Automatic Liver Segmentation with Adversarial Loss and Convolutional Neural Network

Automatic segmentation of kidney and liver tumors in CT images

Automatic segmentation of hepatic lesions in computed tomography (CT) images is a challenging task to perform due to heterogeneous, diffusive shape of tumors and complex background. To address the problem more and more researchers rely on assistance of deep convolutional neural networks (CNN) with 2D or 3D type architecture that have proven to be effective in a wide range of computer vision tasks, including medical image processing. In this technical report, we carry out research focused on more careful approach to the process of learning rather than on complex architecture of the CNN. We have…

Comparing Deep Learning strategies for paired but unregistered multimodal segmentation of the liver in T1 and T2-weighted MRI

We address the problem of multimodal liver segmentation in paired but unregistered T1 and T2-weighted MR images. We compare several strategies described in the literature, with or without multi-task training, with or without pre-registration. We also compare different loss functions (cross-entropy, Dice loss, and three adversarial losses). All methods achieved comparable performances with the exception of a multi-task setting that performs both segmentations at once, which performed poorly.

增强3D肝脏血管模型的自动分割与分析

Enhancing the automatic segmentation and analysis of 3D liver vasculature models

本研究针对肝癌手术评估中肝脏血管树分割分析需求，构建深度学习与图像处理结合的自动化流水线，改进骨架提取与多类别静脉树分离方法，构建77例公开数据集并实现解剖学标注与形态计量分析。

Detection-aided liver lesion segmentation using deep learning

A fully automatic technique for segmenting the liver and localizing its unhealthy tissues is a convenient tool in order to diagnose hepatic diseases and assess the response to the according treatments. In this work we propose a method to segment the liver and its lesions from Computed Tomography (CT) scans using Convolutional Neural Networks (CNNs), that have proven good results in a variety of computer vision tasks, including medical imaging. The network that segments the lesions consists of a cascaded architecture, which first focuses on the region of the liver in order to segment the lesion…

RA-UNet: A hybrid deep attention-aware network to extract liver and tumor in CT scans

Automatic extraction of liver and tumor from CT volumes is a challenging task due to their heterogeneous and diffusive shapes. Recently, 2D and 3D deep convolutional neural networks have become popular in medical image segmentation tasks because of the utilization of large labeled datasets to learn hierarchical features. However, 3D networks have some drawbacks due to their high cost on computational resources. In this paper, we propose a 3D hybrid residual attention-aware segmentation method, named RA-UNet, to precisely extract the liver volume of interests (VOI) and segment tumors from the l…

A deep learning pipeline for localization, differentiation, and uncertainty estimation of liver lesions using multi-phasic and multi-sequence MRI

Objectives: to propose a fully-automatic computer-aided diagnosis (CAD) solution for liver lesion characterization, with uncertainty estimation. Methods: we enrolled 400 patients who had either liver resection or a biopsy and was diagnosed with either hepatocellular carcinoma (HCC), intrahepatic cholangiocarcinoma, or secondary metastasis, from 2006 to 2019. Each patient was scanned with T1WI, T2WI, T1WI venous phase (T2WI-V), T1WI arterial phase (T1WI-A), and DWI MRI sequences. We propose a fully-automatic deep CAD pipeline that localizes lesions from 3D MRI studies using key-slice parsing an…

SAR-U-Net: squeeze-and-excitation block and atrous spatial pyramid pooling based residual U-Net for automatic liver segmentation in Computed Tomography

Background and objective: In this paper, a modified U-Net based framework is presented, which leverages techniques from Squeeze-and-Excitation (SE) block, Atrous Spatial Pyramid Pooling (ASPP) and residual learning for accurate and robust liver CT segmentation, and the effectiveness of the proposed method was tested on two public datasets LiTS17 and SLiver07. Methods: A new network architecture called SAR-U-Net was designed. Firstly, the SE block is introduced to adaptively extract image features after each convolution in the U-Net encoder, while suppressing irrelevant regions, and highlightin…

用于肝癌定量的数字病理资源：包含数据集、基准和工具

A Digital Pathology Resource for Liver Cancer Quantification with Datasets, Benchmarks, and Tools

本文提出HepatoBench数据集及HepatoQuant工具，解决肝癌细粒度组织成分识别难题，提供统一的定量分析流程。

Automatic liver segmentation method in CT images

The aim of this work is to develop a method for automatic segmentation of the liver based on a priori knowledge of the image, such as location and shape of the liver.

Efficient liver segmentation with 3D CNN using computed tomography scans

The liver is one of the most critical metabolic organs in vertebrates due to its vital functions in the human body, such as detoxification of the blood from waste products and medications. Liver diseases due to liver tumors are one of the most common mortality reasons around the globe. Hence, detecting liver tumors in the early stages of tumor development is highly required as a critical part of medical treatment. Many imaging modalities can be used as aiding tools to detect liver tumors. Computed tomography (CT) is the most used imaging modality for soft tissue organs such as the liver. This …

RA V-Net: Deep learning network for automated liver segmentation

Accurate segmentation of the liver is a prerequisite for the diagnosis of disease. Automated segmentation is an important application of computer-aided detection and diagnosis of liver disease. In recent years, automated processing of medical images has gained breakthroughs. However, the low contrast of abdominal scan CT images and the complexity of liver morphology make accurate automatic segmentation challenging. In this paper, we propose RA V-Net, which is an improved medical image automatic segmentation model based on U-Net. It has the following three main innovations. CofRes Module (Compo…

Neural Network-Based Automatic Liver Tumor Segmentation With Random Forest-Based Candidate Filtering

We present a fully automatic method employing convolutional neural networks based on the 2D U-net architecture and random forest classifier to solve the automatic liver lesion segmentation problem of the ISBI 2017 Liver Tumor Segmentation Challenge (LiTS). In order to constrain the ROI in which the tumors could be located, a liver segmentation is performed first. For the organ segmentation, an ensemble of convolutional networks is trained to segment a liver using a set of 179 liver CT datasets from liver surgery planning. Inside of the liver ROI a neural network, trained using 127 challenge tr…

A New Three-stage Curriculum Learning Approach to Deep Network Based Liver Tumor Segmentation

Automatic segmentation of liver tumors in medical images is crucial for the computer-aided diagnosis and therapy. It is a challenging task, since the tumors are notoriously small against the background voxels. This paper proposes a new three-stage curriculum learning approach for training deep networks to tackle this small object segmentation problem. The learning in the first stage is performed on the whole input to obtain an initial deep network for tumor segmenta-tion. Then the second stage of learning focuses the strength-ening of tumor specific features by continuing training the network …

一种用于肝脏CT扫描中超高性能病灶检测和假阳性去除的级联方法

A Cascaded Approach for ultraly High Performance Lesion Detection and False Positive Removal in Liver CT Scans

针对肝脏CT图像中病灶差异大、检测难的问题，构建大规模多期CT数据集并提出两阶段级联检测流水线，通过高灵敏度检测与假阳性重分类算法，在诊断和筛查设置下均实现高精度恶性分类。

2D-Densely Connected Convolution Neural Networks for automatic Liver and Tumor Segmentation

In this paper we propose a fully automatic 2-stage cascaded approach for segmentation of liver and its tumors in CT (Computed Tomography) images using densely connected fully convolutional neural network (DenseNet). We independently train liver and tumor segmentation models and cascade them for a combined segmentation of the liver and its tumor. The first stage involves segmentation of liver and the second stage uses the first stage's segmentation results for localization of liver and henceforth tumor segmentations inside liver region. The liver model was trained on the down-sampled axial slic…

GAN-based Synthetic Medical Image Augmentation for increased CNN Performance in Liver Lesion Classification

Deep learning methods, and in particular convolutional neural networks (CNNs), have led to an enormous breakthrough in a wide range of computer vision tasks, primarily by using large-scale annotated datasets. However, obtaining such datasets in the medical domain remains a challenge. In this paper, we present methods for generating synthetic medical images using recently presented deep learning Generative Adversarial Networks (GANs). Furthermore, we show that generated medical images can be used for synthetic data augmentation, and improve the performance of CNN for medical image classificatio…

CAFCT-Net：一种用于肝肿瘤分割的融合上下文与注意力特征的CNN-Transformer混合网络

CAFCT-Net: A CNN-Transformer Hybrid Network with Contextual and Attentional Feature Fusion for Liver Tumor Segmentation

针对CT图像肝肿瘤自动分割问题，提出融合上下文与注意力特征的CNN-Transformer混合网络CAFCT-Net，通过引入AFF、ASPP、AG模块增强边界上下文信息，在LiTS数据集上取得优于纯CNN/Transformer方法的分割精度。

Hierarchical Convolutional-Deconvolutional Neural Networks for Automatic Liver and Tumor Segmentation

Automatic segmentation of liver and its tumors is an essential step for extracting quantitative imaging biomarkers for accurate tumor detection, diagnosis, prognosis and assessment of tumor response to treatment. MICCAI 2017 Liver Tumor Segmentation Challenge (LiTS) provides a common platform for comparing different automatic algorithms on contrast-enhanced abdominal CT images in tasks including 1) liver segmentation, 2) liver tumor segmentation, and 3) tumor burden estimation. We participate this challenge by developing a hierarchical framework based on deep fully convolutional-deconvolutiona…

Automatic Liver Lesion Segmentation Using A Deep Convolutional Neural Network Method

Liver lesion segmentation is an important step for liver cancer diagnosis, treatment planning and treatment evaluation. LiTS (Liver Tumor Segmentation Challenge) provides a common testbed for comparing different automatic liver lesion segmentation methods. We participate in this challenge by developing a deep convolutional neural network (DCNN) method. The particular DCNN model works in 2.5D in that it takes a stack of adjacent slices as input and produces the segmentation map corresponding to the center slice. The model has 32 layers in total and makes use of both long range concatenation con…

Co-Heterogeneous and Adaptive Segmentation from Multi-Source and Multi-Phase CT Imaging Data: A Study on Pathological Liver and Lesion Segmentation

In medical imaging, organ/pathology segmentation models trained on current publicly available and fully-annotated datasets usually do not well-represent the heterogeneous modalities, phases, pathologies, and clinical scenarios encountered in real environments. On the other hand, there are tremendous amounts of unlabelled patient imaging scans stored by many modern clinical centers. In this work, we present a novel segmentation strategy, co-heterogenous and adaptive segmentation (CHASe), which only requires a small labeled cohort of single phase imaging data to adapt to any unlabeled cohort of …

Conditional Generative Refinement Adversarial Networks for Unbalanced Medical Image Semantic Segmentation

We propose a new generative adversarial architecture to mitigate imbalance data problem in medical image semantic segmentation where the majority of pixels belongs to a healthy region and few belong to lesion or non-health region. A model trained with imbalanced data tends to bias toward healthy data which is not desired in clinical applications and predicted outputs by these networks have high precision and low sensitivity. We propose a new conditional generative refinement network with three components: a generative, a discriminative, and a refinement network to mitigate unbalanced data prob…

Automatic Liver and Lesion Segmentation in CT Using Cascaded Fully Convolutional Neural Networks and 3D Conditional Random Fields

Automatic segmentation of the liver and its lesion is an important step towards deriving quantitative biomarkers for accurate clinical diagnosis and computer-aided decision support systems. This paper presents a method to automatically segment liver and lesions in CT abdomen images using cascaded fully convolutional neural networks (CFCNs) and dense 3D conditional random fields (CRFs). We train and cascade two FCNs for a combined segmentation of the liver and its lesions. In the first step, we train a FCN to segment the liver as ROI input for a second FCN. The second FCN solely segments lesion…

End-to-End Adversarial Shape Learning for Abdomen Organ Deep Segmentation

Automatic segmentation of abdomen organs using medical imaging has many potential applications in clinical workflows. Recently, the state-of-the-art performance for organ segmentation has been achieved by deep learning models, i.e., convolutional neural network (CNN). However, it is challenging to train the conventional CNN-based segmentation models that aware of the shape and topology of organs. In this work, we tackle this problem by introducing a novel end-to-end shape learning architecture -- organ point-network. It takes deep learning features as inputs and generates organ shape represent…

ConvNet-Based Localization of Anatomical Structures in 3D Medical Images

Localization of anatomical structures is a prerequisite for many tasks in medical image analysis. We propose a method for automatic localization of one or more anatomical structures in 3D medical images through detection of their presence in 2D image slices using a convolutional neural network (ConvNet). A single ConvNet is trained to detect presence of the anatomical structure of interest in axial, coronal, and sagittal slices extracted from a 3D image. To allow the ConvNet to analyze slices of different sizes, spatial pyramid pooling is applied. After detection, 3D bounding boxes are created…

Automatic CT Segmentation from Bounding Box Annotations using Convolutional Neural Networks

Accurate segmentation for medical images is important for clinical diagnosis. Existing automatic segmentation methods are mainly based on fully supervised learning and have an extremely high demand for precise annotations, which are very costly and time-consuming to obtain. To address this problem, we proposed an automatic CT segmentation method based on weakly supervised learning, by which one could train an accurate segmentation model only with weak annotations in the form of bounding boxes. The proposed method is composed of two steps: 1) generating pseudo masks with bounding box annotation…

Hepatic vessel segmentation based on 3D swin-transformer with inductive biased multi-head self-attention

Purpose: Segmentation of liver vessels from CT images is indispensable prior to surgical planning and aroused broad range of interests in the medical image analysis community. Due to the complex structure and low contrast background, automatic liver vessel segmentation remains particularly challenging. Most of the related researches adopt FCN, U-net, and V-net variants as a backbone. However, these methods mainly focus on capturing multi-scale local features which may produce misclassified voxels due to the convolutional operator's limited locality reception field. Methods: We propose a robust…

Automatic Liver Lesion Detection using Cascaded Deep Residual Networks

Automatic segmentation of liver lesions is a fundamental requirement towards the creation of computer aided diagnosis (CAD) and decision support systems (CDS). Traditional segmentation approaches depend heavily upon hand-crafted features and a priori knowledge of the user. As such, these methods are difficult to adopt within a clinical environment. Recently, deep learning methods based on fully convolutional networks (FCNs) have been successful in many segmentation problems primarily because they leverage a large labelled dataset to hierarchically learn the features that best correspond to the…

Automatic 3D liver location and segmentation via convolutional neural networks and graph cut

Purpose Segmentation of the liver from abdominal computed tomography (CT) image is an essential step in some computer assisted clinical interventions, such as surgery planning for living donor liver transplant (LDLT), radiotherapy and volume measurement. In this work, we develop a deep learning algorithm with graph cut refinement to automatically segment liver in CT scans. Methods The proposed method consists of two main steps: (i) simultaneously liver detection and probabilistic segmentation using 3D convolutional neural networks (CNNs); (ii) accuracy refinement of initial segmentation with g…

Automatic 3D Liver Segmentation Using Sparse Representation of Global and Local Image Information via Level Set Formulation

In this paper, a novel framework for automated liver segmentation via a level set formulation is presented. A sparse representation of both global (region-based) and local (voxel-wise) image information is embedded in a level set formulation to innovate a new cost function. Two dictionaries are build: A region-based feature dictionary and a voxel-wise dictionary. These dictionaries are learned, using the K-SVD method, from a public database of liver segmentation challenge (MICCAI-SLiver07). The learned dictionaries provide prior knowledge to the level set formulation. For the quantitative eval…

Unsupervised domain adaptation for cross-modality liver segmentation via joint adversarial learning and self-learning

Liver segmentation on images acquired using computed tomography (CT) and magnetic resonance imaging (MRI) plays an important role in clinical management of liver diseases. Compared to MRI, CT images of liver are more abundant and readily available. However, MRI can provide richer quantitative information of the liver compared to CT. Thus, it is desirable to achieve unsupervised domain adaptation for transferring the learned knowledge from the source domain containing labeled CT images to the target domain containing unlabeled MR images. In this work, we report a novel unsupervised domain adapt…

3D Deeply Supervised Network for Automatic Liver Segmentation from CT Volumes

Automatic liver segmentation from CT volumes is a crucial prerequisite yet challenging task for computer-aided hepatic disease diagnosis and treatment. In this paper, we present a novel 3D deeply supervised network (3D DSN) to address this challenging task. The proposed 3D DSN takes advantage of a fully convolutional architecture which performs efficient end-to-end learning and inference. More importantly, we introduce a deep supervision mechanism during the learning process to combat potential optimization difficulties, and thus the model can acquire a much faster convergence rate and more po…

基于深度学习的kV触发图像中肝顶自动勾画，用于肝脏立体定向体部放射治疗在线屏气可重复性验证

Deep Learning-Based Automatic Delineation of Liver Domes in kV Triggered Images for Online Breath-hold Reproducibility Verification of Liver Stereotactic Body Radiation Therapy

本文提出基于U-Net的深度学习流程，从kV触发图像中自动勾画肝顶，用于肝癌SBRT在线屏气可重复性验证，在711幅图像上取得最快不到1秒的勾画速度，Fold1检出率91.7%、Fold2检出率76.3%。

Fully Automatic Liver Attenuation Estimation Combing CNN Segmentation and Morphological Operations

Manually tracing regions of interest (ROIs) within the liver is the de facto standard method for measuring liver attenuation on computed tomography (CT) in diagnosing nonalcoholic fatty liver disease (NAFLD). However, manual tracing is resource intensive. To address these limitations and to expand the availability of a quantitative CT measure of hepatic steatosis, we propose the automatic liver attenuation ROI-based measurement (ALARM) method for automated liver attenuation estimation. The ALARM method consists of two major stages: (1) deep convolutional neural network (DCNN)-based liver segme…

Decoupling Shape and Density for Liver Lesion Synthesis Using Conditional Generative Adversarial Networks

Lesion synthesis received much attention with the rise of efficient generative models for augmenting training data, drawing lesion evolution scenarios, or aiding expert training. The quality and diversity of synthesized data are highly dependent on the annotated data used to train the models, which not rarely struggle to derive very different yet realistic samples from the training ones. That adds an inherent bias to lesion segmentation algorithms and limits synthesizing lesion evolution scenarios efficiently. This paper presents a method for decoupling shape and density for liver lesion synth…

LiverUSRecon：基于少量部分超声扫描的肝脏自动3D重建与体积测量

LiverUSRecon: Automatic 3D Reconstruction and Volumetry of the Liver with a Few Partial Ultrasound Scans

提出首个基于少量不完整超声扫描和统计形状模型的自动肝脏3D重建与体积测量系统，其体积计算结果在统计学上与CT分割体积无显著差异。

Enabling Data Diversity: Efficient Automatic Augmentation via Regularized Adversarial Training

Data augmentation has proved extremely useful by increasing training data variance to alleviate overfitting and improve deep neural networks' generalization performance. In medical image analysis, a well-designed augmentation policy usually requires much expert knowledge and is difficult to generalize to multiple tasks due to the vast discrepancies among pixel intensities, image appearances, and object shapes in different medical tasks. To automate medical data augmentation, we propose a regularized adversarial training framework via two min-max objectives and three differentiable augmentation…

Adversarial attacks on deep learning models for fatty liver disease classification by modification of ultrasound image reconstruction method

Convolutional neural networks (CNNs) have achieved remarkable success in medical image analysis tasks. In ultrasound (US) imaging, CNNs have been applied to object classification, image reconstruction and tissue characterization. However, CNNs can be vulnerable to adversarial attacks, even small perturbations applied to input data may significantly affect model performance and result in wrong output. In this work, we devise a novel adversarial attack, specific to ultrasound (US) imaging. US images are reconstructed based on radio-frequency signals. Since the appearance of US images depends on …

利用深度与手工放射学特征指导3D CT扫描上的肝细胞癌分类

Guiding the classification of hepatocellular carcinoma on 3D CT-scans using deep and handcrafted radiological features

针对肝细胞癌CT诊断的医生间差异问题，受LI-RADS系统启发提出两步法，结合深度与手工放射学特征，在AUC上较深度学习基线提升6-18点，性能媲美专业放射科医生。

Liver Lesion Segmentation with slice-wise 2D Tiramisu and Tversky loss function

At present, lesion segmentation is still performed manually (or semi-automatically) by medical experts. To facilitate this process, we contribute a fully-automatic lesion segmentation pipeline. This work proposes a method as a part of the LiTS (Liver Tumor Segmentation Challenge) competition for ISBI 17 and MICCAI 17 comparing methods for automatics egmentation of liver lesions in CT scans. By utilizing cascaded, densely connected 2D U-Nets and a Tversky-coefficient based loss function, our framework achieves very good shape extractions with high detection sensitivity, with competitive scores …

Deep Learning-based Multi-Organ CT Segmentation with Adversarial Data Augmentation

In this work, we propose an adversarial attack-based data augmentation method to improve the deep-learning-based segmentation algorithm for the delineation of Organs-At-Risk (OAR) in abdominal Computed Tomography (CT) to facilitate radiation therapy. We introduce Adversarial Feature Attack for Medical Image (AFA-MI) augmentation, which forces the segmentation network to learn out-of-distribution statistics and improve generalization and robustness to noises. AFA-MI augmentation consists of three steps: 1) generate adversarial noises by Fast Gradient Sign Method (FGSM) on the intermediate featu…

Transformer based Generative Adversarial Network for Liver Segmentation

Automated liver segmentation from radiology scans (CT, MRI) can improve surgery and therapy planning and follow-up assessment in addition to conventional use for diagnosis and prognosis. Although convolutional neural networks (CNNs) have become the standard image segmentation tasks, more recently this has started to change towards Transformers based architectures because Transformers are taking advantage of capturing long range dependence modeling capability in signals, so called attention mechanism. In this study, we propose a new segmentation approach using a hybrid approach combining the Tr…

Feature Fusion Encoder Decoder Network For Automatic Liver Lesion Segmentation

Liver lesion segmentation is a difficult yet critical task for medical image analysis. Recently, deep learning based image segmentation methods have achieved promising performance, which can be divided into three categories: 2D, 2.5D and 3D, based on the dimensionality of the models. However, 2.5D and 3D methods can have very high complexity and 2D methods may not perform satisfactorily. To obtain competitive performance with low complexity, in this paper, we propose a Feature-fusion Encoder-Decoder Network (FED-Net) based 2D segmentation model to tackle the challenging problem of liver lesion…

Automatic segmentation and determining radiodensity of the liver in a large-scale CT database

This study proposes an automatic technique for liver segmentation in computed tomography (CT) images. Localization of the liver volume is based on the correlation with an optimized set of liver templates developed by the authors that allows clear geometric interpretation. Radiodensity values are calculated based on the boundaries of the segmented liver, which allows identifying liver abnormalities. The performance of the technique was evaluated on 700 CT images from dataset of the Unified Radiological Information System (URIS) of Moscow. Despite the decrease in accuracy, the technique is appli…

ASC-Net: Unsupervised Medical Anomaly Segmentation Using an Adversarial-based Selective Cutting Network

In this paper we consider the problem of unsupervised anomaly segmentation in medical images, which has attracted increasing attention in recent years due to the expensive pixel-level annotations from experts and the existence of a large amount of unannotated normal and abnormal image scans. We introduce a segmentation network that utilizes adversarial learning to partition an image into two cuts, with one of them falling into a reference distribution provided by the user. This Adversarial-based Selective Cutting network (ASC-Net) bridges the two domains of cluster-based deep segmentation and …

Multi-Slice Low-Rank Tensor Decomposition Based Multi-Atlas Segmentation: Application to Automatic Pathological Liver CT Segmentation

Liver segmentation from abdominal CT images is an essential step for liver cancer computer-aided diagnosis and surgical planning. However, both the accuracy and robustness of existing liver segmentation methods cannot meet the requirements of clinical applications. In particular, for the common clinical cases where the liver tissue contains major pathology, current segmentation methods show poor performance. In this paper, we propose a novel low-rank tensor decomposition (LRTD) based multi-atlas segmentation (MAS) framework that achieves accurate and robust pathological liver segmentation of C…

Multi-Modal Active Learning for Automatic Liver Fibrosis Diagnosis based on Ultrasound Shear Wave Elastography

With the development of radiomics, noninvasive diagnosis like ultrasound (US) imaging plays a very important role in automatic liver fibrosis diagnosis (ALFD). Due to the noisy data, expensive annotations of US images, the application of Artificial Intelligence (AI) assisting approaches encounters a bottleneck. Besides, the use of mono-modal US data limits the further improve of the classification results. In this work, we innovatively propose a multi-modal fusion network with active learning (MMFN-AL) for ALFD to exploit the information of multiple modalities, eliminate the noisy data and red…

EAR-U-Net: EfficientNet and attention-based residual U-Net for automatic liver segmentation in CT

Purpose: This paper proposes a new network framework called EAR-U-Net, which leverages EfficientNetB4, attention gate, and residual learning techniques to achieve automatic and accurate liver segmentation. Methods: The proposed method is based on the U-Net framework. First, we use EfficientNetB4 as the encoder to extract more feature information during the encoding stage. Then, an attention gate is introduced in the skip connection to eliminate irrelevant regions and highlight features of a specific segmentation task. Finally, to alleviate the problem of gradient vanishment, we replace the tra…

Liver segmentation in CT images using three dimensional to two dimensional fully convolutional network

The need for CT scan analysis is growing for pre-diagnosis and therapy of abdominal organs. Automatic organ segmentation of abdominal CT scan can help radiologists analyze the scans faster and segment organ images with fewer errors. However, existing methods are not efficient enough to perform the segmentation process for victims of accidents and emergencies situations. In this paper we propose an efficient liver segmentation with our 3D to 2D fully connected network (3D-2D-FCN). The segmented mask is enhanced by means of conditional random field on the organ's border. Consequently, we segment…

用于高加速肝脏4D MRI的配对条件生成对抗网络

Paired Conditional Generative Adversarial Network for Highly Accelerated Liver 4D MRI

针对肝脏4D MRI加速重建的质量与速度瓶颈，提出Re-Con-GAN配对条件生成对抗网络，在3-10倍欠采样下实现媲美或优于传统方法的重建质量，推理速度较CS方法提升三个数量级，可助力肝癌在线自适应MR引导放疗。

Automatic Liver Segmentation from CT Images Using Deep Learning Algorithms: A Comparative Study

Medical imaging has been employed to support medical diagnosis and treatment. It may also provide crucial information to surgeons to facilitate optimal surgical preplanning and perioperative management. Essentially, semi-automatic organ and tumor segmentation has been studied by many researchers. Recently, with the development of Deep Learning (DL) algorithms, automatic organ segmentation has been gathered lots of attention from the researchers. This paper addresses to propose the most efficient DL architectures for Liver segmentation by adapting and comparing state-of-the-art DL frameworks, s…

对抗多任务学习用于肝肿瘤分割、动态增强回归和分类

Adversarial Multi-Task Learning for Liver Tumor Segmentation, Dynamic Enhancement Regression, and Classification

MTI-Net通过多任务交互对抗学习框架，同时实现肝肿瘤分割、动态增强回归和分类，提升任务间协同性能。

Free-form Lesion Synthesis Using a Partial Convolution Generative Adversarial Network for Enhanced Deep Learning Liver Tumor Segmentation

Automatic deep learning segmentation models has been shown to improve both the segmentation efficiency and the accuracy. However, training a robust segmentation model requires considerably large labeled training samples, which may be impractical. This study aimed to develop a deep learning framework for generating synthetic lesions that can be used to enhance network training. The lesion synthesis network is a modified generative adversarial network (GAN). Specifically, we innovated a partial convolution strategy to construct an Unet-like generator. The discriminator is designed using Wasserst…

用于脂肪肝检测的鲁棒优化深度特征解耦网络

Robustly Optimized Deep Feature Decoupling Network for Fatty Liver Diseases Detection

本文提出结合特征解耦与自适应对抗训练的深度学习框架，通过迭代压缩解耦器分离脂肪肝超声图像特征并平衡对抗强度，有效消除分类器识别弱点，将准确率提升至82.95%。

Liver Segmentation in Abdominal CT Images by Adaptive 3D Region Growing

Automatic liver segmentation plays an important role in computer-aided diagnosis and treatment. Manual segmentation of organs is a difficult and tedious task and so prone to human errors. In this paper, we propose an adaptive 3D region growing with subject-specific conditions. For this aim we use the intensity distribution of most probable voxels in prior map along with location prior. We also incorporate the boundary of target organs to restrict the region growing. In order to obtain strong edges and high contrast, we propose an effective contrast enhancement algorithm to facilitate more accu…