We give an introduction to the theory of determinantal ideals and rings, their Groebner bases, initial ideals and algebras, respectively. The approach is based on the straightening law and the Knuth-Robinson-Schensted correspondence. The article contains a section treating the basic results about the passage to initial ideals and algebras.
We determine a Groebner basis for the secant ideal of the toric ideal associated to the second hypersimplex, with respect to any circular term order. The Groebner basis of the secant ideal requires polynomials of odd degree up to n. This shows that the circular term order is 2-delightful, resolving a conjecture of Drton, Sturmfels, and the author. The proof uses Groebner degenerations for secant ideals, combinatorial characterizations of the secant ideals of monomial ideals, and the relations between secant ideals and prolongations.
In this article we produce Groebner bases for the defining ideal of a monomial curve that corresponds to an almost arithmetic sequence of positive integers, correcting previous work of Sengupta,(2003).
We describe the universal Groebner basis of the ideal of maximal minors and the ideal of $2$-minors of a multigraded matrix of linear forms. Our results imply that the ideals are radical and provide bounds on the regularity. In particular, the ideals of maximal minors have linear resolutions. Our main theoretical contribution consists of introducing two new classes of ideals named after Cartwright and Sturmfels, and proving that they are closed under multigraded hyperplane sections. The gins of the ideals that we study enjoy special properties.
In this article we present two new algorithms to compute the Groebner basis of an ideal that is invariant under certain permutations of the ring variables and which are both implemented in SINGULAR (cf. [DGPS12]). The first and major algorithm is most performant over finite fields whereas the second algorithm is a probabilistic modification of the modular computation of Groebner bases based on the articles by Arnold (cf. [A03]), Idrees, Pfister, Steidel (cf. [IPS11]) and Noro, Yokoyama (cf. [NY12], [Y12]). In fact, the first algorithm that mainly uses the given symmetry, improves the necessary…
In this paper we consider Hibi rings and Rees rings attached to a poset. We classify the ideal lattices of posets whose Hibi relations are indispensable and the ideal lattices of posets whose Hibi relations form a quadratic Groebner basis with respect to the rank lexicographic order. Similar classifications are obtained for Rees rings of Hibi ideals.
The first sections contain a survey of the application of the Knuth-Robinson-Schensted corerspondence to the computation of Groebner bases of determinantal ideals. We also set up a conceptual framework for this application in terms of so-called "KRS invariants". Then we show that the initial ideal of a determinantal ideal "defined by shape" is given by its KRS image. We furthermore characterize those among these ideals that even have a Groebner basis of products of minors, and show that they can be characterized in terms of Greene's KRS invariants. Furthermore it is shown that for the ideal ge…
We present an algorithm for computing Groebner bases of vanishing ideals of points that is optimized for the case when the number of points in the associated variety is less than the number of indeterminates. The algorithm first identifies a set of essential variables, which reduces the time complexity with respect to the number of indeterminates, and then uses PLU decompositions to reduce the time complexity with respect to the number of points. This gives a theoretical upper bound for its time complexity that is an order of magnitude lower than the known one for the standard Buchberger-Moell…
Previous work by Mora and Sala provides the reduced Groebner basis of the ideal formed by the elementary symmetric polynomials in $n$ variables of degrees $k=1,\dots,n$, $\langle e_{1,n}(x), \dots, e_{n,n}(x) \rangle$. Haglund, Rhoades, and Shimonozo expand upon this, finding the reduced Groebner basis of the ideal of elementary symmetric polynomials in $n$ variables of degree $d$ for $d=n-k+1,\dots,n$ for $k\leq n$. In this paper, we further generalize their findings by using symbolic computation and experimentation to construct the reduced Groebner basis for the ideal generated by the elemen…
We outline a generalization of the Groebner fan of a homogeneous ideal with maximal cells parametrizing truncated Groebner bases. This "truncated" Groebner fan is usually much smaller than the full Groebner fan and offers the natural framework for conversion between truncated Groebner bases. The generic Groebner walk generalizes naturally to this setting by using the Buchberger algorithm with truncation on facets. We specialize to the setting of lattice ideals. Here facets along the generic walk are given by unique (facet) binomials. This along with the representation of binomials as integer v…
In this paper we introduce a new and large family of configurations whose toric ideals possess quadratic Groebner bases. As an application, a generalization of algebras of Segre-Veronese type will be studied.
We introduce the theory of monoidal Groebner bases, a concept which generalizes the familiar notion in a polynomial ring and allows for a description of Groebner bases of ideals that are stable under the action of a monoid. The main motivation for developing this theory is to prove finiteness theorems in commutative algebra and its applications. A major result of this type is that ideals in infinitely many indeterminates stable under the action of the symmetric group are finitely generated up to symmetry. We use this machinery to give new proofs of some classical finiteness theorems in algebra…
In this paper we study homological properties of the Rees ring R of the graded maximal ideal of a standard graded k-algebra A. In particular we are interested the comparison of the depth and regularity of A and R.
The paper has two goals: the study the associated graded ring of contracted homogeneous ideals in $K[x,y]$ and the study of the Groebner fan of the ideal $P$ of the rational normal curve in ${\bf P}^d$. These two problems are, quite surprisingly, very tightly related. We completely classify the contracted ideals with a Cohen-Macaulay associated graded rings in terms of the numerical invariants arising from Zariski's factorization. We determine explicitly all the initial ideals (monomial or not) of $P$ that are Cohen-Macaulay.
A contemporary and exciting application of Groebner bases is their use in computational biology, particularly in the reverse engineering of gene regulatory networks from experimental data. In this setting, the data are typically limited to tens of points, while the number of genes or variables is potentially in the thousands. As such data sets vastly underdetermine the biological network, many models may fit the same data and reverse engineering programs often require the use of methods for choosing parsimonious models. Grobner bases have recently been employed as a selection tool for polynomi…
We develop the theory of Gröbner bases for ideals in a polynomial ring with countably infinite variables over a field. As an application we reconstruct some of the one-one correspondences among various sets of partitions by using division algorithm.
Let $I\subseteq S=K[x_1,\ldots,x_n]$ be a homogeneous ideal equipped with a monomial order $<$. We show that if $\operatorname{in}_<(I)$ is a square-free monomial ideal, then $S/I$ and $S/\operatorname{in}_<(I)$ have the same connectedness dimension. We also show that graphs related to connectedness of these quotient rings have the same number of components. We also provide consequences regarding Lyubeznik numbers. We obtain these results by furthering the study of connectedness modulo a parameter in a local ring.
We construct an explicit minimal strong Groebner basis of the ideal of vanishing polynomials in the polynomial ring over Z/m for m>=2. The proof is done in a purely combinatorial way. It is a remarkable fact that the constructed Groebner basis is independent of the monomial order and that the set of leading terms of the constructed Groebner basis is unique, up to multiplication by units. We also present a fast algorithm to compute reduced normal forms, and furthermore, we give a recursive algorithm for building a Groebner basis in Z/m[x_1,x_2,...,x_n] along the prime factorization of m. The ob…
Classically, Groebner bases are computed by first prescribing a set monomial order. Moss Sweedler suggested an alternative and developed a framework to perform such computations by using valuation rings in place of monomial orders. We build on these ideas by providing a class of valuations on rational function fields of two variables that are suitable for this framework. For these valuations, we explicitly compute the image of an underlying polynomial ring and use this to perform computations concerning ideals in the polynomial ring. Interestingly, for these valuations, some ideals have a fini…
Hara, Takemura and Yoshida discuss toric ideals arising from two way subtable sum problems and shows that these toric ideals are generated by quadratic binomials if and only if the subtables are either diagonal or triangular. In the present paper, we show that if the subtables are either diagonal or triangular, then their toric ideals possess quadratic Groebner bases.
This paper presents algorithms for computing the Groebner fan of an arbitrary polynomial ideal. The computation involves enumeration of all reduced Groebner bases of the ideal. Our algorithms are based on a uniform definition of the Groebner fan that applies to both homogeneous and non-homogeneous ideals and a proof that this object is a polyhedral complex. We show that the cells of a Groebner fan can easily be oriented acyclically and with a unique sink, allowing their enumeration by the memory-less reverse search procedure. The significance of this follows from the fact that Groebner fans ar…
The Groebner fan of an ideal $I\subset k[x_1,...,x_n]$, defined by Mora and Robbiano, is a complex of polyhedral cones in $R^n$. The maximal cones of the fan are in bijection with the distinct monomial initial ideals of $I$ as the term order varies. If $I$ is homogeneous the Groebner fan is complete and is the normal fan of the state polytope of $I$. In general the Groebner fan is not complete and therefore not the normal fan of a polytope. We may ask if the restricted Groebner fan, a subdivision of $R_{>=0}^n$, is regular i.e. the normal fan of a polyhedron. The main result of this paper is a…
Let K be a field with a valuation and let S be the polynomial ring S:= K[x_1,..., x_n]. We discuss the extension of Groebner theory to ideals in S, taking the valuations of coefficients into account, and describe the Buchberger algorithm in this context. In addition we discuss some implementation and complexity issues. The main motivation comes from tropical geometry, as tropical varieties can be defined using these Groebner bases, but we also give examples showing that the resulting Groebner bases can be substantially smaller than traditional Groebner bases. In the case K = Q with the p-adic …
We study the family of ideals defined by mixed size minors of two-sided ladders of indeterminates. We compute their Groebner bases with respect to a skew-diagonal monomial order, then we use them to compute the height of the ideals. We show that these ideals correspond to a family of irreducible projective varieties, that we call mixed ladder determinantal varieties. We show that these varieties are arithmetically Cohen-Macaulay. We characterize the arithmetically Gorenstein ones, among those that satisfy a technical condition. Our main result consists in proving that mixed ladder determinanta…
The $F$-pure threshold is a numerical invariant of prime characteristic singularities, that constitutes an analogue of the log canonical thresholds in characteristic zero. We compute the $F$-pure thresholds of determinantal ideals, i.e., of ideals generated by the minors of a generic matrix.
We study initial algebras of determinantal rings, defined by minors of generic matrices, with respect to their classical generic point. This approach leads to very short proofs for the structural properties of determinantal rings. Moreover, it allows us to classify their Cohen-Macaulay and Ulrich ideals.
We show that a determinantal ideal generated by $t$-minors does not contain any nonzero polynomials with $t!/2$ or fewer terms. Geometrically this means that any nonzero polynomial vanishing on all matrices of rank at most $t-1$ has more than $t!/2$ terms.
If $I$ is a perfect ideal in a local Cohen-Macaulay ring, the generators of ideals linked to $I$ are well understood. However, the generators of the residual intersections of $I$ have only been computed in a few special cases. In this paper, we show that the $n$-residual intersections of determinantal ideals of generic $2\times n$ matrices are sums of links.
In this paper we study primality and primary decomposition of certain ideals which are generated by homogeneous degree $2$ polynomials and occur naturally from determinantal conditions. Normality is derived from these results.
Motivated by a work of Knutson, in a recent paper Conca and Varbaro have defined a new class of ideals, namely "Knutson ideals", starting from a polynomial $f$ with squarefree leading term. We will show that the main properties that this class has in polynomial rings over fields of characteristic $p$ are preserved when one introduces the definition of Knutson ideal also in polynomial rings over fields of characteristic zero. Then we will show that determinantal ideals of Hankel matrices are Knutson ideals for a suitable choice of the polynomial $f$.
The toric ideals of $3\times 3$ transportation polytopes $T$ are quadratically generated. The only exception is the Birkhoff polytope $B_3$. If $T$ is not a multiple of $B_3$, these ideals even have squarefree quadratic initial ideals. This class contains all smooth $3 \times 3$ transportation polytopes.
We consider determinantal ideals, where the generating minors are encoded in a hypergraph. We study when the generating minors form a Gröbner basis. In this case, the ideal is radical, and we can describe algebraic and numerical invariants of these ideals in terms of combinatorial data of their hypergraphs, such as the clique decomposition. In particular, we can construct a minimal free resolution as a tensor product of the minimal free resolution of their cliques. For several classes of hypergraphs we find a combinatorial description of the minimal primes in terms of a prime splitting. That i…
Hilbert schemes of zero-dimensional ideals in a polynomial ring can be covered with suitable affine open subschemes whose construction is achieved using border bases. Moreover, border bases have proved to be an excellent tool for describing zero-dimensional ideals when the coefficients are inexact. And in this situation they show a clear advantage with respect to Groebner bases which, nevertheless, can also be used in the study of Hilbert schemes, since they provide tools for constructing suitable stratifications. In this paper we compare Groebner basis schemes with border basis schemes. It is…
We provide new results on the vanishing of local cohomology modules supported at ideals of minors of matrices over arbitrary commutative Noetherian rings. In the process, we compute the local cohomology of rings of polynomials with integer coefficients---supported at generic determinantal ideals---and also obtain results on F-modules and D-modules that are likely to be of independent interest.
Given any equigenerated monomial ideal $I$ with the property that the defining ideal $J$ of the fiber cone $ F(I)$ of $I$ is generated by quadratic binomials, we introduce a matrix such that the set of its binomial $2$-minors is a generating set of $J$. In this way, we characterize the fiber cone of sortable and Freiman ideals.
In this paper, we survey the theory of Cartwright-Sturmfels ideals. These are Z^n-graded ideals, whose multigraded generic initial ideal is radical. Cartwright-Sturmfels ideals have surprising properties, mostly stemming from the fact that their Hilbert scheme only contains one Borel-fixed point. This has consequences, e.g., on their universal Groebner bases and on the family of their initial ideals. In this paper, we discuss several known classes of Cartwright-Sturmfels ideals and we find a new one. Among determinantal ideals of same-size minors of a matrix of variables and Schubert determina…
We show that the ideal generated by maximal minors (i.e., $(k+1)$-minors) of a $(k+1) \times n$ Vandermonde matrix is radical and Cohen-Macaulay. Note that this ideal is generated by all Specht polynomials with shape $(n-k,1,...,1)$.
In this paper, we give a sufficient condition for a set $\mathal G$ of polynomials to be a Gröbner basis with respect to a given term-order for the ideal $I$ that it generates. Our criterion depends on the linkage pattern of the ideal $I$ and of the ideal generated by the initial terms of the elements of $\mathcal G$. We then apply this criterion to ideals generated by minors and pfaffians. More precisely, we consider large families of ideals generated by minors or pfaffians in a matrix or a ladder, where the size of the minors or pfaffians is allowed to vary in different regions of the matrix…
In 1992, V. Weispfenning proved the existence of Comprehensive Groebner Bases (CGB) and gave an algorithm to compute one. That algorithm was not very efficient and not canonical. Using his suggestions, A. Montes obtained in 2002 a more efficient algorithm (DISPGB) for Discussing Parametric Groebner Bases. Inspired in its philosophy, V. Weispfenning defined, in 2002, how to obtain a Canonical Comprehensive Groebner Basis (CCGB) for parametric polynomial ideals, and provided a constructive method. In this paper we use Weispfenning's CCGB ideas to make substantial improvements on Montes DISPGB al…
In this paper, we study the family of determinantal ideals of "close" cuts of Hankel matrices, say $ \mathcal{f} $. We show that the multi-Rees algebra of ideals in $ \mathcal{f} $ is defined by a quadratic Gröbner basis, it is Koszul, normal Cohen-Macaulay domain and it has a nice Sagbi basis. As a consequence of Koszulness, we prove that every product $ I_1\ldots I_l $ of ideals of $ \mathcal{f} $ has linear resolution. Moreover, we show that natural generators of every product $ I_1\ldots I_l $ form a Gröbner basis.
We determine the defining equations of the Rees algebra and of the special fiber ring of the ideal of maximal minors of a $2\times n$ sparse matrix. We prove that their initial algebras are ladder determinantal rings. This allows us to show that the Rees algebra and the special fiber ring are Cohen-Macaulay domains, they are Koszul, they have rational singularities in characteristic zero and are F-rational in positive characteristic.
We produce a family of complexes called trimming complexes and explore applications. We study how trimming complexes can be used to deduce the Betti table for the minimal free resolution of the ideal generated by subsets of a generating set for an arbitrary ideal $I$. In particular, we compute the Betti table for removing an arbitrary generator from the ideal of submaximal pfaffians of a generic skew symmetric matrix $M$. We also explicitly compute the Betti table for the ideal generated by certain subsets of the generating set of the ideal of maximal minors of a generic $n \times m$ matrix. S…
In this paper we describe the method which we applied to successfully compute the primary decomposition of a certain ideal coming from applications in combinatorial algebra and algebraic statistics regarding conditional independence statements with hidden variables. While our method is based on the algorithm for primary decomposition by Gianni, Trager and Zacharias, we were not able to decompose the ideal using the standard form of that algorithm, nor by any other method known to us.
Let I be either the ideal of maximal minors or the ideal of 2-minors of a row graded or column graded matrix of linear forms L. In two previous papers we showed that I is a Cartwright-Sturmfels ideal, that is, the multigraded generic initial ideal gin(I) of I is radical (and essentially independent of the term order chosen). In this paper we describe generators and prime decomposition of gin(I) in terms of data related to the linear dependences among the row or columns of the submatrices of L. In the case of 2-minors we also give a closed formula for its multigraded Hilbert series.
A determinantal facet ideal (DFI) is an ideal $J_Δ$ generated by maximal minors of a generic matrix parametrized by an associated simplicial complex $Δ$. In this paper, we construct an explicit linear strand for the initial ideal with respect to any diagonal term order $<$ of an arbitrary DFI. In particular, we show that if $Δ$ has no \emph{1-nonfaces}, then the Betti numbers of the linear strand of $J_Δ$ and its initial ideal coincide. We apply this result to prove a conjecture of Ene, Herzog, and Hibi on Betti numbers of closed binomial edge ideals in the case that the associated graph has a…
In the first part of this article, we consider a Groebner basis of the differential ideal {x_1^2} with respect to "the" weighted lexicographical monomial order and show that its computation is related with an identity involving the partitions that appear in the first Rogers-Ramanujan identity. We then prove that a Grobener basis of this ideal is not differentially finite in contrary with the case of "the" weighted reverse lexicographical order. In the second part, we give a simple and direct proof of a theorem of Nguyen Duc Tam about the Groaner basis of the differential ideal {x_1y_1}; we the…
Let I be a homogeneous ideal of a polynomial ring S. We prove that if the initial ideal J of I, w.r.t. a term order on S, is square-free, then the extremal Betti numbers of S/I and of S/J coincide. In particular, depth(S/I)=depth(S/J) and reg(S/I)=reg(S/J).
We consider ideals of minors of a matrix, ideals of minors of a symmetric matrix, and ideals of Pfaffians of an alternating matrix. Assuming these ideals are of generic height, we characterize the condition $G_{s}$ for these ideals in terms of the heights of other ideals of minors or Pfaffians of the same matrix. We additionally obtain bounds on the generation and concentration degrees of the Rees rings of a subclass of such ideals via specialization of the Rees rings in the generic case. We do this by proving, given sufficient height conditions on ideals of minors or Pfaffians of the matrix, …
We introduce the notion of monomial group action and study some of its consequences for Groebner basis theory. As an application we prove a conjecture of V. Batyrev and O. Popov describing the Cox rings of Del Pezzo surfaces (of degree at least 3) as quotients of a polynomial ring by an ideal generated by quadrics.
Let $R$ be a Noetherian local ring and $m$ a positive integer. Let $I$ be the ideal of $R$ generated by the maximal minors of an $m \times (m + 1)$ matrix $M$ with entries in $R$. Assuming that the grade of the ideal generated by the $k$-minors of $M$ is at least $m - k + 2$ for $1 \leq \forall k \leq m$, we will study the associated primes of $I^n$ for $\forall n > 0$. Moreover, we compute the saturation of $I^n$ for $1 \leq \forall n \leq m$ in the case where $R$ is a Cohen-Macaulay ring and the entries of $M$ are powers of elements that form an sop for $R$.
The aim of this note is to discuss the following quite queer Problem: \noindent GIVEN \noindent i) the free non-commutative polynomial ring, ${\Cal P} := {\Bbb F}\langle X_1,\ldots,X_n\rangle$ {\em (public)}, \noindent ii) a bilateral ideal ${\sf I}\subset {\Bbb F}\langle X_1,\ldots,X_n\rangle$ {\em (private)}, \noindent iii) a finite set $G := \{g_1,\ldots,g_l\}\subset{\sf I}$ of elements of the ideal ${\sf I}$ {\em (public)}, \noindent a noetherian semigroup term-ordering $\prec,$ {\rm (private)}, on the word semigroup ${\Cal T} := < X_1,\ldots,X_n>$, \noindent COMPUTE \noindent --a finite s…