Medical image registration is a challenging task involving the estimation of spatial transformations to establish anatomical correspondence between pairs or groups of images. Recently, deep learning-based image registration methods have been widely explored, and demonstrated to enable fast and accurate image registration in a variety of applications. However, most deep learning-based registration methods assume that the deformation fields are smooth and continuous everywhere in the image domain, which is not always true, especially when registering images whose fields of view contain discontinuities at tissue/organ boundaries. In such scenarios, enforcing smooth, globally continuous deformation fields leads to incorrect/implausible registration results. We propose a novel discontinuity-preserving image registration method to tackle this challenge, which ensures globally discontinuous and locally smooth deformation fields, leading to more accurate and realistic registration results. The proposed method leverages the complementary nature of image segmentation and registration and enables joint segmentation and pair-wise registration of images. A co-attention block is proposed in the segmentation component of the network to learn the structural correlations in the input images, while a discontinuity-preserving registration strategy is employed in the registration component of the network to ensure plausibility in the estimated deformation fields at tissue/organ interfaces. We evaluate our method on the task of intra-subject spatio-temporal image registration using large-scale cinematic cardiac magnetic resonance image sequences, and demonstrate that our method achieves significant improvements over the state-of-the-art for medical image registration, and produces high-quality segmentation masks for the regions of interest.
Rochester Institute of Technology(罗切斯特理工学院);National Institute of Allergy and Infectious Diseases(国家过敏和传染病研究所);MSC LLC.(MSC有限责任公司)
Cardiac image segmentation is a critical process for generating personalized models of the heart and for quantifying cardiac performance parameters. Several convolutional neural network (CNN) architectures have been proposed to segment the heart chambers from cardiac cine MR images. Here we propose a multi-task learning (MTL)-based regularization framework for cardiac MR image segmentation. The network is trained to perform the main task of semantic segmentation, along with a simultaneous, auxiliary task of pixel-wise distance map regression. The proposed distance map regularizer is a decoder …
In this work, we implement a fully convolutional segmenter featuring both a learned group structure and a regularized weight-pruner to reduce the high computational cost in volumetric image segmentation. We validated our framework on the ACDC dataset featuring one healthy and four pathology groups imaged throughout the cardiac cycle. Our technique achieved Dice scores of 96.8% (LV blood-pool), 93.3% (RV blood-pool) and 90.0% (LV Myocardium) with five-fold cross-validation and yielded similar clinical parameters as those estimated from the ground truth segmentation data. Based on these results,…
Rutgers University(罗格斯大学);SenseBrain Research(SenseBrain研究院);University of Arkansas for Medical Sciences(阿肯色大学医学院);Lund University(隆德大学);New York University(纽约大学)
Joint 2D cardiac segmentation and 3D volume reconstruction are fundamental to building statistical cardiac anatomy models and understanding functional mechanisms from motion patterns. However, due to the low through-plane resolution of cine MR and high inter-subject variance, accurately segmenting cardiac images and reconstructing the 3D volume are challenging. In this study, we propose an end-to-end latent-space-based framework, DeepRecon, that generates multiple clinically essential outcomes, including accurate image segmentation, synthetic high-resolution 3D image, and 3D reconstructed volu…
Magnetic Resonance Imaging (MRI) has evolved as a clinical standard-of-care imaging modality for cardiac morphology, function assessment, and guidance of cardiac interventions. All these applications rely on accurate extraction of the myocardial tissue and blood pool from the imaging data. Here we propose a framework for left ventricle (LV) segmentation from cardiac cine-MRI. First, we segment the LV blood pool using iterative graph cuts, and subsequently use this information to segment the myocardium. We formulate the segmentation procedure as an energy minimization problem in a graph subject…
Image Sciences Institute, University Medical Center Utrecht(乌得勒支大学医学中心影像科学研究所);Department of Radiology, University Medical Center Utrecht(乌得勒支大学医学中心放射科)
Segmentation of the heart in cardiac cine MR is clinically used to quantify cardiac function. We propose a fully automatic method for segmentation and disease classification using cardiac cine MR images. A convolutional neural network (CNN) was designed to simultaneously segment the left ventricle (LV), right ventricle (RV) and myocardium in end-diastole (ED) and end-systole (ES) images. Features derived from the obtained segmentations were used in a Random Forest classifier to label patients as suffering from dilated cardiomyopathy, hypertrophic cardiomyopathy, heart failure following myocard…
Fudan University(复旦大学);Leiden University Medical Center(莱顿大学医学中心)
Quantitative assessment of left ventricle (LV) function from cine MRI has significant diagnostic and prognostic value for cardiovascular disease patients. The temporal movement of LV provides essential information on the contracting/relaxing pattern of heart, which is keenly evaluated by clinical experts in clinical practice. Inspired by the expert way of viewing Cine MRI, we propose a new CNN module that is able to incorporate the temporal information into LV segmentation from cine MRI. In the proposed CNN, the optical flow (OF) between neighboring frames is integrated and aggregated at featu…
King's College London(伦敦国王学院);Eindhoven University of Technology(埃因霍温理工大学)
Cine cardiac magnetic resonance (CMR) has become the gold standard for the non-invasive evaluation of cardiac function. In particular, it allows the accurate quantification of functional parameters including the chamber volumes and ejection fraction. Deep learning has shown the potential to automate the requisite cardiac structure segmentation. However, the lack of robustness of deep learning models has hindered their widespread clinical adoption. Due to differences in the data characteristics, neural networks trained on data from a specific scanner are not guaranteed to generalise well to dat…
National Library of Medicine, National Institutes of Health(美国国立卫生研究院国家医学图书馆);Rochester Institute of Technology(罗切斯特理工学院);TAJ Technologies Inc.(TAJ科技公司)
Segmentation of the left ventricle and quantification of various cardiac contractile functions is crucial for the timely diagnosis and treatment of cardiovascular diseases. Traditionally, the two tasks have been tackled independently. Here we propose a convolutional neural network based multi-task learning approach to perform both tasks simultaneously, such that, the network learns better representation of the data with improved generalization performance. Probabilistic formulation of the problem enables learning the task uncertainties during the training, which are used to automatically compu…
University of Kansas(堪萨斯大学);Rochester Institute of Technology(罗切斯特理工学院)
Patient-specific left ventricle (LV) myocardial models have the potential to be used in a variety of clinical scenarios for improved diagnosis and treatment plans. Cine cardiac magnetic resonance (MR) imaging provides high resolution images to reconstruct patient-specific geometric models of the LV myocardium. With the advent of deep learning, accurate segmentation of cardiac chambers from cine cardiac MR images and unsupervised learning for image registration for cardiac motion estimation on a large number of image datasets is attainable. Here, we propose a deep leaning-based framework for th…
United Imaging Intelligence(联影智能);UIH America, Inc.(联影美国公司);United Imaging Healthcare(联影医疗)
Retrospectively gated cine (retro-cine) MRI is the clinical standard for cardiac functional analysis. Deep learning (DL) based methods have been proposed for the reconstruction of highly undersampled MRI data and show superior image quality and magnitude faster reconstruction time than CS-based methods. Nevertheless, it remains unclear whether DL reconstruction is suitable for cardiac function analysis. To address this question, in this study we evaluate and compare the cardiac functional values (EDV, ESV and EF for LV and RV, respectively) obtained from highly accelerated MRI acquisition usin…
Chain of Flow: ECG-Conditioned 4D Cardiac Cine Generation from Patient-Specific Anatomical Anchor
School of Engineering, College of Engineering and Physical Sciences, University of Birmingham(英国伯明翰大学工程学院);William Harvey Research Institute, NIHR Barts Biomedical Research Centre, Queen Mary University London(伦敦Queen Mary大学威廉·哈里维研究所);Barts Heart Centre, St Bartholomew’s Hospital, Barts Health NHS Trust(巴特勒医院心脏中心,圣巴塞洛缪医院,巴特勒健康 NHS信托);Division of Cardiology, Johns Hopkins University School of Medicine(约翰霍普金斯大学医学院心脏病科)
提出Chain of Flow (COF)框架,利用患者特定MRI和当前ECG生成4D心脏电影,在UK Biobank上实现高图像保真度和下游功能性能。
Capital Normal University(首都师范大学);Beijing Advanced Innovation Center for Imaging Technology(北京成像理论与技术高精尖创新中心)
The morphological structure of left ventricle segmented from cardiac magnetic resonance images can be used to calculate key clinical parameters, and it is of great significance to the accurate and efficient diagnosis of cardiovascular diseases. Compared with traditional methods, the segmentation algorithms based on fully convolutional neural network greatly improve the accuracy of semantic segmentation. For the problem of left ventricular segmentation, a new fully convolutional neural network structure named MS-FCN is proposed in this paper. The MS-FCN network employs a multi-scale pooling mod…
We propose to learn a probabilistic motion model from a sequence of images. Besides spatio-temporal registration, our method offers to predict motion from a limited number of frames, useful for temporal super-resolution. The model is based on a probabilistic latent space and a novel temporal dropout training scheme. This enables simulation and interpolation of realistic motion patterns given only one or any subset of frames of a sequence. The encoded motion also allows to be transported from one subject to another without the need of inter-subject registration. An unsupervised generative defor…
Imperial College London(伦敦帝国学院);MRC London Institute of Medical Sciences(MRC伦敦医学科学研究所)
In the clinical routine, short axis (SA) cine cardiac MR (CMR) image stacks are acquired during multiple subsequent breath-holds. If the patient cannot consistently hold the breath at the same position, the acquired image stack will be affected by inter-slice respiratory motion and will not correctly represent the cardiac volume, introducing potential errors in the following analyses and visualisations. We propose an approach to automatically correct inter-slice respiratory motion in SA CMR image stacks. Our approach makes use of probabilistic segmentation maps (PSMs) of the left ventricular (…
CineMesh4D: Personalized 4D Whole Heart Reconstruction from Sparse Cine MRI
Department of Biomedical Engineering, National University of Singapore, Singapore(新加坡国立大学生物医学工程系);School of Automation, Southeast University, Nanjing, China(东南大学自动化学院);Department of Medicine, National University of Singapore, Singapore(新加坡国立大学医学系);Department of Cardiology, National University Heart Centre Singapore, Singapore(新加坡国立心脏中心心内科部)
本文提出 CineMesh4D,一种端到端的 4D 全心脏重建方法,通过跨域映射从多视角 2D cine MRI 直接重建患者特定的全心脏网格,提升重建质量和运动一致性。
Personalized 4D Whole Heart Geometry Reconstruction from Cine MRI for Cardiac Digital Twins
Department of Biomedical Engineering, National University of Singapore, Singapore(新加坡国立大学生物医学工程系);School of Data Science, Fudan University, Shanghai, China(复旦大学数据科学学院);Department of Engineering Science, University of Oxford, Oxford, UK(牛津大学工程科学系);Department of Medicine, National University of Singapore, Singapore(新加坡国立大学医学系);Department of Cardiology, National University Heart Centre Singapore, Singapore(新加坡国立心脏中心心内科部)
CineMyoPS: Segmenting Myocardial Pathologies from Cine Cardiac MR
School of Medical Imaging, Fujian Medical University(福建医科大学医学影像学院);College of Physics and Information Engineering, Fuzhou University(福州大学物理与信息工程学院);Department of Biomedical Engineering, National University of Singapore(新加坡国立大学生物医学工程系);School of Data Science, Fudan University(复旦大学数据科学学院);Department of Radiology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University(上海交通大学医学院仁济医院放射科)
University of Notre Dame(圣母大学);Guangdong Provincial People’s Hospital(广东省人民医院);IBM Thomas J. Watson Research Center(IBM托马斯·J·沃森研究中心)
Real-time cine magnetic resonance imaging (MRI) plays an increasingly important role in various cardiac interventions. In order to enable fast and accurate visual assistance, the temporal frames need to be segmented on-the-fly. However, state-of-the-art MRI segmentation methods are used either offline because of their high computation complexity, or in real-time but with significant accuracy loss and latency increase (causing visually noticeable lag). As such, they can hardly be adopted to assist visual guidance. In this work, inspired by a new interpretation of Independent Component Analysis …
ConvFormer3D-TAP: Phase/Uncertainty-Aware Front-End Fusion for Cine CMR View Classification Pipelines
Center for Artificial Intelligence, Bluhm Cardiovascular Institute, Northwestern Medicine(西北医学布鲁姆心血管研究所人工智能中心);Department of Electrical and Computer Engineering, Northwestern University(西北大学电气与计算机工程系);Department of Surgery, Northwestern University(西北大学外科学系);Department of Radiology, Northwestern University(西北大学放射学系);Xtasis Inc.(Xtasis公司);Department of Cardiology, The Prince Charles Hospital(查尔斯王子医院心脏病科);School of Medicine, The University of Queensland(昆士兰大学医学院);Quantiphi Inc.(Quantiphi公司)
Three-dimensional cine-MRI is of crucial importance for assessing the cardiac function. Features that describe the anatomy and function of cardiac structures (e.g. Left Ventricle (LV), Right Ventricle (RV), and Myocardium(MC)) are known to have significant diagnostic value and can be computed from 3D cine-MR images. However, these features require precise segmentation of cardiac structures. Among the fully automated segmentation methods, Fully Convolutional Networks (FCN) with Skip Connections have shown robustness in medical segmentation problems. In this study, we develop a complete pipeline…
Personalized 3D Myocardial Infarct Geometry Reconstruction from Cine MRI for Cardiac Digital Twins
Department of Biomedical Engineering, National University of Singapore(新加坡国立大学生物医学工程系);Department of Medicine, National University of Singapore(新加坡国立大学医学系);Department of Cardiology, National University Heart Centre Singapore(新加坡国立心脏中心心内科部)
German Cancer Research Center (DKFZ)(德国癌症研究中心(DKFZ));Mannheim University of Applied Science(曼海姆应用科学大学)
Cardiac magnetic resonance imaging improves on diagnosis of cardiovascular diseases by providing images at high spatiotemporal resolution. Manual evaluation of these time-series, however, is expensive and prone to biased and non-reproducible outcomes. In this paper, we present a method that addresses named limitations by integrating segmentation and disease classification into a fully automatic processing pipeline. We use an ensemble of UNet inspired architectures for segmentation of cardiac structures such as the left and right ventricular cavity (LVC, RVC) and the left ventricular myocardium…
Reconstruction of Cardiac Cine MRI Using Motion-Guided Deformable Alignment and Multi-Resolution Fusion
School of Health Science and Engineering, University of Shanghai for Science and Technology(上海理工大学健康科学与工程学院);ToolSensing Technologies Co., Ltd(拓深科技有限公司);School of Medical Instruments, Shanghai University of Medicine and Health Sciences(上海健康医学院医疗器械学院);Shanghai Key Laboratory of Multidimensional Information Processing, School of Communication & Electronic Engineering, East China Normal University(华东师范大学通信与电子工程学院多维信息处理上海重点实验室)
A novel neural network architecture, known as DL-ESPIRiT, is proposed to reconstruct rapidly acquired cardiac MRI data without field-of-view limitations which are present in previously proposed deep learning-based reconstruction frameworks. Additionally, a novel convolutional neural network based on separable 3D convolutions is integrated into DL-ESPIRiT to more efficiently learn spatiotemporal priors for dynamic image reconstruction. The network is trained on fully-sampled 2D cardiac cine datasets collected from eleven healthy volunteers with IRB approval. DL-ESPIRiT is compared against a sta…
Automatic segmentation of left ventricle (LV) myocardium in cardiac short-axis cine MR images acquired on subjects with myocardial infarction is a challenging task, mainly because of the various types of image inhomogeneity caused by the infarctions. Among the approaches proposed to automate the LV myocardium segmentation task, methods based upon deep convolutional neural networks (CNN) have demonstrated their exceptional accuracy and robustness in recent years. However, most of the CNN-based approaches treat the frames in a cardiac cycle independently, which fails to capture the valuable dyna…
CineMR: Tool-Integrated Vision-Language Reasoning for Quantitative Cardiac MRI Assessment
Institute for Artificial Intelligence, University of Central Florida(中佛罗里达大学人工智能研究所);Nemours Cardiac Center, Nemours Children’s Hospital, Florida(佛罗里达州内穆尔斯儿童医院内穆尔斯心脏中心);Children’s Heart Center, WVU Golisano Children’s, West Virginia(西弗吉尼亚大学戈利萨诺儿童医院儿童心脏中心);Department of Clinical Sciences, College of Medicine, University of Central Florida(中佛罗里达大学医学院临床科学系)
University of Notre Dame(圣母大学);Guangdong Cardiovascular Institute(广东省心血管病研究所);Guangdong Provincial People’s Hospital(广东省人民医院);Boston Children’s Hospital(波士顿儿童医院);Harvard Medical School(哈佛医学院);University of Pittsburgh(匹兹堡大学)
Real-time cardiac magnetic resonance imaging (MRI) plays an increasingly important role in guiding various cardiac interventions. In order to provide better visual assistance, the cine MRI frames need to be segmented on-the-fly to avoid noticeable visual lag. In addition, considering reliability and patient data privacy, the computation is preferably done on local hardware. State-of-the-art MRI segmentation methods mostly focus on accuracy only, and can hardly be adopted for real-time application or on local hardware. In this work, we present the first hardware-aware multi-scale neural archite…
Massachusetts General Hospital(麻省总医院);Harvard Medical School(哈佛医学院);University of Southern California(南加州大学)
Cardiac cine magnetic resonance imaging (MRI) has been used to characterize cardiovascular diseases (CVD), often providing a noninvasive phenotyping tool.~While recently flourished deep learning based approaches using cine MRI yield accurate characterization results, the performance is often degraded by small training samples. In addition, many deep learning models are deemed a ``black box," for which models remain largely elusive in how models yield a prediction and how reliable they are. To alleviate this, this work proposes a lightweight successive subspace learning (SSL) framework for CVD …
Personalized 4D Whole-Heart Mesh Reconstruction from Cine MRI via Multi-Scale Temporal Modeling and Differentiable Contour Rendering
Department of Biomedical Engineering, National University of Singapore(新加坡国立大学生物医学工程系);School of Automation, Southeast University(东南大学自动化学院);Department of Medicine, National University of Singapore(新加坡国立大学医学系);Department of Cardiology, National University Heart Centre Singapore(新加坡国立大学心脏中心心脏病学系)
School of Biomedical Engineering & Imaging Sciences, King’s College London, UK(伦敦国王学院生物医学工程与成像科学学院);Technical University of Munich, Germany(慕尼黑工业大学);Biomedical Image Analysis Group, Imperial College London, UK(帝国理工学院生物医学图像分析组);Department of Adult and Paediatric Cardiology, Guy’s and St Thomas’ NHS Foundation Trust, London, UK(盖伊和圣托马斯国民健康服务信托基金会成人及儿科心脏病科);Coimbra Institute for Biomedical Imaging and Translational Research, University of Coimbra, Portugal(科英布拉大学科英布拉生物医学成像与转化研究学院);Helmholtz Center Munich, Germany(慕尼黑亥姆霍兹中心)
Cine cardiac MRI is routinely acquired for the assessment of cardiac health, but the imaging process is slow and typically requires several breath-holds to acquire sufficient k-space profiles to ensure good image quality. Several undersampling-based reconstruction techniques have been proposed during the last decades to speed up cine cardiac MRI acquisition. However, the undersampling factor is commonly fixed to conservative values before acquisition to ensure diagnostic image quality, potentially leading to unnecessarily long scan times. In this paper, we propose an end-to-end quality-aware c…
Cine cardiac magnetic resonance (CMR) imaging is considered the gold standard for cardiac function evaluation. However, cine CMR acquisition is inherently slow and in recent decades considerable effort has been put into accelerating scan times without compromising image quality or the accuracy of derived results. In this paper, we present a fully-automated, quality-controlled integrated framework for reconstruction, segmentation and downstream analysis of undersampled cine CMR data. The framework enables active acquisition of radial k-space data, in which acquisition can be stopped as soon as …
A versatile foundation model for cine cardiac magnetic resonance image analysis tasks
UCL Hawkes Institute, Department of Medical Physics and Biomedical Engineering, University College London(伦敦大学霍克斯研究所、医学物理与生物医学工程系、伦敦大学学院);InstaDeep;Department of Computing, Imperial College London(伦敦帝国学院计算机系);Department of Brain Sciences, Imperial College London(伦敦帝国学院脑科学系);Institute of Cardiovascular Sciences, University College London(伦敦大学学院心血管科学研究所);Barts Heart Centre, Barts Health NHS Trust(巴特斯心脏中心、巴特斯健康 NHS信托)
KP-INR: A Dual-Branch Implicit Neural Representation Model for Cardiac Cine MRI Reconstruction
Department of Radiology, Leiden University Medical Center, Leiden, The Netherlands(莱顿大学医学中心放射科);Cardiologs, Philips, Paris, France(法国巴黎Philips心血管部门);Faculty of Computer Science, Eindhoven University of Technology, Eindhoven, The Netherlands(埃因霍温理工大学计算机科学学院);Philips Innovative Technologies, Hamburg, Germany(德国汉堡Philips创新技术)
Istanbul Technical University(伊斯坦布尔理工大学);King’s College London(伦敦国王学院)
Segmenting anatomical structures in medical images has been successfully addressed with deep learning methods for a range of applications. However, this success is heavily dependent on the quality of the image that is being segmented. A commonly neglected point in the medical image analysis community is the vast amount of clinical images that have severe image artefacts due to organ motion, movement of the patient and/or image acquisition related issues. In this paper, we discuss the implications of image motion artefacts on cardiac MR segmentation and compare a variety of approaches for joint…
With the advent of Cardiac Cine Magnetic Resonance (CMR) Imaging, there has been a paradigm shift in medical technology, thanks to its capability of imaging different structures within the heart without ionizing radiation. However, it is very challenging to conduct pre-operative planning of minimally invasive cardiac procedures without accurate segmentation and identification of the left ventricle (LV), right ventricle (RV) blood-pool, and LV-myocardium. Manual segmentation of those structures, nevertheless, is time-consuming and often prone to error and biased outcomes. Hence, automatic and c…
Klinikum Rechts der Isar, Technical University of Munich(慕尼黑工业大学伊萨尔河右岸医院);Imperial College London(伦敦帝国理工学院);University Hospital of Tübingen(图宾根大学医院)
Motion-compensated MR reconstruction (MCMR) is a powerful concept with considerable potential, consisting of two coupled sub-problems: Motion estimation, assuming a known image, and image reconstruction, assuming known motion. In this work, we propose a learning-based self-supervised framework for MCMR, to efficiently deal with non-rigid motion corruption in cardiac MR imaging. Contrary to conventional MCMR methods in which the motion is estimated prior to reconstruction and remains unchanged during the iterative optimization process, we introduce a dynamic motion estimation process and embed …
Personalized 3D Myocardial Infarct Geometry Reconstruction from Cine MRI with Explicit Cardiac Motion Modeling
Department of Biomedical Engineering, National University of Singapore, Singapore(新加坡国立大学生物医学工程系);Department of Computer Science, National University of Singapore, Singapore(新加坡国立大学计算机科学系);Auckland Bioengineering Institute, University of Auckland, Auckland, New Zealand(奥克兰大学生物工程研究所);School of Biomedical Engineering and Imaging Sciences, King’s College London, UK(伦敦国王学院生物医学工程与成像科学学校);Department of Medicine, National University of Singapore, Singapore(新加坡国立大学医学系);Department of Cardiology, National University Heart Centre Singapore, Singapore(新加坡国立心脏中心心血管科)
Temporally Consistent and Controllable Video Generation of 2D Cine CMR via Latent Space Motion Modeling
Suzhou Institute of Biomedical Engineering and Technology, Chinese Academy of Sciences(苏州生物医学工程与技术研究所,中国科学院);SyCoIA, IMT Mines Ales(SyCoIA,IMT Mines Ales)
University of Sheffield(谢菲尔德大学);University of Leeds(利兹大学);University of Oxford(牛津大学);John Radcliffe Hospital(约翰·拉德克利夫医院);Queen Mary University of London(伦敦玛丽女王大学);Barts Health NHS Trust(巴特国民保健署信托基金会)
Cardiac magnetic resonance (CMR) images play a growing role in the diagnostic imaging of cardiovascular diseases. Full coverage of the left ventricle (LV), from base to apex, is a basic criterion for CMR image quality and necessary for accurate measurement of cardiac volume and functional assessment. Incomplete coverage of the LV is identified through visual inspection, which is time-consuming and usually done retrospectively in the assessment of large imaging cohorts. This paper proposes a novel automatic method for determining LV coverage from CMR images by using Fisher-discriminative three-…
Gabor Primitives for Accelerated Cardiac Cine MRI Reconstruction
Chair for AI in Healthcare and Medicine, Technical University of Munich (TUM) and TUM University Hospital, Munich, Germany(人工智能在医疗与医学中的chair,慕尼黑技术大学(TUM)和慕尼黑技术大学医院,德国慕尼黑);School of Computation and Information Technology, Technical University of Munich, Munich, Germany(计算与信息科技学院,慕尼黑技术大学,德国慕尼黑);Institute of Machine Learning in Biomedical Imaging, Helmholtz Munich, Neuherberg, Germany(生物医学影像中的机器学习研究所,海德堡慕尼黑,德国纽赫堡);Department of Radiology, Boston Children's Hospital and Harvard Medical School, Boston, USA(放射科,波士顿儿童医院和哈佛医学院,美国波士顿);Munich Center for Machine Learning, Technical University of Munich, Munich, Germany(慕尼黑机器学习中心,慕尼黑技术大学,德国慕尼黑);GE HealthCare, Munich, Germany(通用电气医疗系统,德国慕尼黑);School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom(生物医学工程与成像科学学院,伦敦国王学院,英国伦敦);Department of Computing, Imperial College London, London, United Kingdom(计算学院,伦敦帝国学院,英国伦敦)
本文提出 Gabor 原始要素用于加速心脏 cine MRI 重建,通过调制高斯包络实现灵活频谱支持,提升对光滑结构和锐利边界的表示能力。
We propose a method to classify cardiac pathology based on a novel approach to extract image derived features to characterize the shape and motion of the heart. An original semi-supervised learning procedure, which makes efficient use of a large amount of non-segmented images and a small amount of images segmented manually by experts, is developed to generate pixel-wise apparent flow between two time points of a 2D+t cine MRI image sequence. Combining the apparent flow maps and cardiac segmentation masks, we obtain a local apparent flow corresponding to the 2D motion of myocardium and ventricu…
Enhancing Implicit Neural Representations with Image Feature Embedding for Unsupervised Cardiac Cine MRI Reconstruction
Division of Image Processing, Department of Radiology, Leiden University Medical Center(莱顿大学医学中心放射科图像处理部);C.J. Gorter Center, Department of Radiology, Leiden University Medical Center(莱顿大学医学中心放射科C.J. 戈特中心);Cardio Vascular Imaging Group, Department of Radiology, Leiden University Medical Center(莱顿大学医学中心放射科心血管成像组);Philips Innovative Technologies(飞利浦创新技术公司)
CMRINet: Joint Groupwise Registration and Segmentation for Cardiac Function Quantification from Cine-MRI
Leiden University Medical Center(莱顿大学医学中心);University of Sheffield(谢菲尔德大学);INSIGNEO;Institute for In Silico Medicine(计算医学研究所);Department of Infection, Immunity and Cardiovascular Disease(感染、免疫与心血管疾病部门);Sheffield Teaching Hospitals(谢菲尔德教学医院);Department of Clinical Radiology(临床放射学部门)
Massachusetts General Hospital(麻省总医院);Harvard Medical School(哈佛医学院);National Taiwan University(台湾大学);University of Southern California(南加州大学)
Assessment of cardiovascular disease (CVD) with cine magnetic resonance imaging (MRI) has been used to non-invasively evaluate detailed cardiac structure and function. Accurate segmentation of cardiac structures from cine MRI is a crucial step for early diagnosis and prognosis of CVD, and has been greatly improved with convolutional neural networks (CNN). There, however, are a number of limitations identified in CNN models, such as limited interpretability and high complexity, thus limiting their use in clinical practice. In this work, to address the limitations, we propose a lightweight and i…
Cine cardiac MRI reconstruction using a convolutional recurrent network with refinement
Institute for Digital Communications, University of Edinburgh(爱丁堡大学数字通信研究所);Institute of Information Science and Technologies “Alessandro Faedo”, National Research Council of Italy (CNR)(意大利国家研究委员会信息科学与技术研究所(亚历山德罗·法埃多));Department of Information Engineering, University of Pisa(比萨大学信息工程系);Institute for Infrastructure and Environment, University of Edinburgh(爱丁堡大学基础设施与环境研究所);The Alan Turing Institute(阿兰·图灵研究所)
Contrast-Free Myocardial Scar Segmentation in Cine MRI using Motion and Texture Fusion
University of Oxford(牛津大学);University of Southampton(南安普顿大学);National University of Singapore(新加坡国立大学);Fudan University(复旦大学);Zhongshan Hospital, Fudan University(复旦大学附属中山医院)