Functional variables are often used as predictors in regression problems. A commonly-used parametric approach, called {\it scalar-on-function regression}, uses the $\ltwo$ inner product to map functional predictors into scalar responses. This method can perform poorly when predictor functions contain undesired phase variability, causing phases to have disproportionately large influence on the response variable. One past solution has been to perform phase-amplitude separation (as a pre-processing step) and then use only the amplitudes in the regression model. Here we propose a more integrated approach, termed elastic functional regression model (EFRM), where phase-separation is performed inside the regression model, rather than as a pre-processing step. This approach generalizes the notion of phase in functional data, and is based on the norm-preserving time warping of predictors. Due to its invariance properties, this representation provides robustness to predictor phase variability and results in improved predictions of the response variable over traditional models. We demonstrate this framework using a number of datasets involving gait signals, NMR data, and stock market prices.
This paper presents a fast methodology, called ROBOUT, to identify outliers in a response variable conditional on a set of linearly related predictors, retrieved from a large granular dataset. ROBOUT is shown to be effective and particularly versatile compared to existing methods in the presence of a number of data idiosyncratic features. ROBOUT is able to identify observations with outlying conditional variance when the dataset contains element-wise sparse variables, and the set of predictors contains multivariate outliers. Existing integrated methodologies like SPARSE-LTS and RLARS are syste…
Whereas translating the coding of predictor variables does not change the fit of a polynomial least squares regression, penalized polynomial regressions are potentially affected. A result on which terms can be penalized to maintain the invariance to translations of the coding has earlier been published. A generalization of a corresponding proposition, which requires a more precise mathematical framework, is presented in this short note.
Groupwise Predictor Envelope Models for Multivariate Linear Regression
The Institute of Statistical Mathematics（统计数学研究所）；Graduate School of Mathematics, Kyushu University（九州大学大学院数理学府）；Faculty of Mathematics, Kyushu University（九州大学数学部）
Within the statistical and machine learning literature, regularization techniques are often used to construct sparse (predictive) models. Most regularization strategies only work for data where all predictors are treated identically, such as Lasso regression for (continuous) predictors treated as linear effects. However, many predictive problems involve different types of predictors and require a tailored regularization term. We propose a multi-type Lasso penalty that acts on the objective function as a sum of subpenalties, one for each type of predictor. As such, we allow for predictor select…
This paper considers linear model selection when the response is vector-valued and the predictors are randomly observed. We propose a new approach that decouples statistical inference from the selection step in a "post-inference model summarization" strategy. We study the impact of predictor uncertainty on the model selection procedure. The method is demonstrated through an application to asset pricing.
The paper proposes to analyze epidemiological data using regression models which enable subject-matter (epidemiological) interpretation of such data whether with uncorrelated or correlated predictors. To this end, response functions should include not only terms linear in predictors but also higher order ones (e.g. quadratic and cross terms). For epidemiological interpretation of a regression model, the suggestion is to construct conditional functions derived from the general regression function with the values of all predictor variables held fixed excepting one predictor. Unlike the conventio…
Deciding which predictors to use plays an integral role in deriving statistical models in a wide range of applications. Motivated by the challenges of predicting events across a telecommunications network, we propose a semi-automated, joint model-fitting and predictor selection procedure for linear regression models. Our approach can model and account for serial correlation in the regression residuals, produces sparse and interpretable models and can be used to jointly select models for a group of related responses. This is achieved through fitting linear models under constraints on the number…
In prediction problems with more predictors than observations, it can sometimes be helpful to use a joint probability model, $π(Y,X)$, rather than a purely conditional model, $π(Y \mid X)$, where $Y$ is a scalar response variable and $X$ is a vector of predictors. This approach is motivated by the fact that in many situations the marginal predictor distribution $π(X)$ can provide useful information about the parameter values governing the conditional regression. However, under very mild misspecification, this marginal distribution can also lead conditional inferences astray. Here, we explore t…
A regression model is proposed for the analysis of an ordinal response variable depending on a set of multiple covariates containing ordinal and potentially other variables. The proportional odds model (McCullagh (1980)) is used for the ordinal response, and constrained maximum likelihood estimation is used to account for the ordinality of covariates. Ordinal predictors are coded by dummy variables. The parameters associated to the categories of the ordinal predictor(s) are constrained, enforcing them to be monotonic (isotonic or antitonic). A decision rule is introduced for classifying the or…
Traditionally, the least squares regression is mainly concerned with studying the effects of individual predictor variables, but strongly correlated variables generate multicollinearity which makes it difficult to study their effects. Existing methods for handling multicollinearity such as ridge regression are complicated. To resolve the multicollinearity issue without abandoning the simple least squares regression, for situations where predictor variables are in groups with strong within-group correlations but weak between-group correlations, we propose to study the effects of the groups with…
Additive-interactive regression has recently been shown to offer attractive minimax error rates over traditional nonparametric multivariate regression in a wide variety of settings, including cases where the predictor count is much larger than the sample size and many of the predictors have important effects on the response, potentially through complex interactions. We present a Bayesian implementation of additive-interactive regression using an additive Gaussian process (AGP) prior and develop an efficient Markov chain sampler that extends stochastic search variable selection in this setting.…
A variable group Y is assumed to depend upon R thematic variable groups X 1, >..., X R . We assume that components in Y depend linearly upon components in the Xr's. In this work, we propose a multiple covariance criterion which extends that of PLS regression to this multiple predictor groups situation. On this criterion, we build a PLS-type exploratory method - Structural Equation Exploratory Regression (SEER) - that allows to simultaneously perform dimension reduction in groups and investigate the linear model of the components. SEER uses the multidimensional structure of each group. An appli…
Scalar-on-function logistic regression, where the response is a binary outcome and the predictor consists of random curves, has become a general framework to explore a linear relationship between the binary outcome and functional predictor. Most of the methods used to estimate this model are based on the least-squares type estimators. However, the least-squares estimator is seriously hindered by outliers, leading to biased parameter estimates and an increased probability of misclassification. This paper proposes a robust partial least squares method to estimate the regression coefficient funct…
We propose a penalized likelihood method to fit the bivariate categorical response regression model. Our method allows practitioners to estimate which predictors are irrelevant, which predictors only affect the marginal distributions of the bivariate response, and which predictors affect both the marginal distributions and log odds ratios. To compute our estimator, we propose an efficient first order algorithm which we extend to settings where some subjects have only one response variable measured, i.e., the semi-supervised setting. We derive an asymptotic error bound which illustrates the per…
We propose a ranking and selection procedure to prioritize relevant predictors and control false discovery proportion (FDP) of variable selection. Our procedure utilizes a new ranking method built upon the de-sparsified Lasso estimator. We show that the new ranking method achieves the optimal order of minimum non-zero effects in ranking relevant predictors ahead of irrelevant ones. Adopting the new ranking method, we develop a variable selection procedure to asymptotically control FDP at a user-specified level. We show that our procedure can consistently estimate the FDP of variable selection …
Compositional data are common in many fields, both as outcomes and predictor variables. The inventory of models for the case when both the outcome and predictor variables are compositional is limited and the existing models are difficult to interpret, due to their use of complex log-ratio transformations. We develop a transformation-free linear regression model where the expected value of the compositional outcome is expressed as a single Markov transition from the compositional predictor. Our approach is based on generalized method of moments thereby not requiring complete specification of da…
Classical finite mixture regression is useful for modeling the relationship between scalar predictors and scalar responses arising from subpopulations defined by the differing associations between those predictors and responses. Here we extend the classical finite mixture regression model to incorporate functional predictors by taking a wavelet-based approach in which we represent both the functional predictors and the component-specific coefficient functions in terms of an appropriate wavelet basis. In the wavelet representation of the model, the coefficients corresponding to the functional c…
In this manuscript, we study quantile regression in partial functional linear model where response is scalar and predictors include both scalars and multiple functions. Wavelet basis are adopted to better approximate functional slopes while effectively detect local features. The sparse group lasso penalty is imposed to select important functional predictors while capture shared information among them. The estimation problem can be reformulated into a standard second-order cone program and then solved by an interior point method. We also give a novel algorithm by using alternating direction met…
We propose a principal components regression method based on maximizing a joint pseudo-likelihood for responses and predictors. Our method uses both responses and predictors to select linear combinations of the predictors relevant for the regression, thereby addressing an oft-cited deficiency of conventional principal components regression. The proposed estimator is shown to be consistent in a wide range of settings, including ones with non-normal and dependent observations; conditions on the first and second moments suffice if the number of predictors ($p$) is fixed and the number of observat…
Local Fréchet Regression with Riemannian Predictors
The Institute for Data Innovation in Science, Seoul National University（首尔大学数据创新科学研究所）；Department of Statistics and School of Transdisciplinary Innovations, Seoul National University（首尔大学统计系与跨学科创新学院）
Heavy-tailed continuous shrinkage priors, such as the horseshoe prior, are widely used for sparse estimation problems. However, there is limited work extending these priors to predictors with grouping structures. Of particular interest in this article, is regression coefficient estimation where pockets of high collinearity in the covariate space are contained within known covariate groupings. To assuage variance inflation due to multicollinearity we propose the group inverse-gamma gamma (GIGG) prior, a heavy-tailed prior that can trade-off between local and group shrinkage in a data adaptive f…
In this work, we introduce a modified (rescaled) likelihood for imbalanced logistic regression. This new approach makes easier the use of exponential priors and the computation of lasso regularization path. Precisely, we study a limiting behavior for which class imbalance is artificially increased by replication of the majority class observations. If some strong overlap conditions are satisfied, the maximum likelihood estimate converges towards a finite value close to the initial one (intercept excluded) as shown by simulations with binary predictors. This solution corresponds to the extremum …
We provide a remedy for two concerns that have dogged the use of principal components in regression: (i) principal components are computed from the predictors alone and do not make apparent use of the response, and (ii) principal components are not invariant or equivariant under full rank linear transformation of the predictors. The development begins with principal fitted components [Cook, R. D. (2007). Fisher lecture: Dimension reduction in regression (with discussion). Statist. Sci. 22 1--26] and uses normal models for the inverse regression of the predictors on the response to gain reducti…
This article proposes a Bayesian approach to regression with a continuous scalar response and an undirected network predictor. Undirected network predictors are often expressed in terms of symmetric adjacency matrices, with rows and columns of the matrix representing the nodes, and zero entries signifying no association between two corresponding nodes. Network predictor matrices are typically vectorized prior to any analysis, thus failing to account for the important structural information in the network. This results in poor inferential and predictive performance in presence of small sample s…
In a longitudinal study, measures of key variables might be incomplete or partially recorded due to drop-out, loss to follow-up, or early termination of the study occurring before the advent of the event of interest. In this paper, we focus primarily on the implementation of a regression model with a randomly censored predictor. We examine, particularly, the use of inverse probability weighting methods in a generalized linear model (GLM), when the predictor of interest is right-censored, to adjust for censoring. To improve the performance of the complete-case analysis and prevent selection bia…
We develop a novel Bayesian method to select important predictors in regression models with multiple responses of diverse types. A sparse Gaussian copula regression model is used to account for the multivariate dependencies between any combination of discrete and/or continuous responses and their association with a set of predictors. We utilize the parameter expansion for data augmentation strategy to construct a Markov chain Monte Carlo algorithm for the estimation of the parameters and the latent variables of the model. Based on a centered parametrization of the Gaussian latent variables, we…
We develop a modeling framework for dynamic function-on-scalars regression, in which a time series of functional data is regressed on a time series of scalar predictors. The regression coefficient function for each predictor is allowed to be dynamic, which is essential for applications where the association between predictors and a (functional) response is time-varying. For greater modeling flexibility, we design a nonparametric reduced-rank functional data model with an unknown functional basis expansion, which is data-adaptive and, unlike most existing methods, modeled as unknown for appropr…
In a recent paper Noh et al. (2013) proposed a new semiparametric estimate of a regression function with a multivariate predictor, which is based on a specification of the dependence structure between the predictor and the response by means of a parametric copula. This paper investigates the effect which occurs under misspecification of the parametric model. We demonstrate that even for a one or two dimensional predictor the error caused by a \wrong" specification of the parametric family is rather severe, if the regression is not monotone in one of the components of the predictor. Moreover, w…
This paper presents Sparse Partitioning, a Bayesian method for identifying predictors that either individually or in combination with others affect a response variable. The method is designed for regression problems involving binary or tertiary predictors and allows the number of predictors to exceed the size of the sample, two properties which make it well suited for association studies. Sparse Partitioning differs from other regression methods by placing no restrictions on how the predictors may influence the response. To compensate for this generality, Sparse Partitioning implements a novel…
The $α$--regression for compositional data: a unified framework for standard, temporal and spatial regression models including compositional predictors
University of Crete（克里特大学）；King Saud bin Abdulaziz University for Health Sciences（国王萨勒曼·本·阿卜杜勒阿齐兹健康科学大学）；King Abdullah International Medical Research Center（阿卜杜拉国王国际医学研究中心）；Northern Border University（北部边境大学）
The research described in this paper is motivated by model checking for parametric single-index models with diverging number of predictors. To construct a test statistic, we first study the asymptotic property of the estimators of involved parameters of interest under the null and alternative hypothesis when the dimension is divergent to infinity as the sample size goes to infinity. For the testing problem, we study an adaptive-to-model residual-marked empirical process as the basis for constructing a test statistic. By modifying the approach in the literature to suit the diverging dimension s…
Generalized linear and additive models are very efficient regression tools but the selection of relevant terms becomes difficult if higher order interactions are needed. In contrast, tree-based methods also known as recursive partitioning are explicitly designed to model a specific form of interaction but with their focus on interaction tend to neglect the main effects. The method proposed here focusses on the main effects of categorical predictors by using tree type methods to obtain clusters. In particular when the predictor has many categories one wants to know which of the categories have …
This paper studies macroeconomic forecasting and variable selection using a folded-concave penalized regression with a very large number of predictors. The penalized regression approach leads to sparse estimates of the regression coefficients, and is applicable even if the dimensionality of the model is much larger than the sample size. The first half of the paper discusses the theoretical aspects of a folded-concave penalized regression when the model exhibits time series dependence. Specifically, we show the oracle inequality and the oracle property for ultrahigh-dimensional time-dependent r…
Functional linear regression is an important topic in functional data analysis. It is commonly assumed that samples of the functional predictor are independent realizations of an underlying stochastic process, and are observed over a grid of points contaminated by i.i.d. measurement errors. In practice, however, the dynamical dependence across different curves may exist and the parametric assumption on the error covariance structure could be unrealistic. In this paper, we consider functional linear regression with serially dependent observations of the functional predictor, when the contaminat…
Although there is a rich literature on methods for allowing the variance in a univariate regression model to vary with predictors, time and other factors, relatively little has been done in the multivariate case. Our focus is on developing a class of nonparametric covariance regression models, which allow an unknown p x p covariance matrix to change flexibly with predictors. The proposed modeling framework induces a prior on a collection of covariance matrices indexed by predictors through priors for predictor-dependent loadings matrices in a factor model. In particular, the predictor-dependen…
In this paper, we propose methods for functional predictor selection and the estimation of smooth functional coefficients simultaneously in a scalar-on-function regression problem under high-dimensional multivariate functional data setting. In particular, we develop two methods for functional group-sparse regression under a generic Hilbert space of infinite dimension. We show the convergence of algorithms and the consistency of the estimation and the selection (oracle property) under infinite-dimensional Hilbert spaces. Simulation studies show the effectiveness of the methods in both the selec…
Scientific theories can often be formulated using equality and order constraints on the relative effects in a linear regression model. For example, it may be expected that the effect of the first predictor is larger than the effect of the second predictor, and the second predictor is expected to be larger than the third predictor. The goal is then to test such expectations against competing scientific expectations or theories. In this paper a simple default Bayes factor test is proposed for testing multiple hypotheses with equality and order constraints on the effects of interest. The proposed…
Many important modeling tasks in linear regression, including variable selection (in which slopes of some predictors are set equal to zero) and simplified models based on sums or differences of predictors (in which slopes of those predictors are set equal to each other, or the negative of each other, respectively), can be viewed as being based on imposing linear restrictions on regression parameters. In this paper, we discuss how such models can be compared using information criteria designed to estimate predictive measures like squared error and Kullback-Leibler (KL) discrepancy, in the prese…
This paper concerns the robust regression model when the number of predictors and the number of observations grow in a similar rate. Theory for M-estimators in this regime has been recently developed by several authors [El Karoui et al., 2013, Bean et al., 2013, Donoho and Montanari, 2013]. Motivated by the inability of M-estimators to successfully estimate the Euclidean norm of the coefficient vector, we consider a Bayesian framework for this model. We suggest a two-component mixture of normals prior for the coefficients and develop a Gibbs sampler procedure for sampling from relevant posteri…
In regression models, predictor variables with inherent ordering, such as tumor staging ranging and ECOG performance status, are commonly seen in medical settings. Statistically, it may be difficult to determine the functional form of an ordinal predictor variable. Often, such a variable is dichotomized based on whether it is above or below a certain cutoff. Other methods conveniently treat the ordinal predictor as a continuous variable and assume a linear relationship with the outcome. However, arbitrarily choosing a method may lead to inaccurate inference and treatment. In this paper, we pro…
