In the Shortest Superstring problem we are given a set of strings $S=\{s_1, \ldots, s_n\}$ and integer $\ell$ and the question is to decide whether there is a superstring $s$ of length at most $\ell$ containing all strings of $S$ as substrings. We obtain several parameterized algorithms and complexity results for this problem.
In particular, we give an algorithm which in time $2^{O(k)} \operatorname{poly}(n)$ finds a superstring of length at most $\ell$ containing at least $k$ strings of $S$. We complement this by the lower bound showing that such a parameterization does not admit a polynomial kernel up to some complexity assumption. We also obtain several results about "below guaranteed values" parameterization of the problem. We show that parameterization by compression admits a polynomial kernel while parameterization "below matching" is hard.
We study the parameterized complexity of separating a small set of vertices from a graph by a small vertex-separator. That is, given a graph $G$ and integers $k$, $t$, the task is to find a vertex set $X$ with $|X| \le k$ and $|N(X)| \le t$. We show that - the problem is fixed-parameter tractable (FPT) when parameterized by $t$ but W[1]-hard when parameterized by $k$, and - a terminal variant of the problem, where $X$ must contain a given vertex $s$, is W[1]-hard when parameterized either by $k$ or by $t$ alone, but is FPT when parameterized by $k + t$. We also show that if we consider edge cu…
Given a graph $G = (V,E)$, $A \subseteq V$, and integers $k$ and $\ell$, the \textsc{$(A,\ell)$-Path Packing} problem asks to find $k$ vertex-disjoint paths of length $\ell$ that have endpoints in $A$ and internal points in $V \setminus A$. We study the parameterized complexity of this problem with parameters $|A|$, $\ell$, $k$, treewidth, pathwidth, and their combinations. We present sharp complexity contrasts with respect to these parameters. Among other results, we show that the problem is polynomial-time solvable when $\ell \le 3$, while it is NP-complete for constant $\ell \ge 4$. We also…
Graph Burning asks, given a graph $G = (V,E)$ and an integer $k$, whether there exists $(b_{0},\dots,b_{k-1}) \in V^{k}$ such that every vertex in $G$ has distance at most $i$ from some $b_{i}$. This problem is known to be NP-complete even on connected caterpillars of maximum degree $3$. We study the parameterized complexity of this problem and answer all questions arose by Kare and Reddy [IWOCA 2019] about parameterized complexity of the problem. We show that the problem is W[2]-complete parameterized by $k$ and that it does no admit a polynomial kernel parameterized by vertex cover number un…
We study fundamental clustering problems for incomplete data. Specifically, given a set of incomplete d-dimensional vectors (representing rows of a matrix), the goal is to complete the missing vector entries in a way that admits a partitioning of the vectors into at most $k$ clusters with radius or diameter at most r. We give tight characterizations of the parameterized complexity of these problems with respect to the parameters k, r, and the minimum number of rows and columns needed to cover all the missing entries. We show that the considered problems are fixed-parameter tractable when param…
We consider the problem of finding a 1-planar drawing for a general graph, where a 1-planar drawing is a drawing in which each edge participates in at most one crossing. Since this problem is known to be NP-hard we investigate the parameterized complexity of the problem with respect to the vertex cover number, tree-depth, and cyclomatic number. For these parameters we construct fixed-parameter tractable algorithms. However, the problem remains NP-complete for graphs of bounded bandwidth, pathwidth, or treewidth.
Given a graph $G=(V,E)$ and an integer $k$, the Minimum Membership Dominating Set (MMDS) problem seeks to find a dominating set $S \subseteq V$ of $G$ such that for each $v \in V$, $|N[v] \cap S|$ is at most $k$. We investigate the parameterized complexity of the problem and obtain the following results about MMDS: W[1]-hardness of the problem parameterized by the pathwidth (and thus, treewidth) of the input graph. W[1]-hardness parameterized by $k$ on split graphs. An algorithm running in time $2^{\mathcal{O}(\textbf{vc})} |V|^{\mathcal{O}(1)}$, where $\textbf{vc}$ is the size of a minimum-si…
In this paper we study a maximization version of the classical Edge Dominating Set (EDS) problem, namely, the Upper EDS problem, in the realm of Parameterized Complexity. In this problem, given an undirected graph $G$, a positive integer $k$, the question is to check whether $G$ has a minimal edge dominating set of size at least $k$. We obtain the following results for Upper EDS. We prove that Upper EDS admits a kernel with at most $4k^2-2$ vertices. We also design a fixed-parameter tractable (FPT) algorithm for Upper EDS running in time $2^{\mathcal{O}(k)} \cdot n^{\mathcal{O}(1)}$.
A vertex set $S$ of a graph $G$ is geodetic if every vertex of $G$ lies on a shortest path between two vertices in $S$. Given a graph $G$ and $k \in \mathbb N$, the NP-hard Geodetic Set problem asks whether there is a geodetic set of size at most $k$. Complementing various works on Geodetic Set restricted to special graph classes, we initiate a parameterized complexity study of Geodetic Set and show, on the negative side, that Geodetic Set is W[1]-hard when parameterized by feedback vertex number, path-width, and solution size, combined. On the positive side, we develop fixed-parameter algorit…
The present paper makes a study on Partition sort algorithm for negative binomial inputs. Comparing the results with those for binomial inputs in our previous work, we find that this algorithm is sensitive to parameters of both distributions. But the main effects as well as the interaction effects involving these parameters and the input size are more significant for negative binomial case.
We prove that finding a $k$-edge induced subgraph is fixed-parameter tractable, thereby answering an open problem of Leizhen Cai. Our algorithm is based on several combinatorial observations, Gauss' famous \emph{Eureka} theorem [Andrews, 86], and a generalization of the well-known fpt-algorithm for the model-checking problem for first-order logic on graphs with locally bounded tree-width due to Frick and Grohe [Frick and Grohe, 01]. On the other hand, we show that two natural counting versions of the problem are hard. Hence, the $k$-edge induced subgraph problem is one of the rare known exampl…
The parameterized complexity of problems is often studied with respect to the size of their optimal solutions. However, for a maximization problem, the size of the optimal solution can be very large, rendering algorithms parameterized by it inefficient. Therefore, we suggest to study the parameterized complexity of maximization problems with respect to the size of the optimal solutions to their minimization versions. We examine this suggestion by considering the Maximal Minimal Vertex Cover (MMVC) problem, whose minimization version, Vertex Cover, is one of the most studied problems in the fie…
Microarrays are research tools used in gene discovery as well as disease and cancer diagnostics. Two prominent but challenging problems related to microarrays are the Border Minimization Problem (BMP) and the Border Minimization Problem with given placement (P-BMP). In this paper we investigate the parameterized complexity of natural variants of BMP and P-BMP under several natural parameters. We show that BMP and P-BMP are in FPT under the following two combinations of parameters: 1) the size of the alphabet (c), the maximum length of a sequence (string) in the input (l) and the number of rows…
Diameter -- the task of computing the length of a longest shortest path -- is a fundamental graph problem. Assuming the Strong Exponential Time Hypothesis, there is no $O(n^{1.99})$-time algorithm even in sparse graphs [Roditty and Williams, 2013]. To circumvent this lower bound we aim for algorithms with running time $f(k)(n+m)$ where $k$ is a parameter and $f$ is a function as small as possible. We investigate which parameters allow for such running times. To this end, we systematically explore a hierarchy of structural graph parameters.
We study the problem Symmetric Directed Multicut from a parameterized complexity perspective. In this problem, the input is a digraph $D$, a set of cut requests $C=\{(s_1,t_1),\ldots,(s_\ell,t_\ell)\}$ and an integer $k$, and the task is to find a set $X \subseteq V(D)$ of size at most $k$ such that for every $1 \leq i \leq \ell$, $X$ intersects either all $(s_i,t_i)$-paths or all $(t_i,s_i)$-paths. Equivalently, every strongly connected component of $D-X$ contains at most one vertex out of $s_i$ and $t_i$ for every $i$. This problem is previously known from research in approximation algorithm…
We investigate parameterized algorithms for the NP-hard problem Min-Power Asymmetric Connectivity (MinPAC) that has applications in wireless sensor networks. Given a directed arc-weighted graph, MinPAC asks for a strongly connected spanning subgraph minimizing the summed vertex costs. Here, the cost of each vertex is the weight of its heaviest outgoing arc in the chosen subgraph. We present linear-time algorithms for the cases where the number of strongly connected components in a so-called obligatory subgraph or the feedback edge number in the underlying undirected graph is constant. Compleme…
Given a directed graph $D$ on $n$ vertices and a positive integer $k$, the Arc-Disjoint Cycle Packing problem is to determine whether $D$ has $k$ arc-disjoint cycles. This problem is known to be W[1]-hard in general directed graphs. In this paper, we initiate a systematic study on the parameterized complexity of the problem restricted to tournaments. We show that the problem is fixed-parameter tractable and admits a polynomial kernel when parameterized by the solution size $k$. In particular, we show that it can be solved in $2^{\mathcal{O}(k \log k)} n^{\mathcal{O}(1)}$ time and has a kernel …
We show that the Minimal Length-Bounded L-But problem can be computed in linear time with respect to L and the tree-width of the input graph as parameters. In this problem the task is to find a set of edges of a graph such that after removal of this set, the shortest path between two prescribed vertices is at least L long. We derive an FPT algorithm for a more general multi-commodity length bounded cut problem when parameterized by the number of terminals also. For the former problem we show a W[1]-hardness result when the parameterization is done by the path-width only (instead of the tree-wi…
Bhawalkar, Kleinberg, Lewi, Roughgarden, and Sharma [ICALP 2012] introduced the Anchored k-Core problem, where the task is for a given graph G and integers b, k, and p to find an induced subgraph H with at least p vertices (the core) such that all but at most b vertices (called anchors) of H are of degree at least k. In this paper, we extend the notion of k-core to directed graphs and provide a number of new algorithmic and complexity results for the directed version of the problem. We show that - The decision version of the problem is NP-complete for every k>=1 even if the input graph is rest…
Parameterized complexity theory was developed in the 1990s to enrich the complexity-theoretic analysis of problems that depend on a range of parameters. In this paper we establish a quantum equivalent of classical parameterized complexity theory, motivated by the need for new tools for the classifications of the complexity of real-world problems. We introduce the quantum analogues of a range of parameterized complexity classes and examine the relationship between these classes, their classical counterparts, and well-studied problems. This framework exposes a rich classification of the complexi…
We study the parameterized complexity of the $s$-Club Cluster Edge Deletion problem: Given a graph $G$ and two integers $s \ge 2$ and $k \ge 1$, is it possible to remove at most $k$ edges from $G$ such that each connected component of the resulting graph has diameter at most $s$? This problem is known to be NP-hard already when $s = 2$. We prove that it admits a fixed-parameter tractable algorithm when parameterized by $s$ and the treewidth of the input graph.
We study a natural variant of scheduling that we call \emph{partial scheduling}: In this variant an instance of a scheduling problem along with an integer $k$ is given and one seeks an optimal schedule where not all, but only $k$ jobs, have to be processed. Specifically, we aim to determine the fine-grained parameterized complexity of partial scheduling problems parameterized by $k$ for all variants of scheduling problems that minimize the makespan and involve unit/arbitrary processing times, identical/unrelated parallel machines, release/due dates, and precedence constraints. That is, we inve…
The survey provides an overview of the developing area of parameterized algorithms for graph modification problems. We concentrate on edge modification problems, where the task is to change a small number of adjacencies in a graph in order to satisfy some required property.
Powerful results from the theory of integer programming have recently led to substantial advances in parameterized complexity. However, our perception is that, except for Lenstra's algorithm for solving integer linear programming in fixed dimension, there is still little understanding in the parameterized complexity community of the strengths and limitations of the available tools. This is understandable: it is often difficult to infer exact runtimes or even the distinction between FPT and XP algorithms, and some knowledge is simply unwritten folklore in a different community. We wish to make …
The s-Club problem asks, for a given undirected graph $G$, whether $G$ contains a vertex set $S$ of size at least $k$ such that $G[S]$, the subgraph of $G$ induced by $S$, has diameter at most $s$. We consider variants of $s$-Club where one additionally demands that each vertex of $G[S]$ is contained in at least $\ell$ triangles in $G[S]$, that each edge of $G[S]$ is contained in at least $\ell$~triangles in $G[S]$, or that $S$ contains a given set $W$ of seed vertices. We show that in general these variants are W[1]-hard when parameterized by the solution size $k$, making them significantly h…
Scheduling theory is an old and well-established area in combinatorial optimization, whereas the much younger area of parameterized complexity has only recently gained the attention of the community. Our aim is to bring these two areas closer together by studying the parameterized complexity of a class of single-machine two-agent scheduling problems. Our analysis focuses on the case where the number of jobs belonging to the second agent is considerably smaller than the number of jobs belonging to the first agent, and thus can be considered as a fixed parameter k. We study a variety of combinat…
The k-Clique problem is a fundamental combinatorial problem that plays a prominent role in classical as well as in parameterized complexity theory. It is among the most well-known NP-complete and W[1]-complete problems. Moreover, its average-case complexity analysis has created a long thread of research already since the 1970s. Here, we continue this line of research by studying the dependence of the average-case complexity of the k-Clique problem on the parameter k. To this end, we define two natural parameterized analogs of efficient average-case algorithms. We then show that k-Clique admits…
We show that the $b$-Coloring problem is complete for the class XNLP when parameterized by the pathwidth of the input graph. Besides determining the precise parameterized complexity of this problem, this implies that b-Coloring parameterized by pathwidth is $W[t]$-hard for all $t$, and resolves the parameterized complexity of $b$-Coloring parameterized by treewidth.
For every fixed integer $k \geq 1$, we prove that $k$-Edge Colouring is fixed-parameter-tractable when parameterized by the number of vertices of maximum degree.
Parameterization and approximation are two popular ways of coping with NP-hard problems. More recently, the two have also been combined to derive many interesting results. We survey developments in the area both from the algorithmic and hardness perspectives, with emphasis on new techniques and potential future research directions.
For a family of graphs $\cal F$, the $\mathcal{F}$-Contraction problem takes as an input a graph $G$ and an integer $k$, and the goal is to decide if there exists $S \subseteq E(G)$ of size at most $k$ such that $G/S$ belongs to $\cal F$. Here, $G/S$ is the graph obtained from $G$ by contracting all the edges in $S$. Heggernes et al.~[Algorithmica (2014)] were the first to study edge contraction problems in the realm of Parameterized Complexity. They studied $\cal F$-Contraction when $\cal F$ is a simple family of graphs such as trees and paths. In this paper, we study the $\mathcal{F}$-Contra…
Machine scheduling problems are a long-time key domain of algorithms and complexity research. A novel approach to machine scheduling problems are fixed-parameter algorithms. To stimulate this thriving research direction, we propose 15 open questions in this area whose resolution we expect to lead to the discovery of new approaches and techniques both in scheduling and parameterized complexity theory.
A set $S$ of vertices of a graph is a defensive alliance if, for each element of $S$, the majority of its neighbours is in $S$. We consider the notion of local minimality in this paper. We are interested in locally minimal defensive alliance of maximum size. We also look at connected version of defensive alliance. This problem is known to be NP-hard but its parameterized complexity remains open until now. We enhance our understanding of the problem from the viewpoint of parameterized complexity. The main results of the paper are the following: (1) Locally Minimal Defensive Alliance is NP-compl…
We consider the problems of deciding whether an input graph can be modified by removing/adding at most k vertices/edges such that the result of the modification satisfies some property definable in first-order logic. We establish a number of sufficient and necessary conditions on the quantification pattern of the first-order formula ϕfor the problem to be fixed-parameter tractable or to admit a polynomial kernel.
Linköping University（林雪平大学）；Masaryk University（马萨里克大学）；Vienna University of Technology（维也纳工业大学）
The propositional planning problem is a notoriously difficult computational problem, which remains hard even under strong syntactical and structural restrictions. Given its difficulty it becomes natural to study planning in the context of parameterized complexity. In this paper we continue the work initiated by Downey, Fellows and Stege on the parameterized complexity of planning with respect to the parameter "length of the solution plan." We provide a complete classification of the parameterized complexity of the planning problem under two of the most prominent syntactical restrictions, i.e.,…
We complement the recent algorithmic result that Feedback Vertex Set is XP-time solvable parameterized by the mim-width of a given branch decomposition of the input graph [3] by showing that the problem is W[1]-hard in this parameterization. The hardness holds even for linear mim-width, as well as for H-graphs, where the parameter is the number of edges in H. To obtain this result, we adapt a reduction due to Fomin, Golovach and Raymond [2], following the same line of reasoning but adding a new gadget.
We present the first results on the parameterized complexity of reconfiguration problems, where a reconfiguration version of an optimization problem $Q$ takes as input two feasible solutions $S$ and $T$ and determines if there is a sequence of {\em reconfiguration steps} that can be applied to transform $S$ into $T$ such that each step results in a feasible solution to $Q$. For most of the results in this paper, $S$ and $T$ are subsets of vertices of a given graph and a reconfiguration step adds or deletes a vertex. Our study is motivated by recent results establishing that for most NP-hard pr…
Parameterized complexity allows us to analyze the time complexity of problems with respect to a natural parameter depending on the problem. Reoptimization looks for solutions or approximations for problem instances when given solutions to neighboring instances. We try to combine both techniques, in order to better classify the complexity of problems in the parameterized setting. Specifically, we see that some problems in the class of compositional problems, which do not have polynomial kernels under standard complexity-theoretic assumptions, do have polynomial kernels under reoptimization for …
For two integers $r, \ell \geq 0$, a graph $G = (V, E)$ is an $(r,\ell)$-graph if $V$ can be partitioned into $r$ independent sets and $\ell$ cliques. In the parameterized $(r,\ell)$-Vertex Deletion problem, given a graph $G$ and an integer $k$, one has to decide whether at most $k$ vertices can be removed from $G$ to obtain an $(r,\ell)$-graph. This problem is NP-hard if $r+\ell \geq 1$ and encompasses several relevant problems such as Vertex Cover and Odd Cycle Transversal. The parameterized complexity of $(r,\ell)$-Vertex Deletion was known for all values of $(r,\ell)$ except for $(2,1)$, $…
We consider the following problem called the $k$-Chinese Postman Problem ($k$-CPP): given a connected edge-weighted graph $G$ and integers $p$ and $k$, decide whether there are at least $k$ closed walks such that every edge of $G$ is contained in at least one of them and the total weight of the edges in the walks is at most $p$? The problem $k$-CPP is NP-complete, and van Bevern et al. (to appear) and Sorge (2013) asked whether the $k$-CPP is fixed-parameter tractable when parameterized by $k$. We prove that the $k$-CPP is indeed fixed-parameter tractable. In fact, we prove a stronger result: …
Today's propositional satisfiability (SAT) solvers are extremely powerful and can be used as an efficient back-end for solving NP-complete problems. However, many fundamental problems in knowledge representation and reasoning are located at the second level of the Polynomial Hierarchy or even higher, and hence polynomial-time transformations to SAT are not possible, unless the hierarchy collapses. Recent research shows that in certain cases one can break through these complexity barriers by fixed-parameter tractable (fpt) reductions which exploit structural aspects of problem instances in term…
We consider the algorithmic complexity of recognizing bipartite temporal graphs. Rather than defining these graphs solely by their underlying graph or individual layers, we define a bipartite temporal graph as one in which every layer can be 2-colored in a way that results in few changes between any two consecutive layers. This approach follows the framework of multistage problems that has received a growing amount of attention in recent years. We investigate the complexity of recognizing these graphs. We show that this problem is NP-hard even if there are only two layers or if only one change…
In the Mixed Chinese Postman Problem (MCPP), given an edge-weighted mixed graph $G$ ($G$ may have both edges and arcs), our aim is to find a minimum weight closed walk traversing each edge and arc at least once. The MCPP parameterized by the number of edges was known to be fixed-parameter tractable using a simple argument. Solving an open question of van Bevern et al., we prove that the MCPP parameterized by the number of arcs is also fixed-parameter tractable. Our proof is more involved and, in particular, uses a well-known result of Marx, O'Sullivan and Razgon (2013) on the treewidth of tors…
