Deep learning models for graphs, especially Graph Convolutional Networks (GCNs), have achieved remarkable performance in the task of semi-supervised node classification. However, recent studies show that GCNs suffer from adversarial perturbations. Such vulnerability to adversarial attacks significantly decreases the stability of GCNs when being applied to security-critical applications. Defense methods such as preprocessing, attention mechanism and adversarial training have been discussed by various studies. While being able to achieve desirable performance when the perturbation rates are low, such methods are still vulnerable to high perturbation rates. Meanwhile, some defending algorithms perform poorly when the node features are not visible. Therefore, in this paper, we propose a novel mechanism called influence mechanism, which is able to enhance the robustness of the GCNs significantly. The influence mechanism divides the effect of each node into two parts: introverted influence which tries to maintain its own features and extroverted influence which exerts influences on other nodes. Utilizing the influence mechanism, we propose the Influence GCN (I-GCN) model. Extensive experiments show that our proposed model is able to achieve higher accuracy rates than state-of-the-art methods when defending against non-targeted attacks.
Peking University(北京大学);Beijing Institute of Big Data Research (BIBDR)(北京大数据研究院)
The effectiveness of Graph Convolutional Networks (GCNs) has been demonstrated in a wide range of graph-based machine learning tasks. However, the update of parameters in GCNs is only from labeled nodes, lacking the utilization of unlabeled data. In this paper, we apply Virtual Adversarial Training (VAT), an adversarial regularization method based on both labeled and unlabeled data, on the supervised loss of GCN to enhance its generalization performance. By imposing virtually adversarial smoothness on the posterior distribution in semi-supervised learning, VAT yields improvement on the Symmetr…
Accurate real-time traffic forecasting is a core technological problem against the implementation of the intelligent transportation system. However, it remains challenging considering the complex spatial and temporal dependencies among traffic flows. In the spatial dimension, due to the connectivity of the road network, the traffic flows between linked roads are closely related. In terms of the temporal factor, although there exists a tendency among adjacent time points in general, the importance of distant past points is not necessarily smaller than that of recent past points since traffic fl…
Rutgers University - New Brunswick(罗格斯大学-新不伦瑞克分校);Department of Computer Science(计算机科学系)
Applying Global Self-attention (GSA) mechanism over features has achieved remarkable success on Convolutional Neural Networks (CNNs). However, it is not clear if Graph Convolutional Networks (GCNs) can similarly benefit from such a technique. In this paper, inspired by the similarity between CNNs and GCNs, we study the impact of the Global Self-attention mechanism on GCNs. We find that consistent with the intuition, the GSA mechanism allows GCNs to capture feature-based vertex relations regardless of edge connections; As a result, the GSA mechanism can introduce extra expressive power to the G…
Self-supervision as an emerging technique has been employed to train convolutional neural networks (CNNs) for more transferrable, generalizable, and robust representation learning of images. Its introduction to graph convolutional networks (GCNs) operating on graph data is however rarely explored. In this study, we report the first systematic exploration and assessment of incorporating self-supervision into GCNs. We first elaborate three mechanisms to incorporate self-supervision into GCNs, analyze the limitations of pretraining & finetuning and self-training, and proceed to focus on multi-tas…
Beijing University of Posts and Telecommunications(北京邮电大学);Tsinghua University(清华大学);Simon Fraser University(西蒙菲莎大学)
Graph Convolutional Networks (GCNs) have gained great popularity in tackling various analytics tasks on graph and network data. However, some recent studies raise concerns about whether GCNs can optimally integrate node features and topological structures in a complex graph with rich information. In this paper, we first present an experimental investigation. Surprisingly, our experimental results clearly show that the capability of the state-of-the-art GCNs in fusing node features and topological structures is distant from optimal or even satisfactory. The weakness may severely hinder the capa…
Guangdong University of Finance & Economics(广东财经大学)
Graph convolutional networks (GCNs) have achieved remarkable learning ability for dealing with various graph structural data recently. In general, deep GCNs do not work well since graph convolution in conventional GCNs is a special form of Laplacian smoothing, which makes the representation of different nodes indistinguishable. In the literature, multi-scale information was employed in GCNs to enhance the expressive power of GCNs. However, over-smoothing phenomenon as a crucial issue of GCNs remains to be solved and investigated. In this paper, we propose two novel multi-scale GCN frameworks b…
Nanjing University of Science and Technology(南京理工大学)
Graph convolutional networks (GCNs) have shown the powerful ability in text structure representation and effectively facilitate the task of text classification. However, challenges still exist in adapting GCN on learning discriminative features from texts due to the main issue of graph variants incurred by the textual complexity and diversity. In this paper, we propose a dual-attention GCN to model the structural information of various texts as well as tackle the graph-invariant problem through embedding two types of attention mechanisms, i.e. the connection-attention and hop-attention, into t…
Molecular structure-property relationships are key to molecular engineering for materials and drug discovery. The rise of deep learning offers a new viable solution to elucidate the structure-property relationships directly from chemical data. Here we show that the performance of graph convolutional networks (GCNs) for the prediction of molecular properties can be improved by incorporating attention and gate mechanisms. The attention mechanism enables a GCN to identify atoms in different environments. The gated skip-connection further improves the GCN by updating feature maps at an appropriate…
The University of Sydney(悉尼大学);The University of Western Australia(西澳大学)
Recognizing the layout of unstructured digital documents is crucial when parsing the documents into the structured, machine-readable format for downstream applications. Recent studies in Document Layout Analysis usually rely on computer vision models to understand documents while ignoring other information, such as context information or relation of document components, which are vital to capture. Our Doc-GCN presents an effective way to harmonize and integrate heterogeneous aspects for Document Layout Analysis. We first construct graphs to explicitly describe four main aspects, including synt…
Aspect-level sentiment classification aims to identify the sentiment polarity towards a specific aspect term in a sentence. Most current approaches mainly consider the semantic information by utilizing attention mechanisms to capture the interactions between the context and the aspect term. In this paper, we propose to employ graph convolutional networks (GCNs) on the dependency tree to learn syntax-aware representations of aspect terms. GCNs often show the best performance with two layers, and deeper GCNs do not bring additional gain due to over-smoothing problem. However, in some cases, impo…
TrafficKAN-GCN: Graph Convolutional-based Kolmogorov-Arnold Network for Traffic Flow Optimization
School of Mathematics and Applied Mathematics, University of Nottingham Ningbo China(诺丁汉大学宁波校区数学与应用数学学院);School of Computer Science, University of Nottingham Ningbo China(诺丁汉大学宁波校区计算机科学学院);Department of Electrical and Computer Engineering, University of Washington(华盛顿大学电气与计算机工程系);School of Computer Science, Carnegie Mellon University(卡内基梅隆大学计算机科学学院);School of Engineering, University of Nottingham Ningbo China(诺丁汉大学宁波校区工程学院);School of Computer Science, University College Dublin(都柏林大学学院计算机科学学院);The ADAPT SFI Research Centre(ADAPT SFI研究中心)
University of Pennsylvania(宾夕法尼亚大学);University of California, Berkeley(加州大学伯克利分校);Delft University of Technology(代尔夫特理工大学)
Graph convolutional neural networks (GCNNs) learn compositional representations from network data by nesting linear graph convolutions into nonlinearities. In this work, we approach GCNNs from a state-space perspective revealing that the graph convolutional module is a minimalistic linear state-space model, in which the state update matrix is the graph shift operator. We show that this state update may be problematic because it is nonparametric, and depending on the graph spectrum it may explode or vanish. Therefore, the GCNN has to trade its degrees of freedom between extracting features from…
The Chinese University of Hong Kong(香港中文大学);Hong Kong University of Science and Technology(香港科技大学);Tencent(腾讯)
We propose a new STAcked and Reconstructed Graph Convolutional Networks (STAR-GCN) architecture to learn node representations for boosting the performance in recommender systems, especially in the cold start scenario. STAR-GCN employs a stack of GCN encoder-decoders combined with intermediate supervision to improve the final prediction performance. Unlike the graph convolutional matrix completion model with one-hot encoding node inputs, our STAR-GCN learns low-dimensional user and item latent factors as the input to restrain the model space complexity. Moreover, our STAR-GCN can produce node e…
Huawei(华为);École Polytechnique(巴黎综合理工学院);Institute Polytechnique de Paris(巴黎理工学院);AUEB(雅典经济与商业大学)
The robustness of the much-used Graph Convolutional Networks (GCNs) to perturbations of their input is becoming a topic of increasing importance. In this paper, the random GCN is introduced for which a random matrix theory analysis is possible. This analysis suggests that if the graph is sufficiently perturbed, or in the extreme case random, then the GCN fails to benefit from the node features. It is furthermore observed that enhancing the message passing step in GCNs by adding the node feature kernel to the adjacency matrix of the graph structure solves this problem. An empirical study of a G…
Graph convolutional networks(GCNs) have become the most popular approaches for graph data in these days because of their powerful ability to extract features from graph. GCNs approaches are divided into two categories, spectral-based and spatial-based. As the earliest convolutional networks for graph data, spectral-based GCNs have achieved impressive results in many graph related analytics tasks. However, spectral-based models cannot directly work on directed graphs. In this paper, we propose an improved spectral-based GCN for the directed graph by leveraging redefined Laplacians to improve it…
Renmin University of China(中国人民大学);Fudan University(复旦大学);Alibaba Group(阿里巴巴集团)
Graph convolutional networks (GCNs) are a powerful deep learning approach for graph-structured data. Recently, GCNs and subsequent variants have shown superior performance in various application areas on real-world datasets. Despite their success, most of the current GCN models are shallow, due to the {\em over-smoothing} problem. In this paper, we study the problem of designing and analyzing deep graph convolutional networks. We propose the GCNII, an extension of the vanilla GCN model with two simple yet effective techniques: {\em Initial residual} and {\em Identity mapping}. We provide theor…
The Hong Kong Polytechnic University(香港理工大学);ETH Zurich(苏黎世联邦理工学院)
Many interesting problems in machine learning are being revisited with new deep learning tools. For graph-based semisupervised learning, a recent important development is graph convolutional networks (GCNs), which nicely integrate local vertex features and graph topology in the convolutional layers. Although the GCN model compares favorably with other state-of-the-art methods, its mechanisms are not clear and it still requires a considerable amount of labeled data for validation and model selection. In this paper, we develop deeper insights into the GCN model and address its fundamental limits…
Central South University(中南大学);Georgia Institute of Technology(佐治亚理工学院);Peking University(北京大学);Zhejiang University(浙江大学)
Accurate and real-time traffic forecasting plays an important role in the Intelligent Traffic System and is of great significance for urban traffic planning, traffic management, and traffic control. However, traffic forecasting has always been considered an open scientific issue, owing to the constraints of urban road network topological structure and the law of dynamic change with time, namely, spatial dependence and temporal dependence. To capture the spatial and temporal dependence simultaneously, we propose a novel neural network-based traffic forecasting method, the temporal graph convolu…
Yuanpei College, Peking University(北京大学元培学院);Key Laboratory of Machine Perception, Ministry of Education, Peking University(北京大学教育部机器感知重点实验室)
Graph Convolutional Networks (GCNs) have proved to be a most powerful architecture in aggregating local neighborhood information for individual graph nodes. Low-rank proximities and node features are successfully leveraged in existing GCNs, however, attributes that graph links may carry are commonly ignored, as almost all of these models simplify graph links into binary or scalar values describing node connectedness. In our paper instead, links are reverted to hypostatic relationships between entities with descriptional attributes. We propose GCN-LASE (GCN with Link Attributes and Sampling Est…
Graph convolution networks (GCN) are increasingly popular in many applications, yet remain notoriously hard to train over large graph datasets. They need to compute node representations recursively from their neighbors. Current GCN training algorithms suffer from either high computational costs that grow exponentially with the number of layers, or high memory usage for loading the entire graph and node embeddings. In this paper, we propose a novel efficient layer-wise training framework for GCN (L-GCN), that disentangles feature aggregation and feature transformation during training, hence gre…
In colored graphs, node classes are often associated with either their neighbors class or with information not incorporated in the graph associated with each node. We here propose that node classes are also associated with topological features of the nodes. We use this association to improve Graph machine learning in general and specifically, Graph Convolutional Networks (GCN). First, we show that even in the absence of any external information on nodes, a good accuracy can be obtained on the prediction of the node class using either topological features, or using the neighbors class as an inp…
In recent years, substantial progress has been made on Graph Convolutional Networks (GCNs). However, the computing of GCN usually requires a large memory space for keeping the entire graph. In consequence, GCN is not flexible enough, especially for large scale graphs in complex real-world applications. Fortunately, methods based on Matrix Factorization (MF) naturally support constructing mini-batches, and thus are more friendly to distributed computing compared with GCN. Accordingly, in this paper, we analyze the connections between GCN and MF, and simplify GCN as matrix factorization with uni…
Mila – Quebec AI Institute(米拉-魁北克人工智能研究所);Université de Montréal(蒙特利尔大学)
Graph convolutional networks (GCNs) have shown promising results in processing graph data by extracting structure-aware features. This gave rise to extensive work in geometric deep learning, focusing on designing network architectures that ensure neuron activations conform to regularity patterns within the input graph. However, in most cases the graph structure is only accounted for by considering the similarity of activations between adjacent nodes, which limits the capabilities of such methods to discriminate between nodes in a graph. Here, we propose to augment conventional GCNs with geomet…
National University of Singapore(新加坡国立大学);University of Science and Technology of China(中国科学技术大学);Nanyang Technological University(南洋理工大学)
Graph Convolutional Network (GCN) is an emerging technique that performs learning and reasoning on graph data. It operates feature learning on the graph structure, through aggregating the features of the neighbor nodes to obtain the embedding of each target node. Owing to the strong representation power, recent research shows that GCN achieves state-of-the-art performance on several tasks such as recommendation and linked document classification. Despite its effectiveness, we argue that existing designs of GCN forgo modeling cross features, making GCN less effective for tasks or data where cro…
Recently, a considerable literature has grown up around the theme of Graph Convolutional Network (GCN). How to effectively leverage the rich structural information in complex graphs, such as knowledge graphs with heterogeneous types of entities and relations, is a primary open challenge in the field. Most GCN methods are either restricted to graphs with a homogeneous type of edges (e.g., citation links only), or focusing on representation learning for nodes only instead of jointly propagating and updating the embeddings of both nodes and edges for target-driven objectives. This paper addresses…
Sberbank(俄罗斯联邦储蓄银行);Skolkovo Institute of Science and Technology(斯科尔科沃科学技术研究院)
In this paper, we discuss how modern deep learning approaches can be applied to the credit scoring of bank clients. We show that information about connections between clients based on money transfers between them allows us to significantly improve the quality of credit scoring compared to the approaches using information about the target client solely. As a final solution, we develop a new graph neural network model EWS-GCN that combines ideas of graph convolutional and recurrent neural networks via attention mechanism. The resulting model allows for robust training and efficient processing of…
The network embedding problem that maps nodes in a graph to vectors in Euclidean space can be very useful for addressing several important tasks on a graph. Recently, graph neural networks (GNNs) have been proposed for solving such a problem. However, most embedding algorithms and GNNs are difficult to interpret and do not scale well to handle millions of nodes. In this paper, we tackle the problem from a new perspective based on the equivalence of three constrained optimization problems: the network embedding problem, the trace maximization problem of the modularity matrix in a sampled graph,…
With the rapid expansion of mobile phone networks in developing countries, large-scale graph machine learning has gained sudden relevance in the study of global poverty. Recent applications range from humanitarian response and poverty estimation to urban planning and epidemic containment. Yet the vast majority of computational tools and algorithms used in these applications do not account for the multi-view nature of social networks: people are related in myriad ways, but most graph learning models treat relations as binary. In this paper, we develop a graph-based convolutional network for lea…
The Pennsylvania State University(宾夕法尼亚州立大学);Michigan State University(密歇根州立大学);IBM T.J. Watson(IBM T.J. Watson 研究院)
Graph Convolutional Networks (GCNs) show promising results for semi-supervised learning tasks on graphs, thus become favorable comparing with other approaches. Despite the remarkable success of GCNs, it is difficult to train GCNs with insufficient supervision. When labeled data are limited, the performance of GCNs becomes unsatisfying for low-degree nodes. While some prior work analyze successes and failures of GCNs on the entire model level, profiling GCNs on individual node level is still underexplored. In this paper, we analyze GCNs in regard to the node degree distribution. From empirical …
The application of machine learning techniques in the setting of road networks holds the potential to facilitate many important intelligent transportation applications. Graph Convolutional Networks (GCNs) are neural networks that are capable of leveraging the structure of a network. However, many implicit assumptions of GCNs do not apply to road networks. We introduce the Relational Fusion Network (RFN), a novel type of GCN designed specifically for road networks. In particular, we propose methods that outperform state-of-the-art GCNs by 21%-40% on two machine learning tasks in road networks. …
Elliptic;The University of Sheffield(谢菲尔德大学);Telecom SudParis(南巴黎电信学院);Polytechnic Institute of Paris(巴黎综合理工学院)
We show that a modification of the first layer of a Graph Convolutional Network (GCN) can be used to effectively propagate label information across neighbor nodes, for binary and multi-class classification problems. This is done by selectively eliminating self-loops for the label features during the training phase of a GCN. The GCN architecture is otherwise unchanged, without any extra hyper-parameters, and can be used in both a transductive and inductive setting. We show through several experiments that, depending on how many labels are available during the inference phase, this strategy can …
Univ. of Minnesota(明尼苏达大学);Digital Tech. Center(数字技术中心)
Graph convolutional networks (GCNs) are vulnerable to perturbations of the graph structure that are either random, or, adversarially designed. The perturbed links modify the graph neighborhoods, which critically affects the performance of GCNs in semi-supervised learning (SSL) tasks. Aiming at robustifying GCNs conditioned on the perturbed graph, the present paper generates multiple auxiliary graphs, each having its binary 0-1 edge weights flip values with probabilities designed to enhance robustness. The resultant edge-dithered auxiliary graphs are leveraged by an adaptive (A)GCN that perform…
Graph Convolutional Networks (GCNs) have shown very powerful for graph data representation and learning tasks. Existing GCNs usually conduct feature aggregation on a fixed neighborhood graph in which each node computes its representation by aggregating the feature representations of all its neighbors which is biased by its own representation. However, this fixed aggregation strategy is not guaranteed to be optimal for GCN based graph learning and also can be affected by some graph structure noises, such as incorrect or undesired edge connections. To address these issues, we propose a novel Gra…
Huazhong University of Science and Technology(华中科技大学)
The decoupled Graph Convolutional Network (GCN), a recent development of GCN that decouples the neighborhood aggregation and feature transformation in each convolutional layer, has shown promising performance for graph representation learning. Existing decoupled GCNs first utilize a simple neural network (e.g., MLP) to learn the hidden features of the nodes, then propagate the learned features on the graph with fixed steps to aggregate the information of multi-hop neighborhoods. Despite effectiveness, the aggregation operation, which requires the whole adjacency matrix as the input, is involve…
Label Propagation (LPA) and Graph Convolutional Neural Networks (GCN) are both message passing algorithms on graphs. Both solve the task of node classification but LPA propagates node label information across the edges of the graph, while GCN propagates and transforms node feature information. However, while conceptually similar, theoretical relation between LPA and GCN has not yet been investigated. Here we study the relationship between LPA and GCN in terms of two aspects: (1) feature/label smoothing where we analyze how the feature/label of one node is spread over its neighbors; And, (2) fe…
Jagiellonian University(雅盖隆大学);University of Cambridge(剑桥大学)
Graph Convolutional Networks (GCNs) have recently become the primary choice for learning from graph-structured data, superseding hash fingerprints in representing chemical compounds. However, GCNs lack the ability to take into account the ordering of node neighbors, even when there is a geometric interpretation of the graph vertices that provides an order based on their spatial positions. To remedy this issue, we propose Spatial Graph Convolutional Network (SGCN) which uses spatial features to efficiently learn from graphs that can be naturally located in space. Our contribution is threefold: …
This paper aims at studying the sample complexity of graph convolutional networks (GCNs), by providing tight upper bounds of Rademacher complexity for GCN models with a single hidden layer. Under regularity conditions, theses derived complexity bounds explicitly depend on the largest eigenvalue of graph convolution filter and the degree distribution of the graph. Again, we provide a lower bound of Rademacher complexity for GCNs to show optimality of our derived upper bounds. Taking two commonly used examples as representatives, we discuss the implications of our results in designing graph conv…
$G$-equivariant convolutional neural networks (GCNNs) is a geometric deep learning model for data defined on a homogeneous $G$-space $\mathcal{M}$. GCNNs are designed to respect the global symmetry in $\mathcal{M}$, thereby facilitating learning. In this paper, we analyze GCNNs on homogeneous spaces $\mathcal{M} = G/K$ in the case of unimodular Lie groups $G$ and compact subgroups $K \leq G$. We demonstrate that homogeneous vector bundles is the natural setting for GCNNs. We also use reproducing kernel Hilbert spaces to obtain a precise criterion for expressing $G$-equivariant layers as convol…
University of Illinois at Urbana-Champaign(伊利诺伊大学厄巴纳-香槟分校);Facebook AI(脸书人工智能);University of Rochester(罗切斯特大学)
Graph Convolutional Network (GCN) plays pivotal roles in many real-world applications. Despite the successes of GCN deployment, GCN often exhibits performance disparity with respect to node degrees, resulting in worse predictive accuracy for low-degree nodes. We formulate the problem of mitigating the degree-related performance disparity in GCN from the perspective of the Rawlsian difference principle, which is originated from the theory of distributive justice. Mathematically, we aim to balance the utility between low-degree nodes and high-degree nodes while minimizing the task-specific loss.…
Southern Methodist University(南卫理公会大学);Lawrence Berkeley National Laboratory(劳伦斯伯克利国家实验室);University of Texas at Dallas(德克萨斯大学达拉斯分校);NASA Jet Propulsion Laboratory(美国国家航空航天局喷气推进实验室)
There recently has been a surge of interest in developing a new class of deep learning (DL) architectures that integrate an explicit time dimension as a fundamental building block of learning and representation mechanisms. In turn, many recent results show that topological descriptors of the observed data, encoding information on the shape of the dataset in a topological space at different scales, that is, persistent homology of the data, may contain important complementary information, improving both performance and robustness of DL. As convergence of these two emerging ideas, we propose to e…
University of Illinois at Urbana-Champaign(伊利诺伊大学厄巴纳-香槟分校)
Graph Convolutional Network (GCN) has exhibited strong empirical performance in many real-world applications. The vast majority of existing works on GCN primarily focus on the accuracy while ignoring how confident or uncertain a GCN is with respect to its predictions. Despite being a cornerstone of trustworthy graph mining, uncertainty quantification on GCN has not been well studied and the scarce existing efforts either fail to provide deterministic quantification or have to change the training procedure of GCN by introducing additional parameters or architectures. In this paper, we propose t…
Graph Convolutional Networks (GCNs) have attracted more and more attentions in recent years. A typical GCN layer consists of a linear feature propagation step and a nonlinear transformation step. Recent works show that a linear GCN can achieve comparable performance to the original non-linear GCN while being much more computationally efficient. In this paper, we dissect the feature propagation steps of linear GCNs from a perspective of continuous graph diffusion, and analyze why linear GCNs fail to benefit from more propagation steps. Following that, we propose Decoupled Graph Convolution (DGC…
Wuhan University(武汉大学);Shanghai Jiao Tong University(上海交通大学);University of New South Wales(新南威尔士大学);Harbin Institute of Technology(哈尔滨工业大学);Mohamed bin Zayed University of AI(穆罕默德·本·扎耶德人工智能大学)
The research for characterizing GNN expressiveness attracts much attention as graph neural networks achieve a champion in the last five years. The number of linear regions has been considered a good measure for the expressivity of neural networks with piecewise linear activation. In this paper, we present some estimates for the number of linear regions of the classic graph convolutional networks (GCNs) with one layer and multiple-layer scenarios. In particular, we obtain an optimal upper bound for the maximum number of linear regions for one-layer GCNs, and the upper and lower bounds for multi…
National Taiwan University(国立台湾大学);University of California, Los Angeles(加州大学洛杉矶分校);Google Research(谷歌研究院)
Graph convolutional network (GCN) has been successfully applied to many graph-based applications; however, training a large-scale GCN remains challenging. Current SGD-based algorithms suffer from either a high computational cost that exponentially grows with number of GCN layers, or a large space requirement for keeping the entire graph and the embedding of each node in memory. In this paper, we propose Cluster-GCN, a novel GCN algorithm that is suitable for SGD-based training by exploiting the graph clustering structure. Cluster-GCN works as the following: at each step, it samples a block of …
Graph neural networks (GNNs) have gained traction over the past few years for their superior performance in numerous machine learning tasks. Graph Convolutional Neural Networks (GCN) are a common variant of GNNs that are known to have high performance in semi-supervised node classification (SSNC), and work well under the assumption of homophily. Recent literature has highlighted that GCNs can achieve strong performance on heterophilous graphs under certain "special conditions". These arguments motivate us to understand why, and how, GCNs learn to perform SSNC. We find a positive correlation be…
Predicting DNA-protein binding is an important and classic problem in bioinformatics. Convolutional neural networks have outperformed conventional methods in modeling the sequence specificity of DNA-protein binding. However, none of the studies has utilized graph convolutional networks for motif inference. In this work, we propose to use graph convolutional networks for motif inference. We build a sequence k-mer graph for the whole dataset based on k-mer co-occurrence and k-mer sequence relationship and then learn DNA Graph Convolutional Network (DNA-GCN) for the whole dataset. Our DNA-GCN is …
Purdue University(普渡大学);Beijing University of Technology(北京工业大学);Georgia Institute of Technology(佐治亚理工学院)
This study proposes a novel Graph Convolutional Neural Network with Data-driven Graph Filter (GCNN-DDGF) model that can learn hidden heterogeneous pairwise correlations between stations to predict station-level hourly demand in a large-scale bike-sharing network. Two architectures of the GCNN-DDGF model are explored; GCNNreg-DDGF is a regular GCNN-DDGF model which contains the convolution and feedforward blocks, and GCNNrec-DDGF additionally contains a recurrent block from the Long Short-term Memory neural network architecture to capture temporal dependencies in the bike-sharing demand series.…
Graph convolutional networks (GCNs) have gained popularity due to high performance achievable on several downstream tasks including node classification. Several architectural variants of these networks have been proposed and investigated with experimental studies in the literature. Motivated by a recent work on simplifying GCNs, we study the problem of designing other variants and propose a framework to compose networks using building blocks of GCN. The framework offers flexibility to compose and evaluate different networks using feature and/or label propagation networks, linear or non-linear …
Harbin Institute of Technology(哈尔滨工业大学);Peng Cheng Laboratory(鹏城实验室)
Recently, some Neural Architecture Search (NAS) techniques are proposed for the automatic design of Graph Convolutional Network (GCN) architectures. They bring great convenience to the use of GCN, but could hardly apply to the Federated Learning (FL) scenarios with distributed and private datasets, which limit their applications. Moreover, they need to train many candidate GCN models from scratch, which is inefficient for FL. To address these challenges, we propose FL-AGCNS, an efficient GCN NAS algorithm suitable for FL scenarios. FL-AGCNS designs a federated evolutionary optimization strateg…
Beijing National Research Center for Information Science and Technology (BNRist)(北京信息科学与技术国家研究中心);Tsinghua University(清华大学);Tencent AI Lab(腾讯人工智能实验室)
Increasing the depth of GCN, which is expected to permit more expressivity, is shown to incur performance detriment especially on node classification. The main cause of this lies in over-smoothing. The over-smoothing issue drives the output of GCN towards a space that contains limited distinguished information among nodes, leading to poor expressivity. Several works on refining the architecture of deep GCN have been proposed, but it is still unknown in theory whether or not these refinements are able to relieve over-smoothing. In this paper, we first theoretically analyze how general GCNs act …
College of Intelligence and Computing, Tianjin University(天津大学智能与计算学部);School of Cyberspace, Hangzhou Dianzi University(杭州电子科技大学网络空间安全学院)
Graph Convolutional Network (GCN) has shown remarkable potential of exploring graph representation. However, the GCN aggregating mechanism fails to generalize to networks with heterophily where most nodes have neighbors from different classes, which commonly exists in real-world networks. In order to make the propagation and aggregation mechanism of GCN suitable for both homophily and heterophily (or even their mixture), we introduce block modeling into the framework of GCN so that it can realize "block-guided classified aggregation", and automatically learn the corresponding aggregation rules…
Indian Institute of Science(印度科学研究所);Conduent Labs(康维恩实验室)
Semi-supervised learning on graph structured data has received significant attention with the recent introduction of Graph Convolution Networks (GCN). While traditional methods have focused on optimizing a loss augmented with Laplacian regularization framework, GCNs perform an implicit Laplacian type regularization to capture local graph structure. In this work, we propose Lovasz Convolutional Network (LCNs) which are capable of incorporating global graph properties. LCNs achieve this by utilizing Lovasz's orthonormal embeddings of the nodes. We analyse local and global properties of graphs an…
Graph convolutional networks (GCNs) have been employed as a kind of significant tool on many graph-based applications recently. Inspired by convolutional neural networks (CNNs), GCNs generate the embeddings of nodes by aggregating the information of their neighbors layer by layer. However, the high computational and memory cost of GCNs due to the recursive neighborhood expansion across GCN layers makes it infeasible for training on large graphs. To tackle this issue, several sampling methods during the process of information aggregation have been proposed to train GCNs in a mini-batch Stochast…
Important advances have been made using convolutional neural network (CNN) approaches to solve complicated problems in areas that rely on grid structured data such as image processing and object classification. Recently, research on graph convolutional neural networks (GCNN) has increased dramatically as researchers try to replicate the success of CNN for graph structured data. Unfortunately, traditional CNN methods are not readily transferable to GCNN, given the irregularity and geometric complexity of graphs. The emerging field of GCNN is further complicated by research papers that differ gr…