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arXiv 2402.17165cs.CV

面向形态无关细胞实例分割的少样本自适应

Few-shot adaptation for morphology-independent cell instance segmentation

West Virginia University(西弗吉尼亚大学)

Ram J. Zaveri, Voke Brume, Gianfranco Doretto

AI总结:

本文提出一种少样本域自适应方法,仅需标注新数据中1到5个细胞即可快速调整分割模型,在形态多变且困难的细菌数据集上显著提升细胞实例分割准确率。

摘要:

显微数据集的规模正在变得更大且产生更加频繁。要从中受益,需要像细胞实例分割这样准确且精确的定量分析工具。由于数据存在变异性,这具有挑战性,需要重新训练分割模型以在新数据集上保持高准确率。对于分割具有细长和非凸形态的细胞(如细菌)而言,这一点尤其必要。我们提出通过引入一种少样本域自适应方法来减少重新训练模型所需的标注量和计算能力,该方法只需标注新数据中的一到五个细胞即可进行处理,并能快速自适应模型以保持高准确率。我们的结果表明,在自适应到极具挑战性的细菌数据集后,准确率得到了显著提升。

英文摘要:

Microscopy data collections are becoming larger and more frequent. Accurate and precise quantitative analysis tools like cell instance segmentation are necessary to benefit from them. This is challenging due to the variability in the data, which requires retraining the segmentation model to maintain high accuracy on new collections. This is needed especially for segmenting cells with elongated and non-convex morphology like bacteria. We propose to reduce the amount of annotation and computing power needed for retraining the model by introducing a few-shot domain adaptation approach that requires annotating only one to five cells of the new data to process and that quickly adapts the model to maintain high accuracy. Our results show a significant boost in accuracy after adaptation to very challenging bacteria datasets.

机构、总结、中文摘要均由AI分析而来,可能存在错误,请以论文正文为准。

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