Phase diagram of the phenomenon of motility induced phase separation (MIPS) for a collection of self-propelled interacting disks is explored using Langevin dynamics simulation with particular emphasis on disk wall softness and the range of interaction amongst disks. We bring out important changes in the MIPS phase diagram both due to softness and inertia of the disks. Specifically, we show that overdamped softer disks phase separate while MIPS becomes possible only for harder disks in the inertial limit. Unlike most of the earlier studies on MIPS which consider hard-core disks, our findings may be directly applicable to soft active matter for a range of biological systems.
We study the behaviour of interacting self-propelled particles, whose self-propulsion speed decreases with their local density. By combining direct simulations of the microscopic model with an analysis of the hydrodynamic equations obtained by explicitly coarse graining the model, we show that interactions lead generically to the formation of a host of patterns, including moving clumps, active lanes and asters. This general mechanism could explain many of the patterns seen in recent experiments and simulations.
Spontaneous segregation of run-and-tumble particles with different velocities in microchannels is investigated by numerical simulations. Self-propelled particles are known to accumulate in the proximity of walls. Here we show how fast particles expel slower ones from the wall leading to a segregated state. The mechanism is understood as a function of particle velocities, particle density, or channel width. In the presence of an external fluid flow, particles with two different velocities segregate due to their different particle fluxes. Promising applications can be found in the development of…
We study the collective dynamics of self-propelled rods in an inhomogeneous motility field. At the interface between two regions of constant but different motility, a smectic rod layer is spontaneously created through aligning interactions between the active rods, reminiscent of an artificial, semi-permeable membrane. This "active membrane" engulfes rods which are locally trapped in low-motility regions and thereby further enhances the trapping efficiency by self-organization, an effect which we call "self-encapsulation". Our results are gained by computer simulations of self-propelled rod mod…
Self-propelled particles include both self-phoretic synthetic colloids and various micro-organisms. By continually consuming energy, they bypass the laws of equilibrium thermodynamics. These laws enforce the Boltzmann distribution in thermal equilibrium: the steady state is then independent of kinetic parameters. In contrast, self-propelled particles tend to accumulate where they move more slowly. They may also slow down at high density, for either biochemical or steric reasons. This creates positive feedback which can lead to motility-induced phase separation (MIPS) between dense and dilute f…
Many biological systems consist of self-motile and passive agents both of which contribute to overall functionality. However, there are very few studies of the properties of such mixtures. Here we formulate a model for mixtures of self-motile and passive agents and show that the model gives rise to three different dynamical phases: a disordered mesoturbulent phase, a polar flocking phase, and a vortical phase characterized by large-scale counterrotating vortices. We use numerical simulations to construct a phase diagram and compare the statistical properties of the different phases of the mode…
We study the phase behavior of polar Active Brownian Particles moving in two-spatial dimensions and interacting through volume exclusion and velocity alignment. We combine particle-based simulations of the microscopic model with a simple mean-field kinetic model to understand the impact of velocity alignment on the motility-induced phase separation of self-propelled disks. We show that, as the alignment strength is increased, approaching the onset of collective motion from below, orientational correlations grow, rendering the diffusive reorientation dynamics slower. As a consequence, the tende…
We investigate the dynamical coupling between the motion and the deformation of a single self-propelled domain based on two different model systems in two dimensions. One is represented by the set of ordinary differential equations for the center of gravity and two tensor variables characterizing deformations. The other is an active cell model which has an internal mechanism of motility and is represented by the partial differential equation for deformations. Numerical simulations show a rich variety of dynamics, some of which are common to the two model systems. The origin of the similarity a…
A collection of self-propelled particles with volume exclusion interactions can exhibit the phenomenology of gas-liquid phase separation, known as motility-induced phase separation (MIPS). The non-equilibrium nature of the system is fundamental to the phase transition, however, it is unclear whether MIPS at criticality contributes a novel universality class to non-equilibrium physics. We demonstrate here that this is not the case by showing that a generic critical MIPS belongs to the Ising universality class with conservative dynamics.
We derive a dynamical field theory for self-propelled particles subjected to generic torques and forces by explicitly coarse-graining their microscopic dynamics, described by a many-body Fokker-Planck equation. The model includes both intrinsic torques inducing self-rotation, as well as interparticle torques leading to, for instance, the local alignment of particles' orientations. Within this approach, although the functional form of the pairwise interactions does not need to be specified, one can directly map the parameters of the field theory onto the parameters of particle-based models. We …
Starting from a microscopic model of self-propelled hard spheres we use tools of non-equilibrium statistical mechanics and the kinetic theory of hard spheres to derive a Smoluchowski equation for interacting Active Brownian particles. We illustrate the utility of the statistical mechanics framework developed with two applications. First, we derive the steady state pressure of the hard sphere active fluid in terms of the microscopic parameters and second, we identify the critical density for the onset of motility-induced phase separation in this system. We show that both these quantities agree …
Microorganisms are able to overcome the thermal randomness of their surroundings by harvesting energy to navigate in viscous fluid environments. In a similar manner, synthetic colloidal microswimmers are capable of mimicking complex biolocomotion by means of simple self-propulsion mechanisms. Although experimentally the speed of active particles can be controlled by e.g. self-generated chemical and thermal gradients, an in-situ change of swimming direction remains a challenge. In this work, we study self-propulsion of half-coated spherical colloids in critical binary mixtures and show that the…
We present a comprehensive study of a model system of repulsive self-propelled disks in two dimensions with ferromagnetic and nematic velocity alignment interactions. We characterize the phase behavior of the system as a function of the alignment and self-propulsion strength, featuring orientational order for strong alignment and Motility-Induced Phase Separation (MIPS) at moderate alignment but high enough self-propulsion. We derive a microscopic theory for these systems yielding a close set of hydrodynamic equations from which we perform a linear stability analysis of the homogenous disorder…
We show that memory, in the form of underdamped angular dynamics, is a crucial ingredient for the collective properties of self-propelled particles. Using Vicsek-style models with an Ornstein-Uhlenbeck process acting on angular velocity, we uncover a rich variety of collective phases not observed in usual overdamped systems, including vortex lattices and active foams. In a model with strictly nematic interactions the smectic arrangement of Vicsek waves giving rise to global polar order is observed. We also provide a calculation of the effective interaction between vortices in the case where a …
As a result of nonequilibrium forces, purely repulsive self-propelled particles undergo macrophase separation between a dense and a dilute phase. We present a thorough study of the ordering kinetics of such motility-induced phase separation (MIPS) in active Brownian particles in two dimensions, and we show that it is generically accompanied by microphase separation. The growth of the dense phase follows a law akin to the one of liquid-gas phase separation. However, it is made of a mosaic of hexatic microdomains whose size does not coarsen indefinitely, leaving behind a network of extended topo…
We study a robust model of self-propelled rods interacting via volume exclusion and show that its collective dynamics encompasses both that of the corresponding Vicsek-style model (where local alignment is the sole interaction), and motility-induced phase separation (which occurs when repulsion is dominant). These results unify these heretofore largely disconnected bodies of knowledge on dry active matter and clarify the nature of the various phases involved.
We use coarse-grained molecular dynamics simulations to study the motility of a 2D vesicle containing self-propelled rods, as a function of the vesicle bending rigidity and the number density, length, and activity of the enclosed rods. Above a threshold value of the rod length, distinct dynamical regimes emerge, including a dramatic enhancement of vesicle motility characterized by a highly persistent random walk. These regimes are determined by clustering of the rods within the vesicle; the maximum motility state arises when there is one long-lived polar cluster. We develop a scaling theory th…
Motility-induced phase separation, MIPS, is arguably the most well-studied collective phenomenon occurring in active matter without alignment interactions (scalar active matter). Its basic origin is simple: since self-propelled particles accumulate where they move slowly, having a propulsion speed that decreases steeply enough with density, due to collisions or chemical interactions, leads to a feedback loop that induces the formation of a dense phase. In these notes, I will discuss some of the main theoretical and computational efforts that have been made over the last decade in understanding…
Active systems, or active matter, are self-driven systems which live, or function, far from equilibrium - a paradigmatic example which we focus on here is provided by a suspension of self-motile particles. Active systems are far from equilibrium because their microscopic constituents constantly consume energy from the environment in order to do work, for instance to propel themselves. The nonequilibrium nature of active matter leads to a variety of non-trivial intriguing phenomena. An important one which has recently been the subject of intense interest among biological and soft matter physici…
We study active surface wetting using a minimal model of bacteria that takes into account the intrinsic motility diversity of living matter. A mixture of "fast" and "slow" self-propelled Brownian particles is considered in the presence of a wall. The evolution of the wetting layer thickness shows an overshoot before stationarity and its composition evolves in two stages, equilibrating after a slow elimination of excess particles. Non-monotonic evolutions are shown to arise from delayed avalanches towards the dilute phase combined with the emergence of a transient particle front.
A wide range of experimental systems including gliding, swarming and swimming bacteria, in-vitro motility assays as well as shaken granular media are commonly described as self-propelled rods. Large ensembles of those entities display a large variety of self-organized, collective phenomena, including formation of moving polar clusters, polar and nematic dynamic bands, mobility-induced phase separation, topological defects and mesoscale turbulence, among others. Here, we give a brief survey of experimental observations and review the theoretical description of self-propelled rods. Our focus is …
Designing microscopic and nanoscopic self-propelled particles and characterising their motion has become a major scientific challenge over the past decades. To this purpose, phoretic effects, namely propulsion mechanisms relying on local field gradients, have been the focus of many theoretical and experimental studies. In this review, we adopt a tutorial approach to present the basic physical mechanisms at stake in phoretic motion, and describe the different experimental works that lead to the fabrication of active particles based on this principle. We also present the collective effects obser…
Model systems of self-propelled particles reproduce many phenomena observed in laboratory active matter systems that defy our thermal equilibrium-based intuition. In particular, in stationary states of self-propelled systems, it is recognized that velocities of different particles exhibit non-trivial equal-time correlations. Such correlations are absent in equivalent equilibrium systems. Recently, researchers found that the range of the velocity correlations increases with increasing persistence time of the self-propulsion and can extend over many particle diameters. Here we review the initial…
We numerically and experimentally study the segregation dynamics in a binary mixture of microswimmers which move on a two-dimensional substrate in a static periodic triangular-like light intensity field. The motility of the active particles is proportional to the imposed light intensity and they possess a motility contrast, i.e., the prefactor depends on the species. In addition, the active particles also experience a torque aligning their motion towards the direction of the negative intensity gradient. We find a segregation of active particles near the intensity minima where typically one spe…
Minimal models of self-propelled particles with short-range volume exclusion interactions have been shown to exhibit signatures of phase separation. Here I show that the observed interfacial stability and fluctuations in motility-induced phase separations (MIPS) can be explained by modeling the microscopic dynamics of the active particles in the interfacial region. In addition, I demonstrate the validity of the Gibbs-Thomson relation in MIPS, which provides a functional relationship between the size of a condensed drop and its surrounding vapor concentration. As a result, the coarsening dynami…
Suspensions of motile cells are model systems for understanding the unique mechanical properties of living materials which often consist of ensembles of self-propelled particles. We present here a quantitative comparison of theory against experiment for the rheology of such suspensions. The influence of motility on viscosities of cell suspensions is studied using a novel acoustically-driven microfluidic capillary-breakup extensional rheometer. Motility increases the extensional viscosity of suspensions of algal pullers, but decreases it in the case of bacterial or sperm pushers. A recent model…
Motility-induced phase separation (MIPS) arises generically in fluids of self-propelled particles when interactions lead to a kinetic slowdown at high densities. Starting from a continuum description of scalar active matter, akin to a generalized Cahn-Hilliard equation, we give a general prescription for the mean densities of coexisting phases in flux-free steady states that amounts, at a hydrodynamics scale, to extremizing an effective free energy. We illustrate our approach on two well-known models: self-propelled particles interacting either through a density-dependent propulsion speed or v…
In many biological systems, the curvature of the surfaces cells live on influence their collective properties. Curvature should likewise influence the behavior of active colloidal particles. We show using molecular simulation of self-propelled active particles on surfaces of Gaussian curvature (both positive and negative) that curvature sign and magnitude can alter the system's collective behavior. Curvature acts as a geometrical lens and shifts the critical density of motility-induced phase separation (MIPS) to lower values for positive curvature and higher values for negative curvature, whic…
Active Brownian particles (ABPs) represent a minimal model of active matter consisting of self-propelled spheres with purely repulsive interactions and rotational noise. Here, we examine the pressure of ABPs in two dimensions in both closed boxes and systems with periodic boundary conditions and show that its nonmonotonic behavior with density is a robust feature, independent of system size. We correlate the time evolution of the mean pressure towards its steady state value with the kinetics of motility-induced phase separation. For parameter values corresponding to phase separated steady stat…
We introduce a kinetic Monte-Carlo model for self-propelled hard disks to capture with minimal ingredients the interplay between thermal fluctuations, excluded volume and self-propulsion in large assemblies of active particles. We analyze in detail the resulting (density, self-propulsion) nonequilibrium phase diagram over a broad range of parameters. We find that purely repulsive hard disks spontaneously aggregate into fractal clusters as self-propulsion is increased, and rationalize the evolution of the average cluster size by developing a kinetic model of reversible aggregation. As density i…
Motility-dependent selective transport of active matter in trap arrays: Separation methods based on trapping-detrapping and deterministic lateral displacement
We propose a reciprocal, self-propelled model swimmer at intermediate Reynolds numbers ($Re$). Our swimmer consists of two unequal spheres that oscillate in antiphase generating nonlinear steady streaming (SS) flows. We show computationally that the SS flows enable the swimmer to propel itself, and also switch direction as $Re$ increases. We quantify the transition in the swimming direction by collapsing our data on a critical $Re$ and show that the transition in swimming directions corresponds to the reversal of the SS flows. Based on our findings, we propose that SS can be an important physi…
Combining model experiments and theory, we investigate the dense phases of polar active matter beyond the conventional flocking picture. We show that above a critical density flocks assembled from self-propelled colloids arrest their collective motion, lose their orientational order and form solids that actively rearrange their local structure while continuously melting and freezing at their boundaries. We establish that active solidification is a first-order dynamical transition: active solids nucleate, grow, and slowly coarsen until complete phase separation with the polar liquids they coexi…
Motility-induced phase separation (MIPS) is a purely non-equilibrium phenomenon in which self-propelled particles phase separate without any attractive interactions. One surprising feature of MIPS is the emergence of polar, nematic, and higher order structures at the interfacial region, whose underlying physics remains poorly understood. Starting with a model of MIPS in which all many-body interactions are captured by an effective speed function and an effective pressure function that depend solely on the local particle density, I derive analytically an infinite set of integral formulae (IF) f…
We study a strongly interacting crowded system of self-propelled stiff filaments by event-driven Brownian dynamics simulations and an analytical theory to elucidate the intricate interplay of crowding and self-propulsion. We find a remarkable increase of the effective diffusivity upon increasing the filament number density by more than one order of magnitude. This counter-intuitive 'crowded is faster' behavior can be rationalized by extending the concept of a confining tube pioneered by Doi and Edwards for highly entangled crowded, passive to active systems. We predict a scaling theory for the…
On the basis of a model we capture the role of strong attractive interaction in suppressing the rotational degrees of freedom of the system and volume exclusion in keeping microscopic symmetry-breaking intact to result in super-diffusive transport of small systems in a thermal atmosphere over a large time scale. Our results, characterize such systems on the basis of having a super-diffusive intermediate regime in between a very small and large time scales of diffusive regimes. Although, the Brownian ratchet model fails to account for the origin of motility in actin polymerization propelled dir…
Worm-like filaments that are propelled homogeneously along their tangent vector are studied by Brownian dynamics simulations. Systems in two dimensions are investigated, corresponding to filaments adsorbed to interfaces or surfaces. A large parameter space covering weak and strong propulsion, as well as flexible and stiff filaments is explored. For strongly propelled and flexible filaments, the free-swimming filaments spontaneously form stable spirals. The propulsion force has a strong impact on dynamic properties, such as the rotational and translational mean square displacement and the rate …
Active agents - like phoretic particles, bacteria, sperm, and cytoskeletal filaments in motility assays - show a large variety of motility-induced collective behaviors, such as aggregation, clustering and phase separation. The behavior of dense suspensions of phoretic particles and of bacteria during biofilm formation is determined by two principle physical mechanisms: (i) volume exclusion (short-range steric repulsion) and (ii) quorum sensing (longer-range reduced propulsion due to alteration of the local chemical environment). To systematically characterize such systems, we study semi-penetr…
Active particles which are self-propelled by converting energy into mechanical motion represent an expanding research realm in physics and chemistry. For micron-sized particles moving in a liquid ("microswimmers"), most of the basic features have been described by using the model of overdamped active Brownian motion. However, for macroscopic particles or microparticles moving in a gas, inertial effects become relevant such that the dynamics is underdamped. Therefore, recently, active particles with inertia have been described by extending the active Brownian motion model to active Langevin dyn…
Collective behavior of self-propelled particles is observed on a microscale for swimmers such as sperm and bacteria as well as for protein filaments in motility assays. The properties of such systems depend both on their dimensionality and the interactions between their particles. We introduce a model for self-propelled rods in two dimensions that interact via a separation-shifted Lennard-Jones potential. Due to the finite potential barrier, the rods are able to cross. This model allows us to efficiently simulate systems of self-propelled rods that effectively move in two dimensions but can oc…
Active matter consists of self-propelled elements exhibits fascinating collective motions ranging from biological to artificial systems. Among wide varieties of active matter systems, reconstituted bio-filaments moving on molecular motor turf interacting purely by physical interactions provides the fundamental test ground for understanding biological motility. However, until now, multi-filament collisions,depletion agents or binding molecules has been required for the emergence of ordered patterns in motility assay. Thus, whether simple physical interactions during collisions such as steric ef…
As the constituent particles of a flock are polar and in a driven state, their interactions must, in general, be fore-aft asymmetric and non-reciprocal. Within a model that explicitly retains the classical spin angular momentum field of the particles we show that the resulting asymmetric contribution to interparticle torques, if large enough, leads to a buckling instability of the flock. Precisely this asymmetry also yields a natural mechanism for a difference between the speed of advection of information along the flock and the speed of the flock itself, concretely establishing that the absen…
