This paper studies fitness inheritance as an efficiency enhancement technique for a class of competent genetic algorithms called estimation distribution algorithms. Probabilistic models of important sub-solutions are developed to estimate the fitness of a proportion of individuals in the population, thereby avoiding computationally expensive function evaluations. The effect of fitness inheritance on the convergence time and population sizing are modeled and the speed-up obtained through inheritance is predicted. The results show that a fitness-inheritance mechanism which utilizes information on building-block fitnesses provides significant efficiency enhancement. For additively separable problems, fitness inheritance reduces the number of function evaluations to about half and yields a speed-up of about 1.75--2.25.
This paper concerns applications of genetic algorithms and genetic programming to tasks for which it is difficult to find a representation that does not map to a highly complex and discontinuous fitness landscape. In such cases the standard algorithm is prone to getting trapped in local extremes. The paper proposes several adaptive mechanisms that are useful in preventing the search from getting trapped.
Credit card fraud detection based on machine learning has recently attracted considerable interest from the research community. One of the most important tasks in this area is the ability of classifiers to handle the imbalance in credit card data. In this scenario, classifiers tend to yield poor accuracy on the fraud class (minority class) despite realizing high overall accuracy. This is due to the influence of the majority class on traditional training criteria. In this paper, we aim to apply genetic programming to address this issue by adapting existing fitness functions. We examine two fitn…
The paper presents a solution for the problem of choosing a method for analytical determining of weight factors for a genetic algorithm additive fitness function. This algorithm is the basis for an evolutionary process, which forms a stable and effective query population in a search engine to obtain highly relevant results. The paper gives a formal description of an algorithm fitness function, which is a weighted sum of three heterogeneous criteria. The selected methods for analytical determining of weight factors are described in detail. It is noted that expert assessment methods are impossib…
Genetic programming is an often-used technique for symbolic regression: finding symbolic expressions that match data from an unknown function. To make the symbolic regression more efficient, one can also use dimensionally-aware genetic programming that constrains the physical units of the equation. Nevertheless, there is no formal analysis of how much dimensionality awareness helps in the regression process. In this paper, we conduct a fitness landscape analysis of dimensionallyaware genetic programming search spaces on a subset of equations from Richard Feynmans well-known lectures. We define…
When genetic algorithms are used to evolve decision trees, key tree quality parameters can be recursively computed and re-used across generations of partially similar decision trees. Simply storing instance indices at leaves is enough for fitness to be piecewise computed in a lossless fashion. We show the derivation of the (substantial) expected speed-up on two bounding case problems and trace the attractive property of lossless fitness inheritance to the divide-and-conquer nature of decision trees. The theoretical results are supported by experimental evidence.
Genetic algorithms have been used in recent decades to solve a broad variety of search problems. These algorithms simulate natural selection to explore a parameter space in search of solutions for a broad variety of problems. In this paper, we explore the effects of introducing temporal heterogeneity in genetic algorithms. In particular, we set the crossover probability to be inversely proportional to the individual's fitness, i.e., better solutions change slower than those with a lower fitness. As case studies, we apply heterogeneity to solve the $N$-Queens and Traveling Salesperson problems.…
We demonstrate a genetic algorithm that employs a versatile fitness function to optimize route selection for the Hyperloop, a proposed high speed passenger transportation system.
GoTools is a program which solves life & death problems in the game of Go. This paper describes experiments using a Genetic Algorithm to optimize heuristic weights used by GoTools' tree-search. The complete set of heuristic weights is composed of different subgroups, each of which can be optimized with a suitable fitness function. As a useful side product, an MPI interface for FreePascal was implemented to allow the use of a parallelized fitness function running on a Beowulf cluster. The aim of this exercise is to optimize the current version of GoTools, and to make tools available in preparat…
Traditionally Genetic Algorithm has been used for optimization of unimodal and multimodal functions. Earlier researchers worked with constant probabilities of GA control operators like crossover, mutation etc. for tuning the optimization in specific domains. Recent advancements in this field witnessed adaptive approach in probability determination. In Adaptive mutation primarily poor individuals are utilized to explore state space, so mutation probability is usually generated proportionally to the difference between fitness of best chromosome and itself (fMAX - f). However, this approach is su…
This paper presents two different efficiency-enhancement techniques for probabilistic model building genetic algorithms. The first technique proposes the use of a mutation operator which performs local search in the sub-solution neighborhood identified through the probabilistic model. The second technique proposes building and using an internal probabilistic model of the fitness along with the probabilistic model of variable interactions. The fitness values of some offspring are estimated using the probabilistic model, thereby avoiding computationally expensive function evaluations. The scalab…
We introduce a new parameter to discuss the behavior of a genetic algorithm. This parameter is the mean number of exact copies of the best fit chromosomes from one generation to the next. We argue that the genetic algorithm should operate efficiently when this parameter is slightly larger than $1$. We consider the case of the simple genetic algorithm with the roulette--wheel selection mechanism. We denote by $\ell$ the length of the chromosomes, by $m$ the population size, by $p_C$ the crossover probability and by $p_M$ the mutation probability. We start the genetic algorithm with an initial p…
The $(1+(λ,λ))$ genetic algorithm, first proposed at GECCO 2013, showed a surprisingly good performance on so me optimization problems. The theoretical analysis so far was restricted to the OneMax test function, where this GA profited from the perfect fitness-distance correlation. In this work, we conduct a rigorous runtime analysis of this GA on random 3-SAT instances in the planted solution model having at least logarithmic average degree, which are known to have a weaker fitness distance correlation. We prove that this GA with fixed not too large population size again obtains runtimes bette…
Most real-world optimization problems are difficult to solve with traditional statistical techniques or with metaheuristics. The main difficulty is related to the existence of a considerable number of local optima, which may result in the premature convergence of the optimization process. To address this problem, we propose a novel heuristic method for constructing a smooth surrogate model of the original function. The surrogate function is easier to optimize but maintains a fundamental property of the original rugged fitness landscape: the location of the global optimum. To create such a surr…
Learning ensembles by bagging can substantially improve the generalization performance of low-bias, high-variance estimators, including those evolved by Genetic Programming (GP). To be efficient, modern GP algorithms for evolving (bagging) ensembles typically rely on several (often inter-connected) mechanisms and respective hyper-parameters, ultimately compromising ease of use. In this paper, we provide experimental evidence that such complexity might not be warranted. We show that minor changes to fitness evaluation and selection are sufficient to make a simple and otherwise-traditional GP al…
Recently we proposed a general, ensemble-based feature engineering wrapper (FEW) that was paired with a number of machine learning methods to solve regression problems. Here, we adapt FEW for supervised classification and perform a thorough analysis of fitness and survival methods within this framework. Our tests demonstrate that two fitness metrics, one introduced as an adaptation of the silhouette score, outperform the more commonly used Fisher criterion. We analyze survival methods and demonstrate that $ε$-lexicase survival works best across our test problems, followed by random survival wh…
The weekly maintenance schedule specifies when maintenance activities should be performed on the equipment, taking into account the availability of workers and maintenance bays, and other operational constraints. The current approach to generating this schedule is labour intensive and requires coordination between the maintenance schedulers and operations staff to minimise its impact on the operation of the mine. This paper presents methods for automatically generating this schedule from the list of maintenance tasks to be performed, the availability roster of the maintenance staff, and time w…
When seeking a predictive model in biomedical data, one often has more than a single objective in mind, e.g., attaining both high accuracy and low complexity (to promote interpretability). We investigate herein whether multiple objectives can be dynamically tuned by our recently proposed coevolutionary algorithm, SAFE (Solution And Fitness Evolution). We find that SAFE is able to automatically tune accuracy and complexity with no performance loss, as compared with a standard evolutionary algorithm, over complex simulated genetics datasets produced by the GAMETES tool.
The large number of exact fitness function evaluations makes evolutionary algorithms to have computational cost. In some real-world problems, reducing number of these evaluations is much more valuable even by increasing computational complexity and spending more time. To fulfill this target, we introduce an effective factor, in spite of applied factor in Adaptive Fuzzy Fitness Granulation with Non-dominated Sorting Genetic Algorithm-II, to filter out worthless individuals more precisely. Our proposed approach is compared with respect to Adaptive Fuzzy Fitness Granulation with Non-dominated Sor…
In evolutionary algorithms, genetic operators iteratively generate new offspring which constitute a potentially valuable set of search history. To boost the performance of crossover in real-coded genetic algorithm (RCGA), in this paper we propose to exploit the search history cached so far in an online style during the iteration. Specifically, survivor individuals over past few generations are collected and stored in the archive to form the search history. We introduce a simple yet effective crossover model driven by the search history (abbreviated as SHX). In particular, the search history is…
This paper presents an analysis of building blocks propagation in Quantum-Inspired Genetic Algorithm, which belongs to a new class of metaheuristics drawing their inspiration from both biological evolution and unitary evolution of quantum systems. The expected number of quantum chromosomes matching a schema has been analyzed and a random variable corresponding to this issue has been introduced. The results have been compared with Simple Genetic Algorithm. Also, it has been presented how selected binary quantum chromosomes cover a domain of one-dimensional fitness function.
Leiden University Medical Center（莱顿大学医学中心）；Centrum Wiskunde & Informatica（荷兰国家数学与计算机科学研究所）
Dimensionality reduction (DR) is an important technique for data exploration and knowledge discovery. However, most of the main DR methods are either linear (e.g., PCA), do not provide an explicit mapping between the original data and its lower-dimensional representation (e.g., MDS, t-SNE, isomap), or produce mappings that cannot be easily interpreted (e.g., kernel PCA, neural-based autoencoder). Recently, genetic programming (GP) has been used to evolve interpretable DR mappings in the form of symbolic expressions. There exists a number of ways in which GP can be used to this end and no study…
Random sample consensus (RANSAC) is a successful algorithm in model fitting applications. It is vital to have strong exploration phase when there are an enormous amount of outliers within the dataset. Achieving a proper model is guaranteed by pure exploration strategy of RANSAC. However, finding the optimum result requires exploitation. GASAC is an evolutionary paradigm to add exploitation capability to the algorithm. Although GASAC improves the results of RANSAC, it has a fixed strategy for balancing between exploration and exploitation. In this paper, a new paradigm is proposed based on gene…
When evolution algorithms are used to unfold the neutron energy spectrum, fitness function design is an important fundamental work for evaluating the quality of the solution, but it has not attracted much attention. In this work, we investigated the performance of eight fitness functions attached to the genetic algorithm (GA) and the differential evolution algorithm (DEA) used for unfolding four neutron spectra selected from the IAEA 403 report. Experiments show that the fitness functions with a maximum in the GA can limit the ability of the population to percept the fitness change, but the ab…
Machine Learning (ML) is becoming increasingly important in daily life. In this context, Artificial Neural Networks (ANNs) are a popular approach within ML methods to realize an artificial intelligence. Usually, the topology of ANNs is predetermined. However, there are problems where it is difficult to find a suitable topology. Therefore, Topology and Weight Evolving Artificial Neural Network (TWEANN) algorithms have been developed that can find ANN topologies and weights using genetic algorithms. A well-known downside for large-scale problems is that TWEANN algorithms often evolve inefficient…
The paper is devoted to upper bounds on the expected first hitting times of the sets of local or global optima for non-elitist genetic algorithms with very high selection pressure. The results of this paper extend the range of situations where the upper bounds on the expected runtime are known for genetic algorithms and apply, in particular, to the Canonical Genetic Algorithm. The obtained bounds do not require the probability of fitness-decreasing mutation to be bounded by a constant less than one.
Throughout the course of the development of Particle Swarm Optimization, particle inertia has been established as an important aspect of the method for researching possible method improvements. As a continuation of our previous research, we propose a novel generalized technique of inertia weight adaptation based on individual particle's fitness improvement, called anakatabatic inertia. This technique allows for adapting inertia weight value for each particle corresponding to the particle's increasing or decreasing fitness, i.e. conditioned by particle's ascending (anabatic) or descending (kata…
We continue the study of Genetic Algorithms (GA) on combinatorial optimization problems where the candidate solutions need to satisfy a balancedness constraint. It has been observed that the reduction of the search space size granted by ad-hoc crossover and mutation operators does not usually translate to a substantial improvement of the GA performances. There is still no clear explanation of this phenomenon, although it is suspected that a balanced representation might yield a more irregular fitness landscape, where it could be more difficult for GA to converge to a global optimum. In this pa…
In this paper a Metaheuristic approach for solving the N-Queens Problem is introduced to find the best possible solution in a reasonable amount of time. Genetic Algorithm is used with a novel fitness function as the Metaheuristic. The aim of N-Queens Problem is to place N queens on an N x N chessboard, in a way so that no queen is in conflict with the others. Chromosome representation and genetic operations like Mutation and Crossover are described in detail. Results show that this approach yields promising and satisfactory results in less time compared to that obtained from the previous appro…
Universidade de Lisboa（里斯本大学）；NOVA Information Management School (NOVA IMS)（新里斯本大学信息管理学院）；Universidade Nova de Lisboa（新里斯本大学）
Fitness landscapes are a useful concept to study the dynamics of meta-heuristics. In the last two decades, they have been applied with success to estimate the optimization power of several types of evolutionary algorithms, including genetic algorithms and genetic programming. However, so far they have never been used to study the performance of machine learning algorithms on unseen data, and they have never been applied to neuroevolution. This paper aims at filling both these gaps, applying for the first time fitness landscapes to neuroevolution and using them to infer useful information about…
We recently reported that the simple genetic algorithm (SGA) is capable of performing a remarkable form of sublinear computation which has a straightforward connection with the general problem of interacting attributes in data-mining. In this paper we explain how the SGA can leverage this computational proficiency to perform efficient adaptation on a broad class of fitness functions. Based on the relative ease with which a practical fitness function might belong to this broad class, we submit a new hypothesis about the workings of genetic algorithms. We explain why our hypothesis is superior t…
The computational complexity analysis of genetic programming (GP) has been started recently by analyzing simple (1+1) GP algorithms for the problems ORDER and MAJORITY. In this paper, we study how taking the complexity as an additional criteria influences the runtime behavior. We consider generalizations of ORDER and MAJORITY and present a computational complexity analysis of (1+1) GP using multi-criteria fitness functions that take into account the original objective and the complexity of a syntax tree as a secondary measure. Furthermore, we study the expected time until population-based mult…
This paper considers the two-stage capacitated facility location problem (TSCFLP) in which products manufactured in plants are delivered to customers via storage depots. Customer demands are satisfied subject to limited plant production and limited depot storage capacity. The objective is to determine the locations of plants and depots in order to minimize the total cost including the fixed cost and transportation cost. A hybrid evolutionary algorithm (HEA) with genetic operations and local search is proposed. To avoid the expensive calculation of fitness of population in terms of computationa…
This paper presents a cumulative multi-niching genetic algorithm (CMN GA), designed to expedite optimization problems that have computationally-expensive multimodal objective functions. By never discarding individuals from the population, the CMN GA makes use of the information from every objective function evaluation as it explores the design space. A fitness-related population density control over the design space reduces unnecessary objective function evaluations. The algorithm's novel arrangement of genetic operations provides fast and robust convergence to multiple local optima. Benchmark…
Wagner's modularity inducing problem domain is a key contribution to the study of the evolution of modularity, including both evolutionary theory and evolutionary computation. We study its behavior under classical genetic algorithms. Unlike what we seem to observe in nature, the emergence of modularity is highly conditional and dependent, for example, on the eagerness of search. In nature, modular solutions generally dominate populations, whereas in this domain, modularity, when it emerges, is a relatively rare variant. Emergence of modularity depends heavily on random fluctuations in the fitn…
This paper introduces PyGAD, an open-source easy-to-use Python library for building the genetic algorithm. PyGAD supports a wide range of parameters to give the user control over everything in its life cycle. This includes, but is not limited to, population, gene value range, gene data type, parent selection, crossover, and mutation. PyGAD is designed as a general-purpose optimization library that allows the user to customize the fitness function. Its usage consists of 3 main steps: build the fitness function, create an instance of the pygad.GA class, and calling the pygad.GA.run() method. The…
In this paper we analyze the cryptanalysis of the simplified data encryption standard algorithm using meta-heuristics and in particular genetic algorithms. The classic fitness function when using such an algorithm is to compare n-gram statistics of a the decrypted message with those of the target message. We show that using such a function is irrelevant in case of Genetic Algorithm, simply because there is no correlation between the distance to the real key (the optimum) and the value of the fitness, in other words, there is no hidden gradient. In order to emphasize this assumption we experime…
This paper describes the software implementation of genetic algorithm for identifying and selecting most relevant results received during sequentially executed subject search operations. Simulated evolutionary process generates sustainable and effective population of search queries, forms search pattern of documents or semantic core, creates relevant sets of required documents, allows automatic classification of search results. The paper discusses the features of subject search, justifies the use of a genetic algorithm, describes arguments of the fitness function and describes basic steps and …
Complutense University of Madrid（马德里康普顿斯大学）；University of Nottingham（诺丁汉大学）
We propose a variation of the standard genetic algorithm that incorporates social interaction between the individuals in the population. Our goal is to understand the evolutionary role of social systems and its possible application as a non-genetic new step in evolutionary algorithms. In biological populations, ie animals, even human beings and microorganisms, social interactions often affect the fitness of individuals. It is conceivable that the perturbation of the fitness via social interactions is an evolutionary strategy to avoid trapping into local optimum, thus avoiding a fast convergenc…
Multi-Representation Genetic Programming: A Case Study on Tree-based and Linear Representations
Centre for Data Science and Artificial Intelligence & School of Engineering and Computer Science, Victoria University of Wellington（数据科学与人工智能中心及工程与计算机科学学院，维多利亚大学）
A genetic algorithm (GA) is a search-based optimization technique based on the principles of Genetics and Natural Selection. We present an algorithm which enhances the classical GA with input from quantum annealers. As in a classical GA, the algorithm works by breeding a population of possible solutions based on their fitness. However, the population of individuals is defined by the continuous couplings on the quantum annealer, which then give rise via quantum annealing to the set of corresponding phenotypes that represent attempted solutions. This introduces a form of directed mutation into t…
It is still unclear how an evolutionary algorithm (EA) searches a fitness landscape, and on what fitness landscapes a particular EA will do well. The validity of the building-block hypothesis, a major tenet of traditional genetic algorithm theory, remains controversial despite its continued use to justify claims about EAs. This paper outlines a research program to begin to answer some of these open questions, by extending the work done in the royal road project. The short-term goal is to find a simple class of functions which the simple genetic algorithm optimizes better than other optimizatio…
This paper combines the idea of a hierarchical distributed genetic algorithm with different inter-agent partnering strategies. Cascading clusters of sub-populations are built from bottom up, with higher-level sub-populations optimising larger parts of the problem. Hence higher-level sub-populations search a larger search space with a lower resolution whilst lower-level sub-populations search a smaller search space with a higher resolution. The effects of different partner selection schemes for (sub-)fitness evaluation purposes are examined for two multiple-choice optimisation problems. It is s…
In this paper we present a novel genetic algorithm (GA) solution to a simple yet challenging commercial puzzle game known as the Zen Puzzle Garden (ZPG). We describe the game in detail, before presenting a suitable encoding scheme and fitness function for candidate solutions. We then compare the performance of the genetic algorithm with that of the A* algorithm. Our results show that the GA is competitive with informed search in terms of solution quality, and significantly out-performs it in terms of computational resource requirements. We conclude with a brief discussion of the implications o…
Multi-population Ensemble Genetic Programming via Cooperative Coevolution and Multi-view Learning for Classification
Faculty of Engineering & Information Technology, University of Technology Sydney（工程与信息科技学院，技术悉尼大学）；Department of Civil and Architectural Engineering, Sultan Qaboos University（土木与建筑工程系，苏丹·卡布斯大学）；University Research and Innovation Center (EKIK), Obuda University（研究与创新中心（EKIK），奥布达大学）
