To support minimally-invasive intraoperative mitral valve repair, quantitative measurements from the valve can be obtained using an infra-red tracked stylus. It is desirable to view such manually measured points together with the endoscopic image for further assistance. Therefore, hand-eye calibration is required that links both coordinate systems and is a prerequisite to project the points onto the image plane. A complementary approach to this is to use a vision-based endoscopic stereo-setup to detect and triangulate points of interest, to obtain the 3D coordinates. In this paper, we aim to compare both approaches on a rigid phantom and two patient-individual silicone replica which resemble the intraoperative scenario. The preliminary results indicate that 3D landmark estimation, either labeled manually or through partly automated detection with a deep learning approach, provides more accurate triangulated depth measurements when performed with a tailored image-based method than with stylus measurements.
The Johns Hopkins University(约翰斯·霍普金斯大学);Johns Hopkins Medical Institutions(约翰斯·霍普金斯医疗机构)
We present a self-supervised approach to training convolutional neural networks for dense depth estimation from monocular endoscopy data without a priori modeling of anatomy or shading. Our method only requires sequential data from monocular endoscopic videos and a multi-view stereo reconstruction method, e.g. structure from motion, that supervises learning in a sparse but accurate manner. Consequently, our method requires neither manual interaction, such as scaling or labeling, nor patient CT in the training and application phases. We demonstrate the performance of our method on sinus endosco…
Johns Hopkins University(约翰斯·霍普金斯大学);Philips Research(飞利浦研究院);Johns Hopkins Medical Institutions(约翰斯·霍普金斯医疗机构);Facebook(脸书)
We present a self-supervised approach to training convolutional neural networks for dense depth estimation from monocular endoscopy data without a priori modeling of anatomy or shading. Our method only requires monocular endoscopic videos and a multi-view stereo method, e.g., structure from motion, to supervise learning in a sparse manner. Consequently, our method requires neither manual labeling nor patient computed tomography (CT) scan in the training and application phases. In a cross-patient experiment using CT scans as groundtruth, the proposed method achieved submillimeter mean residual …
Instituto de Investigación en Ingeniería de Aragón (I3A)(阿拉贡工程研究所(I3A));Universidad de Zaragoza(萨拉戈萨大学)
Visual SLAM inside the human body will open the way to computer-assisted navigation in endoscopy. However, due to space limitations, medical endoscopes only provide monocular images, leading to systems lacking true scale. In this paper, we exploit the controlled lighting in colonoscopy to achieve the first in-vivo 3D reconstruction of the human colon using photometric stereo on a calibrated monocular endoscope. Our method works in a real medical environment, providing both a suitable in-place calibration procedure and a depth estimation technique adapted to the colon's tubular geometry. We val…
Institute of Neuroinformatics, University of Zurich and ETH Zurich(苏黎世大学与苏黎世联邦理工学院神经信息学研究所)
The stereo-matching problem, i.e., matching corresponding features in two different views to reconstruct depth, is efficiently solved in biology. Yet, it remains the computational bottleneck for classical machine vision approaches. By exploiting the properties of event cameras, recently proposed Spiking Neural Network (SNN) architectures for stereo vision have the potential of simplifying the stereo-matching problem. Several solutions that combine event cameras with spike-based neuromorphic processors already exist. However, they are either simulated on digital hardware or tested on simplified…
ETH Zürich(苏黎世联邦理工学院);Google Research(谷歌研究院);KU Leuven(鲁汶大学)
We present a modern solution to the multi-view photometric stereo problem (MVPS). Our work suitably exploits the image formation model in a MVPS experimental setup to recover the dense 3D reconstruction of an object from images. We procure the surface orientation using a photometric stereo (PS) image formation model and blend it with a multi-view neural radiance field representation to recover the object's surface geometry. Contrary to the previous multi-staged framework to MVPS, where the position, iso-depth contours, or orientation measurements are estimated independently and then fused late…
Bogazici University(博阿齐奇大学);University of Oxford(牛津大学);Brigham and Women’s Hospital(布莱根妇女医院);Harvard Medical School(哈佛医学院);Dana Farber Cancer Institute(丹娜-法伯癌症研究所);Broad Institute of Harvard and MIT(哈佛-麻省理工学院布罗德研究所);Johns Hopkins University(约翰斯·霍普金斯大学);Louisiana State University(路易斯安那州立大学)
Current capsule endoscopes and next-generation robotic capsules for diagnosis and treatment of gastrointestinal diseases are complex cyber-physical platforms that must orchestrate complex software and hardware functions. The desired tasks for these systems include visual localization, depth estimation, 3D mapping, disease detection and segmentation, automated navigation, active control, path realization and optional therapeutic modules such as targeted drug delivery and biopsy sampling. Data-driven algorithms promise to enable many advanced functionalities for capsule endoscopes, but real-worl…
ShanghaiTech University(上海科技大学);University of Delaware(特拉华大学)
Depth from defocus (DfD) and stereo matching are two most studied passive depth sensing schemes. The techniques are essentially complementary: DfD can robustly handle repetitive textures that are problematic for stereo matching whereas stereo matching is insensitive to defocus blurs and can handle large depth range. In this paper, we present a unified learning-based technique to conduct hybrid DfD and stereo matching. Our input is image triplets: a stereo pair and a defocused image of one of the stereo views. We first apply depth-guided light field rendering to construct a comprehensive traini…
In this paper, we propose a novel end-to-end deep neural network model for omnidirectional depth estimation from a wide-baseline multi-view stereo setup. The images captured with ultra wide field-of-view (FOV) cameras on an omnidirectional rig are processed by the feature extraction module, and then the deep feature maps are warped onto the concentric spheres swept through all candidate depths using the calibrated camera parameters. The 3D encoder-decoder block takes the aligned feature volume to produce the omnidirectional depth estimate with regularization on uncertain regions utilizing the …
Stereo vision is an effective technique for depth estimation with broad applicability in autonomous urban and highway driving. While various deep learning-based approaches have been developed for stereo, the input data from a binocular setup with a fixed baseline are limited. Addressing such a problem, we present an end-to-end network for processing the data from a trinocular setup, which is a combination of a narrow and a wide stereo pair. In this design, two pairs of binocular data with a common reference image are treated with shared weights of the network and a mid-level fusion. We also pr…
Visibility underwater is challenging, and degrades as the distance between the subject and camera increases, making vision tasks in the forward-looking direction more difficult. We have collected underwater forward-looking stereo-vision and visual-inertial image sets in the Mediterranean and Red Sea. To our knowledge there are no other public datasets in the underwater environment acquired with this camera-sensor orientation published with ground-truth. These datasets are critical for the development of several underwater applications, including obstacle avoidance, visual odometry, 3D tracking…
We study how autonomous robots can learn by themselves to improve their depth estimation capability. In particular, we investigate a self-supervised learning setup in which stereo vision depth estimates serve as targets for a convolutional neural network (CNN) that transforms a single still image to a dense depth map. After training, the stereo and mono estimates are fused with a novel fusion method that preserves high confidence stereo estimates, while leveraging the CNN estimates in the low-confidence regions. The main contribution of the article is that it is shown that the fused estimates …
EvalMVX: A Unified Benchmarking for Neural 3D Reconstruction under Diverse Multiview Setups
Beijing University of Posts and Telecommunications(北京邮电大学);School of Mechanical Engineering, Shanghai Jiao Tong University(上海交通大学机械工程学院);Xiong’an Aerospace Information Research Institute(雄安航空航天信息研究所);State Key Laboratory of Multimedia Information Processing, School of Computer Science Peking University(北京大学计算机科学学院多媒体信息处理国家重点实验室)
Obtaining accurate depth measurements out of a single image represents a fascinating solution to 3D sensing. CNNs led to considerable improvements in this field, and recent trends replaced the need for ground-truth labels with geometry-guided image reconstruction signals enabling unsupervised training. Currently, for this purpose, state-of-the-art techniques rely on images acquired with a binocular stereo rig to predict inverse depth (i.e., disparity) according to the aforementioned supervision principle. However, these methods suffer from well-known problems near occlusions, left image border…
University of Zurich(苏黎世大学);Italian Institute of Technology(意大利理工学院)
In this paper, we address the problem of dense 3D reconstruction from multiple view images subject to strong lighting variations. In this regard, a new piecewise framework is proposed to explicitly take into account the change of illumination across several wide-baseline images. Unlike multi-view stereo and multi-view photometric stereo methods, this pipeline deals with wide-baseline images that are uncalibrated, in terms of both camera parameters and lighting conditions. Such a scenario is meant to avoid use of any specific imaging setup and provide a tool for normal users without any experti…
Institute of Biomedical Engineering, Bogazici University(波加兹奇大学生物医学工程研究所);Computer Science Department, University of Oxford(牛津大学计算机科学系);Brigham and Women’s Hospital, Harvard Medical School(哈佛医学院布莱根妇女医院);Cancer Data Science, Dana Farber Cancer Institute(丹娜-法伯癌症研究所癌症数据科学部);Cancer Program, Broad Institute of Harvard and MIT(哈佛-麻省理工学院布罗德研究所癌症项目);Institute for Systems and Robotics, University of Coimbra(科英布拉大学系统与机器人研究所);Faculty of Medicine, Clinical Academic Center of Coimbra, University of Coimbra(科英布拉大学科英布拉临床学术中心医学院);Department of Biomedical Engineering, Johns Hopkins University(约翰霍普金斯大学生物医学工程系)
Deep learning techniques hold promise to develop dense topography reconstruction and pose estimation methods for endoscopic videos. However, currently available datasets do not support effective quantitative benchmarking. In this paper, we introduce a comprehensive endoscopic SLAM dataset consisting of 3D point cloud data for six porcine organs, capsule and standard endoscopy recordings as well as synthetically generated data. A Panda robotic arm, two commercially available capsule endoscopes, two conventional endoscopes with different camera properties, and two high precision 3D scanners were…
Single-Shot Metric Depth from Focused Plenoptic Cameras
Institute of Robotics and Mechatronics, German Aerospace Center (DLR)(德国航空航天中心机器人与机电一体化研究所);I3A, Universidad de Zaragoza(萨拉戈萨大学I3A研究所);Karlsruhe Institute of Technology(卡尔斯鲁厄理工学院)
We present a method to capture both 3D shape and spatially varying reflectance with a multi-view photometric stereo (MVPS) technique that works for general isotropic materials. Our algorithm is suitable for perspective cameras and nearby point light sources. Our data capture setup is simple, which consists of only a digital camera, some LED lights, and an optional automatic turntable. From a single viewpoint, we use a set of photometric stereo images to identify surface points with the same distance to the camera. We collect this information from multiple viewpoints and combine it with structu…
Sensor setups consisting of a combination of 3D range scanner lasers and stereo vision systems are becoming a popular choice for on-board perception systems in vehicles; however, the combined use of both sources of information implies a tedious calibration process. We present a method for extrinsic calibration of lidar-stereo camera pairs without user intervention. Our calibration approach is aimed to cope with the constraints commonly found in automotive setups, such as low-resolution and specific sensor poses. To demonstrate the performance of our method, we also introduce a novel approach f…
Supervised deep learning often suffers from the lack of sufficient training data. Specifically in the context of monocular depth map prediction, it is barely possible to determine dense ground truth depth images in realistic dynamic outdoor environments. When using LiDAR sensors, for instance, noise is present in the distance measurements, the calibration between sensors cannot be perfect, and the measurements are typically much sparser than the camera images. In this paper, we propose a novel approach to depth map prediction from monocular images that learns in a semi-supervised way. While we…
Recent advances in self-supervised learning havedemonstrated that it is possible to learn accurate monoculardepth reconstruction from raw video data, without using any 3Dground truth for supervision. However, in robotics applications,multiple views of a scene may or may not be available, depend-ing on the actions of the robot, switching between monocularand multi-view reconstruction. To address this mixed setting,we proposed a new approach that extends any off-the-shelfself-supervised monocular depth reconstruction system to usemore than one image at test time. Our method builds on astandard p…
In this paper, we present an omnidirectional localization and dense mapping system for a wide-baseline multiview stereo setup with ultra-wide field-of-view (FOV) fisheye cameras, which has a 360 degrees coverage of stereo observations of the environment. For more practical and accurate reconstruction, we first introduce improved and light-weighted deep neural networks for the omnidirectional depth estimation, which are faster and more accurate than the existing networks. Second, we integrate our omnidirectional depth estimates into the visual odometry (VO) and add a loop closing module for glo…
Photometric stereo (PS) is a fundamental technique in computer vision known to produce 3-D shape with high accuracy. The setting of PS is defined by using several input images of a static scene taken from one and the same camera position but under varying illumination. The vast majority of studies in this 3-D reconstruction method assume orthographic projection for the camera model. In addition, they mainly consider the Lambertian reflectance model as the way that light scatters at surfaces. So, providing reliable PS results from real world objects still remains a challenging task. We address …
Field Tracking of Insects Using a Stereoscopic Event-Based Camera Setup
University of New South Wales(新南威尔士大学);Wageningen University & Research(瓦赫宁根大学及研究中心);DEVCOM Army Research Lab(DEVCOM陆军研究实验室);University of Queensland(昆士兰大学)
Weizmann Institute of Science(魏茨曼科学研究学院);NVIDIA Research(英伟达研究院)
Existing deep methods produce highly accurate 3D reconstructions in stereo and multiview stereo settings, i.e., when cameras are both internally and externally calibrated. Nevertheless, the challenge of simultaneous recovery of camera poses and 3D scene structure in multiview settings with deep networks is still outstanding. Inspired by projective factorization for Structure from Motion (SFM) and by deep matrix completion techniques, we propose a neural network architecture that, given a set of point tracks in multiple images of a static scene, recovers both the camera parameters and a (sparse…
Robust Real-Time Endoscopic Stereo Matching under Fuzzy Tissue Boundaries
The School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai 200240, China(生物医学工程学院,上海交通大学);Innovation Center for Electronic Design Automation Technology, Hangzhou Dianzi University, Hangzhou 310018, China(电子设计自动化技术创新中心,杭州电子科技大学)
EndoFlow-SLAM: Real-Time Endoscopic SLAM with Flow-Constrained Gaussian Splatting
School of Advanced Technology, Xi'an Jiaotong Liverpool University(西安交通大学利物浦大学先进技术学院);School of AI and Advanced Computing, Xi'an Jiaotong Liverpool University(西安交通大学利物浦大学人工智能与高级计算学院);School of Physical Sciences, University of Liverpool(利物浦大学物理科学学院);The Hong Kong University of Science and Technology (Guangzhou)(香港科技大学(广州))
Scene flow is the task of estimating 3D motion vectors to individual points of a dynamic 3D scene. Motion vectors have shown to be beneficial for downstream tasks such as action classification and collision avoidance. However, data collected via LiDAR sensors and stereo cameras are computation and labor intensive to precisely annotate for scene flow. We address this annotation bottleneck on two ends. We propose a 3D scene flow benchmark and a novel self-supervised setup for training flow models. The benchmark consists of datasets designed to study individual aspects of flow estimation in progr…
Universitat Politècnica de Catalunya(加泰罗尼亚理工大学);Idneo Inc.(Idneo公司)
This article explores a face recognition alternative which seeks to contribute to resolve current security vulnerabilities in most recognition architectures. Current low cost facial authentication software in the market can be fooled by a printed picture of a face due to the lack of depth information. The presented software creates a depth map of the face with the help of a stereo setup, offering a higher level of security than traditional recognition programs. Analysis of the person's identity and facial depth map are processed through deep convolutional neural networks, providing a secure lo…
Estimating the confidence of disparity maps inferred by a stereo algorithm has become a very relevant task in the years, due to the increasing number of applications leveraging such cue. Although self-supervised learning has recently spread across many computer vision tasks, it has been barely considered in the field of confidence estimation. In this paper, we propose a flexible and lightweight solution enabling self-adapting confidence estimation agnostic to the stereo algorithm or network. Our approach relies on the minimum information available in any stereo setup (i.e., the input stereo pa…
DERD-Net: Learning Depth from Event-based Ray Densities
Technische Universität Berlin(柏林技术大学);Einstein Center Digital Future(爱因斯坦数字未来中心);Robotics Institute(机器人研究所);Science of Intelligence Excellence Cluster(智能科学卓越集群)
The Chinese University of Hong Kong(香港中文大学);SmartMore(思谋科技)
Camera-based 3D object detectors are welcome due to their wider deployment and lower price than LiDAR sensors. We first revisit the prior stereo detector DSGN for its stereo volume construction ways for representing both 3D geometry and semantics. We polish the stereo modeling and propose the advanced version, DSGN++, aiming to enhance effective information flow throughout the 2D-to-3D pipeline in three main aspects. First, to effectively lift the 2D information to stereo volume, we propose depth-wise plane sweeping (DPS) that allows denser connections and extracts depth-guided features. Secon…
Faculty of Electrical Engineering, University of Ljubljana(卢布尔雅那大学电气工程学院)
We address the problem of optical decalibration in mobile stereo camera setups, especially in context of autonomous vehicles. In real world conditions, an optical system is subject to various sources of anticipated and unanticipated mechanical stress (vibration, rough handling, collisions). Mechanical stress changes the geometry between the cameras that make up the stereo pair, and as a consequence, the pre-calculated epipolar geometry is no longer valid. Our method is based on optimization of camera geometry parameters and plugs directly into the output of the stereo matching algorithm. There…
Video streams are utilised to guide minimally-invasive surgery and diagnostic procedures in a wide range of procedures, and many computer assisted techniques have been developed to automatically analyse them. These approaches can provide additional information to the surgeon such as lesion detection, instrument navigation, or anatomy 3D shape modeling. However, the necessary image features to recognise these patterns are not always reliably detected due to the presence of irregular light patterns such as specular highlight reflections. In this paper, we aim at removing specular highlights from…
Event cameras are novel sensors that output brightness changes in the form of a stream of asynchronous events instead of intensity frames. Compared to conventional image sensors, they offer significant advantages: high temporal resolution, high dynamic range, no motion blur, and much lower bandwidth. Recently, learning-based approaches have been applied to event-based data, thus unlocking their potential and making significant progress in a variety of tasks, such as monocular depth prediction. Most existing approaches use standard feed-forward architectures to generate network predictions, whi…
We present a single-shot system to recover surface geometry of objects with spatially-varying albedos, from images captured under a calibrated RGB photometric stereo setup---with three light directions multiplexed across different color channels in the observed RGB image. Since the problem is ill-posed point-wise, we assume that the albedo map can be modeled as piece-wise constant with a restricted number of distinct albedo values. We show that under ideal conditions, the shape of a non-degenerate local constant albedo surface patch can theoretically be recovered exactly. Moreover, we present …
Univ Rennes(雷恩大学);Inserm(法国国家健康与医学研究院);Neotec Vision(Neotec视觉公司);ECAM Rennes - Louis de Broglie(雷恩ECAM-路易·德布罗意学院)
In the context of a localization and tracking application, we developed a stereo vision system based on cheap low-resolution 80x60 pixels thermal cameras. We proposed a threefold sub-pixel stereo matching framework (called ST for Subpixel Thermal): 1) robust features extraction method based on phase congruency, 2) rough matching of these features in pixel precision, and 3) refined matching in sub-pixel accuracy based on local phase coherence. We performed experiments on our very low-resolution thermal images (acquired using a stereo system we manufactured) as for high-resolution images from a …
Artisense;Technical University of Munich(慕尼黑工业大学);GREYC, UMR CNRS 6072(法国国家科学研究中心联合实验室GREYC)
Photometric stereo (PS) techniques nowadays remain constrained to an ideal laboratory setup where modeling and calibration of lighting is amenable. To eliminate such restrictions, we propose an efficient principled variational approach to uncalibrated PS under general illumination. To this end, the Lambertian reflectance model is approximated through a spherical harmonic expansion, which preserves the spatial invariance of the lighting. The joint recovery of shape, reflectance and illumination is then formulated as a single variational problem. There the shape estimation is carried out directl…
Toshiba Europe Ltd(东芝欧洲有限公司);University of Cambridge(剑桥大学)
Reconstructing the 3D shape of an object using several images under different light sources is a very challenging task, especially when realistic assumptions such as light propagation and attenuation, perspective viewing geometry and specular light reflection are considered. Many of works tackling Photometric Stereo (PS) problems often relax most of the aforementioned assumptions. Especially they ignore specular reflection and global illumination effects. In this work, we propose a CNN-based approach capable of handling these realistic assumptions by leveraging recent improvements of deep neur…
Tracking Any Point Methods for Markerless 3D Tissue Tracking in Endoscopic Stereo Images
Institute of Medical Technology and Intelligent Systems, Hamburg University of Technology(医学技术与智能系统研究所,汉堡技术大学);Department of Otorhinolaryngology, Head and Neck Surgery and Oncology, University Medical Center Hamburg-Eppendorf(耳鼻喉头颈外科与肿瘤学部,汉堡艾本多夫大学医学中心);Martini-Klinik Prostate Cancer Center, University Medical Center Hamburg-Eppendorf(马尔廷诊所前列腺癌中心,汉堡艾本多夫大学医学中心);Department of Urology, University Medical Center Hamburg-Eppendorf(泌尿外科,汉堡艾本多夫大学医学中心)
本文提出一种利用2D Tracking Any Point网络结合两个CoTracker模型实现内窥镜立体图像无标记3D组织追踪的新方法,实验验证了其在复杂手术场景中的准确性与潜力。