most $\ell$. Let $k$ be the number of weakly connected components in the the subgraph of $D$ induced by $R$. Sorge et al. (2012) ask whether the DRPP is fixed-parameter tractable (FPT) when parameterized by $k$, i.e., whether there is an algorithm of running time $O^*(f(k)…
We prove that finding a rooted subtree with at least $k$ leaves in a digraph is a fixed parameter tractable problem. A similar result holds for finding rooted spanning trees with many leaves in digraphs from a wide family $\cal L$ that includes all strong and acyclic digraphs. This settles completely an open question of Fellows and solves another one for digraphs in $\cal L$. Our algorithms are based on the following combinatorial result which can be viewed as a generalization of many results for a `spanning tree with many leaves' in the undirected case, and which is interesting on its own: If…
A directed odd cycle transversal of a directed graph (digraph) $D$ is a vertex set $S$ that intersects every odd directed cycle of $D$. In the Directed Odd Cycle Transversal (DOCT) problem, the input consists of a digraph $D$ and an integer $k$. The objective is to determine whether there exists a directed odd cycle transversal of $D$ of size at most $k$. In this paper, we settle the parameterized complexity of DOCT when parameterized by the solution size $k$ by showing that DOCT does not admit an algorithm with running time $f(k)n^{O(1)}$ unless FPT = W[1]. On the positive side, we give a fac…
The MULTICUT problem, given a graph G, a set of terminal pairs T={(s_i,t_i) | 1 <= i <= r} and an integer p, asks whether one can find a cutset consisting of at most p non-terminal vertices that separates all the terminal pairs, i.e., after removing the cutset, t_i is not reachable from s_i for each 1 <= i <= r. The fixed-parameter tractability of MULTICUT in undirected graphs, parameterized by the size of the cutset only, has been recently proven by Marx and Razgon (STOC'11) and, independently, by Bousquet et al. (STOC'11), after resisting attacks as a long-standing open problem. In this pape…
We consider the following natural "above guarantee" parameterization of the classical Longest Path problem: For given vertices s and t of a graph G, and an integer k, the problem Longest Detour asks for an (s,t)-path in G that is at least k longer than a shortest (s,t)-path. Using insights into structural graph theory, we prove that Longest Detour is fixed-parameter tractable (FPT) on undirected graphs and actually even admits a single-exponential algorithm, that is, one of running time exp(O(k)) poly(n). This matches (up to the base of the exponential) the best algorithms for finding a path o…
Given a directed graph $G$, a set of $k$ terminals and an integer $p$, the \textsc{Directed Vertex Multiway Cut} problem asks if there is a set $S$ of at most $p$ (nonterminal) vertices whose removal disconnects each terminal from all other terminals. \textsc{Directed Edge Multiway Cut} is the analogous problem where $S$ is a set of at most $p$ edges. These two problems indeed are known to be equivalent. A natural generalization of the multiway cut is the \emph{multicut} problem, in which we want to disconnect only a set of $k$ given pairs instead of all pairs. Marx (Theor. Comp. Sci. 2006) sh…
We show a flow-augmentation algorithm in directed graphs: There exists a randomized polynomial-time algorithm that, given a directed graph $G$, two vertices $s,t \in V(G)$, and an integer $k$, adds (randomly) to $G$ a number of arcs such that for every minimal $st$-cut $Z$ in $G$ of size at most $k$, with probability $2^{-\mathrm{poly}(k)}$ the set $Z$ becomes a minimum $st$-cut in the resulting graph. We also provide a deterministic counterpart of this procedure. The directed flow-augmentation tool allows us to prove fixed-parameter tractability of a number of problems parameterized by the ca…
Kimelfeld and Sagiv [Kimelfeld and Sagiv, PODS 2006], [Kimelfeld and Sagiv, Inf. Syst. 2008] pointed out the problem of enumerating $K$-fragments is of great importance in a keyword search on data graphs. In a graph-theoretic term, the problem corresponds to enumerating minimal Steiner trees in (directed) graphs. In this paper, we propose a linear-delay and polynomial-space algorithm for enumerating all minimal Steiner trees, improving on a previous result in [Kimelfeld and Sagiv, Inf. Syst. 2008]. Our enumeration algorithm can be extended to other Steiner problems, such as minimal Steiner for…
Given a directed graph $D$ on $n$ vertices and a positive integer $k$, the Arc-Disjoint Cycle Packing problem is to determine whether $D$ has $k$ arc-disjoint cycles. This problem is known to be W[1]-hard in general directed graphs. In this paper, we initiate a systematic study on the parameterized complexity of the problem restricted to tournaments. We show that the problem is fixed-parameter tractable and admits a polynomial kernel when parameterized by the solution size $k$. In particular, we show that it can be solved in $2^{\mathcal{O}(k \log k)} n^{\mathcal{O}(1)}$ time and has a kernel …
We study two "above guarantee" versions of the classical Longest Path problem on undirected and directed graphs and obtain the following results. In the first variant of Longest Path that we study, called Longest Detour, the task is to decide whether a graph has an (s,t)-path of length at least dist_G(s,t)+k (where dist_G(s,t) denotes the length of a shortest path from s to t). Bezáková et al. proved that on undirected graphs the problem is fixed-parameter tractable (FPT) by providing an algorithm of running time 2^{O (k)} n. Further, they left the parameterized complexity of the problem on di…
An out-tree $T$ of a directed graph $D$ is a rooted tree subgraph with all arcs directed outwards from the root. An out-branching is a spanning out-tree. By $l(D)$ and $l_s(D)$ we denote the maximum number of leaves over all out-trees and out-branchings of $D$, respectively. We give fixed parameter tractable algorithms for deciding whether $l_s(D)\geq k$ and whether $l(D)\geq k$ for a digraph $D$ on $n$ vertices, both with time complexity $2^{O(k\log k)} \cdot n^{O(1)}$. This improves on previous algorithms with complexity $2^{O(k^3\log k)} \cdot n^{O(1)}$ and $2^{O(k\log^2 k)} \cdot n^{O(1)}$…
Mathematical modeling is a standard approach to solve many real-world problems and {\em diversity} of solutions is an important issue, emerging in applying solutions obtained from mathematical models to real-world problems. Many studies have been devoted to finding diverse solutions. Baste et al. (Algorithms 2019, IJCAI 2020) recently initiated the study of computing diverse solutions of combinatorial problems from the perspective of fixed-parameter tractability. They considered problems of finding $r$ solutions that maximize some diversity measures (the minimum or sum of the pairwise Hamming …
Fixed-parameter algorithms and kernelization are two powerful methods to solve $\mathsf{NP}$-hard problems. Yet, so far those algorithms have been largely restricted to static inputs. In this paper we provide fixed-parameter algorithms and kernelizations for fundamental $\mathsf{NP}$-hard problems with dynamic inputs. We consider a variety of parameterized graph and hitting set problems which are known to have $f(k)n^{1+o(1)}$ time algorithms on inputs of size $n$, and we consider the question of whether there is a data structure that supports small updates (such as edge/vertex/set/element ins…
