Globally Optimal Segmentation of Mutually Interacting Surfaces using Deep Learning
University of Iowa（爱荷华大学）；Beijing Institute of Ophthalmology（北京眼科研究所）；Beijing Tongren Hospital（北京同仁医院）；Capital University of Medical Science（首都医科大学）；Eye Hospital of China Academy of Chinese Medical Sciences（中国中医科学院眼科医院）；University of Notre Dame（圣母大学）；Heidelberg University（海德堡大学）
Hui Xie, Zhe Pan, Leixin Zhou, Fahim A Zaman, Danny Chen, Jost B Jonas, Yaxing Wang, Xiaodong Wu
备注：
11 pages main content and reference, plus 10 pages appendix, total 21 pages
Segmentation of multiple surfaces in medical images is a challenging problem, further complicated by the frequent presence of weak boundary and mutual influence between adjacent objects. The traditional graph-based optimal surface segmentation method has proven its effectiveness with its ability of capturing various surface priors in a uniform graph model. However, its efficacy heavily relies on handcrafted features that are used to define the surface cost for the "goodness" of a surface. Recently, deep learning (DL) is emerging as powerful tools for medical image segmentation thanks to its superior feature learning capability. Unfortunately, due to the scarcity of training data in medical imaging, it is nontrivial for DL networks to implicitly learn the global structure of the target surfaces, including surface interactions. In this work, we propose to parameterize the surface cost functions in the graph model and leverage DL to learn those parameters. The multiple optimal surfaces are then simultaneously detected by minimizing the total surface cost while explicitly enforcing the mutual surface interaction constraints. The optimization problem is solved by the primal-dual Internal Point Method, which can be implemented by a layer of neural networks, enabling efficient end-to-end training of the whole network. Experiments on Spectral Domain Optical Coherence Tomography (SD-OCT) retinal layer segmentation and Intravascular Ultrasound (IVUS) vessel wall segmentation demonstrated very promising results. All source code is public to facilitate further research at this direction.
The Chinese University of Hong Kong (Shenzhen)（香港中文大学（深圳））；Shenzhen Research Institute of Big Data（深圳大数据研究院）；University of Science and Technology of China（中国科学技术大学）
Diabetic retinopathy is the most important complication of diabetes. Early diagnosis of retinal lesions helps to avoid visual loss or blindness. Due to high-resolution and small-size lesion regions, applying existing methods, such as U-Nets, to perform segmentation on fundus photography is very challenging. Although downsampling the input images could simplify the problem, it loses detailed information. Conducting patch-level analysis helps reaching fine-scale segmentation yet usually leads to misunderstanding as the lack of context information. In this paper, we propose an efficient network t…
Deepwise AI Lab（深睿人工智能实验室）；The University of Hong Kong（香港大学）；Sun Yat-sen University（中山大学）
Recently 3D volumetric organ segmentation attracts much research interest in medical image analysis due to its significance in computer aided diagnosis. This paper aims to address the pancreas segmentation task in 3D computed tomography volumes. We propose a novel end-to-end network, Globally Guided Progressive Fusion Network, as an effective and efficient solution to volumetric segmentation, which involves both global features and complicated 3D geometric information. A progressive fusion network is devised to extract 3D information from a moderate number of neighboring slices and predict a p…
University of Beira Interior（贝拉内格罗大学）；University of Missouri-Columbia（密苏里大学哥伦比亚分校）
Multiphase active contour based models are useful in identifying multiple regions with different characteristics such as the mean values of regions. This is relevant in brain magnetic resonance images (MRIs), allowing the differentiation of white matter against gray matter. We consider a well defined globally convex formulation of Vese and Chan multiphase active contour model for segmenting brain MRI images. A well-established theory and an efficient dual minimization scheme are thoroughly described which guarantees optimal solutions and provides stable segmentations. Moreover, under the dual …
Automated surface segmentation is important and challenging in many medical image analysis applications. Recent deep learning based methods have been developed for various object segmentation tasks. Most of them are a classification based approach, e.g. U-net, which predicts the probability of being target object or background for each voxel. One problem of those methods is lacking of topology guarantee for segmented objects, and usually post processing is needed to infer the boundary surface of the object. In this paper, a novel model based on convolutional neural network (CNN) followed by a …
Segmentation is essential for medical image analysis to identify and localize diseases, monitor morphological changes, and extract discriminative features for further diagnosis. Skin cancer is one of the most common types of cancer globally, and its early diagnosis is pivotal for the complete elimination of malignant tumors from the body. This research develops an Artificial Intelligence (AI) framework for supervised skin lesion segmentation employing the deep learning approach. The proposed framework, called MFSNet (Multi-Focus Segmentation Network), uses differently scaled feature maps for c…
Macquarie University（麦考瑞大学）；University of Technology Sydney（悉尼科技大学）；The University of Sydney（悉尼大学）
Automatic tumor segmentation is a crucial step in medical image analysis for computer-aided diagnosis. Although the existing methods based on convolutional neural networks (CNNs) have achieved the state-of-the-art performance, many challenges still remain in medical tumor segmentation. This is because regular CNNs can only exploit translation invariance, ignoring further inherent symmetries existing in medical images such as rotations and reflections. To mitigate this shortcoming, we propose a novel group equivariant segmentation framework by encoding those inherent symmetries for learning mor…
Iowa Institute for Biomedical Imaging（爱荷华生物医学影像研究所）；The University of Iowa（爱荷华大学）
State-of-the-art automated segmentation algorithms are not 100\% accurate especially when segmenting difficult to interpret datasets like those with severe osteoarthritis (OA). We present a novel interactive method called just-enough interaction (JEI), which adds a fast correction step to the automated layered optimal graph segmentation of multiple objects and surfaces (LOGISMOS). After LOGISMOS segmentation in knee MRI, the JEI user interaction does not modify boundary surfaces of the bones and cartilages directly. Local costs of underlying graph nodes are modified instead and the graph is re…
Joint Medical Image Enhancement and Segmentation with Diffusion-based Symbiotic Information Interaction
Shenzhen Research Institute, The Chinese University of Hong Kong（香港中文大学深圳研究院）；University of Science and Technology of China（中国科学技术大学）；Imperial Global Singapore, Imperial College London（伦敦帝国学院新加坡分校）
Technische Universität München（慕尼黑工业大学）；Konica Minolta Laboratory Europe（柯尼卡美能达欧洲实验室）；Johns Hopkins University（约翰斯·霍普金斯大学）；Trinity College Dublin（都柏林圣三一学院）
Registration of partial-view 3D US volumes with MRI data is influenced by initialization. The standard of practice is using extrinsic or intrinsic landmarks, which can be very tedious to obtain. To overcome the limitations of registration initialization, we present a novel approach that is based on Euclidean distance maps derived from easily obtainable coarse segmentations. We evaluate our approach quantitatively on the publicly available RESECT dataset and show that it is robust regarding overlap of target area and initial position. Furthermore, our method provides initializations that are su…
Guangdong Cardiovascular Institute（广东省心血管病研究所）；Guangdong Provincial People’s Hospital（广东省人民医院）；Guangdong Academy of Medical Sciences（广东省医学科学院）；University of Notre Dame（圣母大学）
Coronary artery disease (CAD) is the most common cause of death globally, and its diagnosis is usually based on manual myocardial segmentation of Magnetic Resonance Imaging (MRI) sequences. As the manual segmentation is tedious, time-consuming and with low applicability, automatic myocardial segmentation using machine learning techniques has been widely explored recently. However, almost all the existing methods treat the input MRI sequences independently, which fails to capture the temporal information between sequences, e.g., the shape and location information of the myocardium in sequences …
German Center for Neurodegenerative Diseases (DZNE)（德国神经退行性疾病中心（DZNE））；A.A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital（马萨诸塞州总医院A.A.马丁诺斯生物医学成像中心）；Harvard Medical School（哈佛医学院）
Leading neuroimaging studies have pushed 3T MRI acquisition resolutions below 1.0 mm for improved structure definition and morphometry. Yet, only few, time-intensive automated image analysis pipelines have been validated for high-resolution (HiRes) settings. Efficient deep learning approaches, on the other hand, rarely support more than one fixed resolution (usually 1.0 mm). Furthermore, the lack of a standard submillimeter resolution as well as limited availability of diverse HiRes data with sufficient coverage of scanner, age, diseases, or genetic variance poses additional, unsolved challeng…
Brain Tumor Segmentation in MRI Images with 3D U-Net and Contextual Transformer
University of Information Technology（信息科技大学）；Vietnam National University（越南国家大学）；College of Technology and Design, University of Economics Ho Chi Minh City（胡志明市经济大学技术与设计学院）；Ho Chi Minh City Open University（胡志明市开放大学）
Deep vessel segmentation with joint multi-prior encoding
LaTIM UMR 1101；Inserm（法国国家健康与医学研究院）；University of Western Brittany（西布列塔尼大学）；University Hospital of Brest（布雷斯特大学医院）；CONICET（阿根廷国家科学技术研究委员会）；ICube UMR 7357；CNRS（法国国家科学研究中心）；IMT Atlantique（大西洋电信学院）
PC-Seg: Progressive Cross-View Consistency for 3D OCT Segmentation from Sparse 2D Annotations
Graduate School of Information Sciences, Tohoku University（东北大学信息科学研究生院）；Department of Ophthalmology, Graduate School of Medicine, Tohoku University（东北大学医学研究生院眼科系）；Institute of Ophthalmology, University College London（伦敦大学学院眼科研究所）；NIHR Biomedical Research Centre at Moorfields Eye Hospital NHS Foundation Trust（摩尔菲尔德眼科医院NHS基金会信托基金NIHR生物医学研究中心）；UCL Hawkes Institute, University College London（伦敦大学学院UCL霍克斯研究所）；Department of Computer Science, University College London（伦敦大学学院计算机科学系）
University of Science and Technology of China（中国科学技术大学）；Institute of Artificial Intelligence, Hefei Comprehensive National Science Center（合肥综合性国家科学中心人工智能研究院）
Dynamic Vision Sensor (DVS) can asynchronously output the events reflecting apparent motion of objects with microsecond resolution, and shows great application potential in monitoring and other fields. However, the output event stream of existing DVS inevitably contains background activity noise (BA noise) due to dark current and junction leakage current, which will affect the temporal correlation of objects, resulting in deteriorated motion estimation performance. Particularly, the existing filter-based denoising methods cannot be directly applied to suppress the noise in event stream, since …
In this paper, we present the PS^2-Net -- a locally and globally aware deep learning framework for semantic segmentation on 3D scene-level point clouds. In order to deeply incorporate local structures and global context to support 3D scene segmentation, our network is built on four repeatedly stacked encoders, where each encoder has two basic components: EdgeConv that captures local structures and NetVLAD that models global context. Different from existing start-of-the-art methods for point-based scene semantic segmentation that either violate or do not achieve permutation invariance, our PS^2…
Rutgers University（罗格斯大学）；Institute for Hand & Arm Surgery（手与手臂外科研究所）；Rutgers-New Jersey Medical School（罗格斯大学新泽西医学院）；Sichuan University West China Hospital（四川大学华西医院）；Sichuan University（四川大学）
For diagnosis of shoulder illness, it is essential to look at the morphology deviation of scapula and humerus from the medical images that are acquired from Magnetic Resonance (MR) imaging. However, taking high-resolution MR images is time-consuming and costly because the reduction of the physical distance between image slices causes prolonged scanning time. Moreover, due to the lack of training images, images from various sources must be utilized, which creates the issue of high variance across the dataset. Also, there are human errors among the images due to the fact that it is hard to take …
IMT Atlantique（大西洋国立高等矿业电信学院）；LaTIM UMR 1101, Inserm（法国国家健康与医学研究院LaTIM UMR 1101实验室）；Symbiosis International University（共生国际大学）；Centre Hospitalier Régional et Universitaire (CHRU) de Brest（布雷斯特大学区域中心医院）
Morphological and diagnostic evaluation of pediatric musculoskeletal system is crucial in clinical practice. However, most segmentation models do not perform well on scarce pediatric imaging data. We propose a new pre-trained regularized convolutional encoder-decoder network for the challenging task of segmenting heterogeneous pediatric magnetic resonance (MR) images. To this end, we have conceived a novel optimization scheme for the segmentation network which comprises additional regularization terms to the loss function. In order to obtain globally consistent predictions, we incorporate a sh…
A functional for joint variational object segmentation and shape matching is developed. The formulation is based on optimal transport w.r.t. geometric distance and local feature similarity. Geometric invariance and modelling of object-typical statistical variations is achieved by introducing degrees of freedom that describe transformations and deformations of the shape template. The shape model is mathematically equivalent to contour-based approaches but inference can be performed without conversion between the contour and region representations, allowing combination with other convex segmenta…
As the COVID-19 pandemic aggravated the excessive workload of doctors globally, the demand for computer aided methods in medical imaging analysis increased even further. Such tools can result in more robust diagnostic pipelines which are less prone to human errors. In our paper, we present a deep neural network to which we refer to as Attention BCDU-Net, and apply it to the task of lung and heart segmentation from chest X-ray (CXR) images, a basic but ardous step in the diagnostic pipeline, for instance for the detection of cardiomegaly. We show that the fine-tuned model exceeds previous state…
Dalio Institute of Cardiovascular Imaging, Weill Cornell Medical College（威尔康奈尔医学院达利奥心血管影像研究所）
Recently, a successful pose estimation algorithm, called Cascade Pose Regression (CPR), was proposed in the literature. Trained over Pose Index Feature, CPR is a regressor ensemble that is similar to Boosting. In this paper we show how CPR can be represented as a Neural Network. Specifically, we adopt a Graph Transformer Network (GTN) representation and accordingly train CPR with Back Propagation (BP) that permits globally tuning. In contrast, previous CPR literature only took a layer wise training without any post fine tuning. We empirically show that global training with BP outperforms layer…
ReportMedSAM: Guiding Segmentation Through Radiology Reports
School of Engineering, College of Engineering and Physical Sciences, University of Birmingham（工程学院，工程与物理科学学院，伯明翰大学）；Department of Cancer and Genomic Sciences, College of Medicine and Health, University of Birmingham（癌症与基因组科学系，医学与健康学院，伯明翰大学）；Department of Computer Science, Faculty of Science and Engineering, University of Manchester（计算机科学系，科学与工程学院，曼彻斯特大学）；The Division of Informatics, Imaging and Data Science, Faculty of Biology, Medicine, and Health, University of Manchester（信息学、成像与数据科学部，生物、医学与健康学院，曼彻斯特大学）
Maximum Matching Accuracy: An Instance Segmentation Evaluation Metric Utilizing Globally Optimal Matching
College of Computing, Georgia Institute of Technology（佐治亚理工学院计算机学院）；School of Materials Science and Engineering, Georgia Institute of Technology（佐治亚理工学院材料科学与工程学院）；Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology（佐治亚理工学院生物医学工程系）；George W. Woodruff School of Mechanical Engineering, Georgia Institute of Technology（佐治亚理工学院机械工程学院）
We propose a novel approach to localize a 3D object from the intensity and depth information images provided by a Time-of-Flight (ToF) sensor. Our method uses two CNNs. The first one uses raw depth and intensity images as input, to segment the floor pixels, from which the extrinsic parameters of the camera are estimated. The second CNN is in charge of segmenting the object-of-interest. As a main innovation, it exploits the calibration estimated from the prediction of the first CNN to represent the geometric depth information in a coordinate system that is attached to the ground, and is thus in…
The concept of affordance is important to understand the relevance of object parts for a certain functional interaction. Affordance types generalize across object categories and are not mutually exclusive. This makes the segmentation of affordance regions of objects in images a difficult task. In this work, we build on an iterative approach that learns a convolutional neural network for affordance segmentation from sparse keypoints. During this process, the predictions of the network need to be binarized. In this work, we propose an adaptive approach for binarization and estimate the parameter…
Faculty of Electrical Engineering and Computing（电气工程与计算学院）；University of Zagreb（萨格勒布大学）
Training semantic segmentation models on multiple datasets has sparked a lot of recent interest in the computer vision community. This interest has been motivated by expensive annotations and a desire to achieve proficiency across multiple visual domains. However, established datasets have mutually incompatible labels which disrupt principled inference in the wild. We address this issue by automatic construction of universal taxonomies through iterative dataset integration. Our method detects subset-superset relationships between dataset-specific labels, and supports learning of sub-class logi…
Optimal surface segmentation is a state-of-the-art method used for segmentation of multiple globally optimal surfaces in volumetric datasets. The method is widely used in numerous medical image segmentation applications. However, nodes in the graph based optimal surface segmentation method typically encode uniformly distributed orthogonal voxels of the volume. Thus the segmentation cannot attain an accuracy greater than a single unit voxel, i.e. the distance between two adjoining nodes in graph space. Segmentation accuracy higher than a unit voxel is achievable by exploiting partial volume inf…
In this paper, we propose a new approach for building cellular automata to solve real-world segmentation problems. We design and train a cellular automaton that can successfully segment high-resolution images. We consider a colony that densely inhabits the pixel grid, and all cells are governed by a randomized update that uses the current state, the color, and the state of the $3\times 3$ neighborhood. The space of possible rules is defined by a small neural network. The update rule is applied repeatedly in parallel to a large random subset of cells and after convergence is used to produce seg…
Northwestern University（西北大学）；Tongji University（同济大学）；Microsoft Research Asia（微软亚洲研究院）；Microsoft Research（微软研究院）
In this work, we present a novel and effective framework to facilitate object detection with the instance-level segmentation information that is only supervised by bounding box annotation. Starting from the joint object detection and instance segmentation network, we propose to recursively estimate the pseudo ground-truth object masks from the instance-level object segmentation network training, and then enhance the detection network with top-down segmentation feedbacks. The pseudo ground truth mask and network parameters are optimized alternatively to mutually benefit each other. To obtain th…
Semantic image segmentation is a fundamental task in image understanding. Per-pixel semantic labelling of an image benefits greatly from the ability to consider region consistency both locally and globally. However, many Fully Convolutional Network based methods do not impose such consistency, which may give rise to noisy and implausible predictions. We address this issue by proposing a dense multi-label network module that is able to encourage the region consistency at different levels. This simple but effective module can be easily integrated into any semantic segmentation systems. With comp…
Deep convolutional neural networks (DCNNs) have contributed many breakthroughs in segmentation tasks, especially in the field of medical imaging. However, \textit{domain shift} and \textit{corrupted annotations}, which are two common problems in medical imaging, dramatically degrade the performance of DCNNs in practice. In this paper, we propose a novel robust cross-denoising framework using two peer networks to address domain shift and corrupted label problems with a peer-review strategy. Specifically, each network performs as a mentor, mutually supervised to learn from reliable samples selec…
University of Leeds（利兹大学）；Leeds Institute for Cardiovascular and Metabolic Medicine（利兹心血管与代谢医学研究所）；KU Leuven（荷语鲁汶大学）；Alan Turing Institute（艾伦·图灵研究所）
Medical image registration is a challenging task involving the estimation of spatial transformations to establish anatomical correspondence between pairs or groups of images. Recently, deep learning-based image registration methods have been widely explored, and demonstrated to enable fast and accurate image registration in a variety of applications. However, most deep learning-based registration methods assume that the deformation fields are smooth and continuous everywhere in the image domain, which is not always true, especially when registering images whose fields of view contain discontin…
Despite the popularity and empirical success of patch-based nearest-neighbor and weighted majority voting approaches to medical image segmentation, there has been no theoretical development on when, why, and how well these nonparametric methods work. We bridge this gap by providing a theoretical performance guarantee for nearest-neighbor and weighted majority voting segmentation under a new probabilistic model for patch-based image segmentation. Our analysis relies on a new local property for how similar nearby patches are, and fuses existing lines of work on modeling natural imagery patches a…
Multicuts enable to conveniently represent discrete graphical models for unsupervised and supervised image segmentation, in the case of local energy functions that exhibit symmetries. The basic Potts model and natural extensions thereof to higher-order models provide a prominent class of such objectives, that cover a broad range of segmentation problems relevant to image analysis and computer vision. We exhibit a way to systematically take into account such higher-order terms for computational inference. Furthermore, we present results of a comprehensive and competitive numerical evaluation of…
Tianjin University（天津大学）；Xi’an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences（中国科学院西安光学精密机械研究所）
Joint object detection and semantic segmentation can be applied to many fields, such as self-driving cars and unmanned surface vessels. An initial and important progress towards this goal has been achieved by simply sharing the deep convolutional features for the two tasks. However, this simple scheme is unable to make full use of the fact that detection and segmentation are mutually beneficial. To overcome this drawback, we propose a framework called TripleNet where triple supervisions including detection-oriented supervision, class-aware segmentation supervision, and class-agnostic segmentat…
RWTH Technical University Aachen（亚琛工业大学）；Max Planck Institute for Intelligent Systems（马克斯·普朗克智能系统研究所）
Recent deep learning models achieve impressive results on 3D scene analysis tasks by operating directly on unstructured point clouds. A lot of progress was made in the field of object classification and semantic segmentation. However, the task of instance segmentation is less explored. In this work, we present 3D-BEVIS, a deep learning framework for 3D semantic instance segmentation on point clouds. Following the idea of previous proposal-free instance segmentation approaches, our model learns a feature embedding and groups the obtained feature space into semantic instances. Current point-base…
Department of Neuro-Oncology, Massachusetts General Hospital（麻省总医院神经肿瘤科）；MGH & BWH Center for Clinical Data Science（麻省总医院与布莱根妇女医院临床数据科学中心）；Department of Radiology, Massachusetts General Hospital（麻省总医院放射科）；Massachusetts General Hospital（麻省总医院）；NVIDIA（英伟达）
Deep learning has quickly become the weapon of choice for brain lesion segmentation. However, few existing algorithms pre-configure any biological context of their chosen segmentation tissues, and instead rely on the neural network's optimizer to develop such associations de novo. We present a novel method for applying deep neural networks to the problem of glioma tissue segmentation that takes into account the structured nature of gliomas - edematous tissue surrounding mutually-exclusive regions of enhancing and non-enhancing tumor. We trained multiple deep neural networks with a 3D U-Net arc…
University of California, Los Angeles（加州大学洛杉矶分校）；Adobe Research（奥多比研究院）
Segmenting semantic objects from images and parsing them into their respective semantic parts are fundamental steps towards detailed object understanding in computer vision. In this paper, we propose a joint solution that tackles semantic object and part segmentation simultaneously, in which higher object-level context is provided to guide part segmentation, and more detailed part-level localization is utilized to refine object segmentation. Specifically, we first introduce the concept of semantic compositional parts (SCP) in which similar semantic parts are grouped and shared among different …
We propose three segmentation methods using GAN and information leakage between generator and discriminator. First, we propose an Adversarial Training Attention Module (ATA-Module) that uses an attention mechanism from the discriminator to the generator to enhance and leak important information in the discriminator. ATA-Module transmits important information to the generator from the discriminator. Second, we propose a Top-Down Pixel-wise Difficulty Attention Module (Top-Down PDA-Module) that leaks an attention map based on pixel-wise difficulty in the generator to the discriminator. The gener…
This paper investigates one of the most fundamental computer vision problems: image segmentation. We propose a supervised hierarchical approach to object-independent image segmentation. Starting with over-segmenting superpixels, we use a tree structure to represent the hierarchy of region merging, by which we reduce the problem of segmenting image regions to finding a set of label assignment to tree nodes. We formulate the tree structure as a constrained conditional model to associate region merging with likelihoods predicted using an ensemble boundary classifier. Final segmentations can then …
Tencent Youtu Lab（腾讯优图实验室）；Shenzhen International Graduate School, Tsinghua University（清华大学深圳国际研究生院）
Few-shot semantic segmentation aims to learn to segment unseen class objects with the guidance of only a few support images. Most previous methods rely on the pixel-level label of support images. In this paper, we focus on a more challenging setting, in which only the image-level labels are available. We propose a general framework to firstly generate coarse masks with the help of the powerful vision-language model CLIP, and then iteratively and mutually refine the mask predictions of support and query images. Extensive experiments on PASCAL-5i and COCO-20i datasets demonstrate that our method…
Pohang University of Science and Technology（浦项科技大学）
Semantic segmentation networks adopt transfer learning from image classification networks which occurs a shortage of spatial context information. For this reason, we propose Spatial Context Memoization (SpaM), a bypassing branch for spatial context by retaining the input dimension and constantly communicating its spatial context and rich semantic information mutually with the backbone network. Multi-scale context information for semantic segmentation is crucial for dealing with diverse sizes and shapes of target objects in the given scene. Conventional multi-scale context scheme adopts multipl…
Graphs offer a natural way to formulate Multiple Object Tracking (MOT) and Multiple Object Tracking and Segmentation (MOTS) within the tracking-by-detection paradigm. However, they also introduce a major challenge for learning methods, as defining a model that can operate on such structured domain is not trivial. In this work, we exploit the classical network flow formulation of MOT to define a fully differentiable framework based on Message Passing Networks (MPNs). By operating directly on the graph domain, our method can reason globally over an entire set of detections and exploit contextual…
Semantic image segmentation is a principal problem in computer vision, where the aim is to correctly classify each individual pixel of an image into a semantic label. Its widespread use in many areas, including medical imaging and autonomous driving, has fostered extensive research in recent years. Empirical improvements in tackling this task have primarily been motivated by successful exploitation of Convolutional Neural Networks (CNNs) pre-trained for image classification and object recognition. However, the pixel-wise labelling with CNNs has its own unique challenges: (1) an accurate deconv…
Direct Cardiac Segmentation from Undersampled K-space Using Transformers
School of Computation, Information and Technology, Technical University Munich（计算、信息与技术学院，技术大学慕尼黑）；Klinikum Rechts der Isar, Technical University Munich（技术大学慕尼黑医院）；Munich Center for Machine Learning, Technical University Munich（慕尼黑机器学习中心，技术大学慕尼黑）；Department of Computing, Imperial College London（计算系，帝国理工学院伦敦）
Co-Seg++: Mutual Prompt-Guided Collaborative Learning for Versatile Medical Segmentation
School of Computer Science, University of Nottingham Ningbo China（诺丁汉大学宁波校区计算机科学学院）；University of Nottingham, UK（诺丁汉大学（英国））；Graduate School of Information, Production and Systems, Waseda University, Japan（早稻田大学信息、生产与系统研究生院）；Yale University（耶鲁大学）
In a world of pervasive cameras, public spaces are often captured from multiple perspectives by cameras of different types, both fixed and mobile. An important problem is to organize these heterogeneous collections of videos by finding connections between them, such as identifying correspondences between the people appearing in the videos and the people holding or wearing the cameras. In this paper, we wish to solve two specific problems: (1) given two or more synchronized third-person videos of a scene, produce a pixel-level segmentation of each visible person and identify corresponding peopl…
Image-level weakly supervised semantic segmentation (WSSS) is a fundamental yet challenging computer vision task facilitating scene understanding and automatic driving. Most existing methods resort to classification-based Class Activation Maps (CAMs) to play as the initial pseudo labels, which tend to focus on the discriminative image regions and lack customized characteristics for the segmentation task. To alleviate this issue, we propose a novel activation modulation and recalibration (AMR) scheme, which leverages a spotlight branch and a compensation branch to obtain weighted CAMs that can …
National Institutes of Health Clinical Center（美国国立卫生研究院临床中心）
This paper reports Deep LOGISMOS approach to 3D tumor segmentation by incorporating boundary information derived from deep contextual learning to LOGISMOS - layered optimal graph image segmentation of multiple objects and surfaces. Accurate and reliable tumor segmentation is essential to tumor growth analysis and treatment selection. A fully convolutional network (FCN), UNet, is first trained using three adjacent 2D patches centered at the tumor, providing contextual UNet segmentation and probability map for each 2D patch. The UNet segmentation is then refined by Gaussian Mixture Model (GMM) a…
