Consider a graph G = G(k,d,s) with vertex set the set of all k-letter words over an alphabet of size d. An edge e = vw is in E iff v is distinct from w and the last(first) k-s letters of v are identical to the first(last) k-s letters of w. In this paper we show that G is Hamiltonian for all non-trivial values of the parameters and obtain exact values for its chromatic number when s is greater than or equal to k/2. We also obtain bounds when the chromatic number is less than k/2.
Let $X$ be a subgroup of the full automorphism group of the Hamming graph $H(m,q)$, and $C$ a subset of the vertices of the Hamming graph. We say that $C$ is an \emph{$(X,2)$-neighbour transitive code} if $X$ is transitive on $C$, as well as $C_1$ and $C_2$, the sets of vertices which are distance $1$ and $2$ from the code. This paper begins the classification of $(X,2)$-neighbour transitive codes where the action of $X$ on the entries of the Hamming graph has a non-trivial kernel. There exists a subgroup of $X$ with a $2$-transitive action on the alphabet; this action is thus almost-simple or…
A de Bruijn sequence of order n over a k-symbol alphabet is a circular sequence where each length-n sequence occurs exactly once. We present a way of extending de Bruijn sequences by adding a new symbol to the alphabet: the extension is performed by embedding a given de Bruijn sequence into another one of the same order, but over the alphabet with one more symbol, while ensuring that there are no long runs without the new symbol. Our solution is based on auxiliary graphs derived from the de Bruijn graph and solving a problem of maximum flow.
In this short note, we first associate a new simple undirected graph with a given word over an ordered alphabet of $n$-letters. We will call it the Lyndon graph of that word. Then, we introduce the concept of the Lyndon-word representable graph as a graph isomorphic to a Lyndon graph of some word. Then, we introduce the generalized Stirling cycle number $S(N;n,k)$ as the number words of length $N$ with $k$ distinct Lydon words in their Lyndon factorization over an ordered alphabet of $n$-letters . Finally, we conclude the paper with several interesting open questions and conjectures for intere…
The dynamical properties of finite dynamical systems (FDSs) have been investigated in the context of coding theoretic problems, such as network coding, and in the context of hat games, such as the guessing game and Winkler's hat game. The instability of an FDS is the minimum Hamming distance between a state and its image under the FDS, while the stability is the minimum of the reciprocal of the Hamming distance; they are both directly related to Winkler's hat game. In this paper, we study the value of the (in)stability of FDSs with prescribed interaction graphs. The first main contribution of …
We consider words over a binary alphabet. A word $w$ is overlap-free if it does not have factors (blocks of consecutive letters) of the form $uvuvu$ for nonempty $u$. Let $M(w)$ denote the number of positions that are middle positions of squares in $w$. We show that for overlap-free binary words, $2M(w) \le |w|+3$, and that there are infinitely many overlap-free binary words for which $2M(w)=|w|+3$.
Let $Λ^{\ast}$ be the free monoid of (finite) words over a not necessarily finite alphabet $Λ$, which is equipped with some (partial) order. This ordering lifts to $Λ^{\ast}$, where it extends the divisibility ordering of words. The MacNeille completion of $Λ^{\ast}$ constitutes a complete lattice ordered monoid and is realized by the system of "closed" lower sets in $Λ^*$ (ordered by inclusion) or its isomorphic copy formed of the "closed" upper sets (ordered by reverse inclusion). Under some additional hypothesis on $Λ$, one can easily identify the closed lower sets as the finitely generated…
We consider a communication network where there exist wiretappers who can access a subset of channels, called a wiretap set, which is chosen from a given collection of wiretap sets. The collection of wiretap sets can be arbitrary. Secure network coding is applied to prevent the source information from being leaked to the wiretappers. In secure network coding, the required alphabet size is an open problem not only of theoretical interest but also of practical importance, because it is closely related to the implementation of such coding schemes in terms of computational complexity and storage r…
The nodes of the de Bruijn graph B(d,3) consist of all strings of length 3, taken from an alphabet of size d, with edges between words which are distinct substrings of a word of length 4. We give an inductive characterization of the maximum independent sets of the de Bruijn graphs B(d,3) and for the de Bruijn graph of diameter three with loops removed, for arbitrary alphabet size. We derive a recurrence relation and an exponential generating function for their number. This recurrence allows us to construct exponentially many comma-free codes of length 3 with maximal cardinality.
A word-graph Gw is a digraph represented by a word w such that the vertex-set V(Gw) is the alphabet of w and the edge-set E(Gw) is determined by non-identical adjacent letter pairs in w. In this paper we study the strong-connectivity of word-graphs. Our main result is that the number of strongly connected word-graphs represented by l-words of over an n-alphabet can be expressed via a recurrence relation T(l,n) on the Stirling numbers of the second kind using a link between word partitions and digraph connectivity.
The simple connected graphs may be classified by their cycle composition (number and lengths of cycles). This work derives the counting series of the simple connected graphs that have cycles of unrestricted number and length, but no overlapping cycles. Cycle pairs of these graphs of interest must not have common nodes or edges. The recipe of counting these graphs is based on the counting series of the associated planted graphs, multisets of planted graphs, a recursive synthesis of enriched trees, and a generalized Otter's formula that maps the underlying rooted block graphs to the underlying b…
We study an infinite set of graphs which are recursively constructed from an infinite word in a finite alphabet. These graphs are inspired by the construction of the Sierpiński gasket. We show that there are infinitely many non-isomorphic such graphs and we describe the horofunctions on the standard case.
An Automata Network is a map ${f:Q^n\rightarrow Q^n}$ where $Q$ is a finite alphabet. It can be viewed as a network of $n$ entities, each holding a state from $Q$, and evolving according to a deterministic synchronous update rule in such a way that each entity only depends on its neighbors in the network's graph, called interaction graph. A major trend in automata network theory is to understand how the interaction graph affects dynamical properties of $f$. In this work we introduce the following property called expansivity: the observation of the sequence of states at any given node is suffic…
An integer array y = y[1..n] is said to be feasible if and only if y[1] = n and, for every i \in 2..n, i \le i+y[i] \le n+1. A string is said to be indeterminate if and only if at least one of its elements is a subset of cardinality greater than one of a given alphabet Sigma; otherwise it is said to be regular. A feasible array y is said to be regular if and only if it is the prefix array of some regular string. We show using a graph model that every feasible array of integers is a prefix array of some (indeterminate or regular) string, and for regular strings corresponding to y, we use the mo…
An {\it overlap representation} of a graph $G$ assigns sets to vertices so that vertices are adjacent if and only if their assigned sets intersect with neither containing the other. The {\it overlap number} $\ol(G)$ (introduced by Rosgen) is the minimum size of the union of the sets in such a representation. We prove the following: (1) An optimal overlap representation of a tree can be produced in linear time, and its size is the number of vertices in the largest subtree in which the neighbor of any leaf has degree 2. (2) If $δ(G)\ge 2$ and $G\ne K_3$, then $\ol(G)\le |E(G)|-1$, with equality …
For every graph $G$, let $α(G)$ denote its independence number. What is the minimum of the maximum degree of an induced subgraph of $G$ with $α(G)+1$ vertices? We study this question for the $n$-dimensional Hamming graph over an alphabet of size $k$. In this paper, we give a construction to prove that the answer is $1$ for all $n$ and $k$ with $k \geq 3$. This is an improvement over an earlier work showing that the answer is at most $\lceil \sqrt{n} \, \rceil$.
A finite dynamical system (FDS) is a system of multivariate functions over a finite alphabet, that is typically used to model a network of interacting entities. The main feature of a finite dynamical system is its interaction graph, which indicates which local functions depend on which variables; the interaction graph is a qualitative representation of the interactions amongst entities on the network. As such, a major problem is to determine the effect of the interaction graph on the dynamics of the FDS. In this paper, we are interested in three main properties of an FDS: the number of images …
The overlap graphs of subtrees in a tree (SOGs) generalise many other graphs classes with set representation characterisations. The complexity of recognising SOGs in open. The complexities of recognising many subclasses of SOGs are known. We consider several subclasses of SOGs by restricting the underlying tree. For a fixed integer $k \geq 3$, we consider: \begin{my_itemize} \item The overlap graphs of subtrees in a tree where that tree has $k$ leaves \item The overlap graphs of subtrees in trees that can be derived from a given input tree by subdivision and have at least 3 leaves \item The ov…
Connectivity is a central notion of graph theory and plays an important role in graph algorithm design and applications. With emerging new applications in networks, a new type of graph connectivity problem has been getting more attention--hedge connectivity. In this paper, we consider the model of hedge graphs without hedge overlaps, where edges are partitioned into subsets called hedges that fail together. The hedge connectivity of a graph is the minimum number of hedges whose removal disconnects the graph. This model is more general than the hypergraph, which brings new computational challen…
Maximally recoverable codes are codes designed for distributed storage which combine quick recovery from single node failure and optimal recovery from catastrophic failure. Gopalan et al [SODA 2017] studied the alphabet size needed for such codes in grid topologies and gave a combinatorial characterization for it. Consider a labeling of the edges of the complete bipartite graph $K_{n,n}$ with labels coming from $F_2^d$ , that satisfies the following condition: for any simple cycle, the sum of the labels over its edges is nonzero. The minimal d where this is possible controls the alphabet size …
We study graphs that are formed by independently-positioned needles (i.e., line segments) in the unit square. To mathematically characterize the graph structure, we derive the probability that two line segments intersect and determine related quantities such as the distribution of intersections, given a certain number of line segments $N$. We interpret intersections between line segments as nodes and connections between them as edges in a spatial network that we refer to as random-line graph (RLG). Using methods from the study of random-geometric graphs, we show that the probability of RLGs to…
Recently, it was proved that triangle-free intersection graphs of $n$ line segments in the plane can have chromatic number as large as $Θ(\log\log n)$. Essentially the same construction produces $Θ(\log\log n)$-chromatic triangle-free intersection graphs of a variety of other geometric shapes---those belonging to any class of compact arc-connected sets in $\mathbb{R}^2$ closed under horizontal scaling, vertical scaling, and translation, except for axis-parallel rectangles. We show that this construction is asymptotically optimal for intersection graphs of boundaries of axis-parallel rectangles…
We introduce the graph parameter readability and study it as a function of the number of vertices in a graph. Given a digraph D, an injective overlap labeling assigns a unique string to each vertex such that there is an arc from x to y if and only if x properly overlaps y. The readability of D is the minimum string length for which an injective overlap labeling exists. In applications that utilize overlap digraphs (e.g., in bioinformatics), readability reflects the length of the strings from which the overlap digraph is constructed. We study the asymptotic behaviour of readability by casting i…
We establish a list of characterizations of bounded twin-width for hereditary, totally ordered binary structures. This has several consequences. First, it allows us to show that a (hereditary) class of matrices over a finite alphabet either contains at least $n!$ matrices of size $n \times n$, or at most $c^n$ for some constant $c$. This generalizes the celebrated Stanley-Wilf conjecture/Marcus-Tardos theorem from permutation classes to any matrix class over a finite alphabet, answers our small conjecture [SODA '21] in the case of ordered graphs, and with more work, settles a question first as…
