Towards Cardiac Intervention Assistance: Hardware-aware Neural Architecture Exploration for Real-Time 3D Cardiac Cine MRI Segmentation
University of Notre Dame（圣母大学）；Guangdong Cardiovascular Institute（广东省心血管病研究所）；Guangdong Provincial People’s Hospital（广东省人民医院）；Boston Children’s Hospital（波士顿儿童医院）；Harvard Medical School（哈佛医学院）；University of Pittsburgh（匹兹堡大学）
Real-time cardiac magnetic resonance imaging (MRI) plays an increasingly important role in guiding various cardiac interventions. In order to provide better visual assistance, the cine MRI frames need to be segmented on-the-fly to avoid noticeable visual lag. In addition, considering reliability and patient data privacy, the computation is preferably done on local hardware. State-of-the-art MRI segmentation methods mostly focus on accuracy only, and can hardly be adopted for real-time application or on local hardware. In this work, we present the first hardware-aware multi-scale neural architecture search (NAS) framework for real-time 3D cardiac cine MRI segmentation. The proposed framework incorporates a latency regularization term into the loss function to handle real-time constraints, with the consideration of underlying hardware. In addition, the formulation is fully differentiable with respect to the architecture parameters, so that stochastic gradient descent (SGD) can be used for optimization to reduce the computation cost while maintaining optimization quality. Experimental results on ACDC MICCAI 2017 dataset demonstrate that our hardware-aware multi-scale NAS framework can reduce the latency by up to 3.5 times and satisfy the real-time constraints, while still achieving competitive segmentation accuracy, compared with the state-of-the-art NAS segmentation framework.
Klinikum Rechts der Isar, Technical University of Munich（慕尼黑工业大学伊萨尔河右岸医院）；Imperial College London（伦敦帝国理工学院）；University Hospital of Tübingen（图宾根大学医院）
Motion-compensated MR reconstruction (MCMR) is a powerful concept with considerable potential, consisting of two coupled sub-problems: Motion estimation, assuming a known image, and image reconstruction, assuming known motion. In this work, we propose a learning-based self-supervised framework for MCMR, to efficiently deal with non-rigid motion corruption in cardiac MR imaging. Contrary to conventional MCMR methods in which the motion is estimated prior to reconstruction and remains unchanged during the iterative optimization process, we introduce a dynamic motion estimation process and embed …
University of Notre Dame（圣母大学）；Guangdong Provincial People’s Hospital（广东省人民医院）；Zhejiang University（浙江大学）；University of New Mexico（新墨西哥大学）
Accurately segmenting temporal frames of cine magnetic resonance imaging (MRI) is a crucial step in various real-time MRI guided cardiac interventions. To achieve fast and accurate visual assistance, there are strict requirements on the maximum latency and minimum throughput of the segmentation framework. State-of-the-art neural networks on this task are mostly hand-crafted to satisfy these constraints while achieving high accuracy. On the other hand, while existing literature have demonstrated the power of neural architecture search (NAS) in automatically identifying the best neural architect…
Subspace Implicit Neural Representations for Real-Time Cardiac Cine MR Imaging
Technical University of Munich（慕尼黑工业大学）；Helmholtz Munich（亥姆霍兹慕尼黑中心）；University of Tübingen（蒂宾根大学）；University of Michigan（密歇根大学）；Pontificia Universidad Católica de Chile（智利天主教大学）；King’s College London（伦敦国王学院）；Imperial College London（帝国理工学院）
Image Sciences Institute, University Medical Center Utrecht（乌得勒支大学医学中心影像科学研究所）；Department of Radiology, University Medical Center Utrecht（乌得勒支大学医学中心放射科）
Segmentation of the heart in cardiac cine MR is clinically used to quantify cardiac function. We propose a fully automatic method for segmentation and disease classification using cardiac cine MR images. A convolutional neural network (CNN) was designed to simultaneously segment the left ventricle (LV), right ventricle (RV) and myocardium in end-diastole (ED) and end-systole (ES) images. Features derived from the obtained segmentations were used in a Random Forest classifier to label patients as suffering from dilated cardiomyopathy, hypertrophic cardiomyopathy, heart failure following myocard…
National Library of Medicine, National Institutes of Health（美国国立卫生研究院国家医学图书馆）；Rochester Institute of Technology（罗切斯特理工学院）；TAJ Technologies Inc.（TAJ科技公司）
Segmentation of the left ventricle and quantification of various cardiac contractile functions is crucial for the timely diagnosis and treatment of cardiovascular diseases. Traditionally, the two tasks have been tackled independently. Here we propose a convolutional neural network based multi-task learning approach to perform both tasks simultaneously, such that, the network learns better representation of the data with improved generalization performance. Probabilistic formulation of the problem enables learning the task uncertainties during the training, which are used to automatically compu…
United Imaging Intelligence（联影智能）；UIH America, Inc.（联影美国公司）；United Imaging Healthcare（联影医疗）
Retrospectively gated cine (retro-cine) MRI is the clinical standard for cardiac functional analysis. Deep learning (DL) based methods have been proposed for the reconstruction of highly undersampled MRI data and show superior image quality and magnitude faster reconstruction time than CS-based methods. Nevertheless, it remains unclear whether DL reconstruction is suitable for cardiac function analysis. To address this question, in this study we evaluate and compare the cardiac functional values (EDV, ESV and EF for LV and RV, respectively) obtained from highly accelerated MRI acquisition usin…
United Imaging Intelligence（联影智能）；UIH America, Inc.（联影美国公司）
Real-time cardiac cine MRI does not require ECG gating in the data acquisition and is more useful for patients who can not hold their breaths or have abnormal heart rhythms. However, to achieve fast image acquisition, real-time cine commonly acquires highly undersampled data, which imposes a significant challenge for MRI image reconstruction. We propose a residual convolutional RNN for real-time cardiac cine reconstruction. To the best of our knowledge, this is the first work applying deep learning approach to Cartesian real-time cardiac cine reconstruction. Based on the evaluation from radiol…
University of Kansas（堪萨斯大学）；Rochester Institute of Technology（罗切斯特理工学院）
Patient-specific left ventricle (LV) myocardial models have the potential to be used in a variety of clinical scenarios for improved diagnosis and treatment plans. Cine cardiac magnetic resonance (MR) imaging provides high resolution images to reconstruct patient-specific geometric models of the LV myocardium. With the advent of deep learning, accurate segmentation of cardiac chambers from cine cardiac MR images and unsupervised learning for image registration for cardiac motion estimation on a large number of image datasets is attainable. Here, we propose a deep leaning-based framework for th…
School of Biomedical Engineering & Imaging Sciences, King’s College London, UK（伦敦国王学院生物医学工程与成像科学学院）；Technical University of Munich, Germany（慕尼黑工业大学）；Biomedical Image Analysis Group, Imperial College London, UK（帝国理工学院生物医学图像分析组）；Department of Adult and Paediatric Cardiology, Guy’s and St Thomas’ NHS Foundation Trust, London, UK（盖伊和圣托马斯国民健康服务信托基金会成人及儿科心脏病科）；Coimbra Institute for Biomedical Imaging and Translational Research, University of Coimbra, Portugal（科英布拉大学科英布拉生物医学成像与转化研究学院）；Helmholtz Center Munich, Germany（慕尼黑亥姆霍兹中心）
Cine cardiac MRI is routinely acquired for the assessment of cardiac health, but the imaging process is slow and typically requires several breath-holds to acquire sufficient k-space profiles to ensure good image quality. Several undersampling-based reconstruction techniques have been proposed during the last decades to speed up cine cardiac MRI acquisition. However, the undersampling factor is commonly fixed to conservative values before acquisition to ensure diagnostic image quality, potentially leading to unnecessarily long scan times. In this paper, we propose an end-to-end quality-aware c…
Intensity-based 3D motion correction for cardiac MR images
Munich Center for Machine Learning, Technical University Munich（慕尼黑工业大学慕尼黑机器学习中心）；School of Computation, Information and Technology, Technical University Munich（慕尼黑工业大学计算、信息与技术学院）；Klinikum Rechts der Isar, Technical University Munich（慕尼黑工业大学右岸医院）；Department of Computing, Imperial College London（伦敦帝国理工学院计算系）
Cine cardiac magnetic resonance (CMR) imaging is considered the gold standard for cardiac function evaluation. However, cine CMR acquisition is inherently slow and in recent decades considerable effort has been put into accelerating scan times without compromising image quality or the accuracy of derived results. In this paper, we present a fully-automated, quality-controlled integrated framework for reconstruction, segmentation and downstream analysis of undersampled cine CMR data. The framework enables active acquisition of radial k-space data, in which acquisition can be stopped as soon as …
Personalized 4D Whole Heart Geometry Reconstruction from Cine MRI for Cardiac Digital Twins
Department of Biomedical Engineering, National University of Singapore, Singapore（新加坡国立大学生物医学工程系）；School of Data Science, Fudan University, Shanghai, China（复旦大学数据科学学院）；Department of Engineering Science, University of Oxford, Oxford, UK（牛津大学工程科学系）；Department of Medicine, National University of Singapore, Singapore（新加坡国立大学医学系）；Department of Cardiology, National University Heart Centre Singapore, Singapore（新加坡国立心脏中心心内科部）
Massachusetts General Hospital（麻省总医院）；Harvard Medical School（哈佛医学院）；National Taiwan University（台湾大学）；University of Southern California（南加州大学）
Assessment of cardiovascular disease (CVD) with cine magnetic resonance imaging (MRI) has been used to non-invasively evaluate detailed cardiac structure and function. Accurate segmentation of cardiac structures from cine MRI is a crucial step for early diagnosis and prognosis of CVD, and has been greatly improved with convolutional neural networks (CNN). There, however, are a number of limitations identified in CNN models, such as limited interpretability and high complexity, thus limiting their use in clinical practice. In this work, to address the limitations, we propose a lightweight and i…
Cine cardiac MRI reconstruction using a convolutional recurrent network with refinement
Institute for Digital Communications, University of Edinburgh（爱丁堡大学数字通信研究所）；Institute of Information Science and Technologies “Alessandro Faedo”, National Research Council of Italy (CNR)（意大利国家研究委员会信息科学与技术研究所（亚历山德罗·法埃多））；Department of Information Engineering, University of Pisa（比萨大学信息工程系）；Institute for Infrastructure and Environment, University of Edinburgh（爱丁堡大学基础设施与环境研究所）；The Alan Turing Institute（阿兰·图灵研究所）
CineMyoPS: Segmenting Myocardial Pathologies from Cine Cardiac MR
School of Medical Imaging, Fujian Medical University（福建医科大学医学影像学院）；College of Physics and Information Engineering, Fuzhou University（福州大学物理与信息工程学院）；Department of Biomedical Engineering, National University of Singapore（新加坡国立大学生物医学工程系）；School of Data Science, Fudan University（复旦大学数据科学学院）；Department of Radiology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University（上海交通大学医学院仁济医院放射科）
University of Notre Dame（圣母大学）；Guangdong Provincial People’s Hospital（广东省人民医院）；IBM Thomas J. Watson Research Center（IBM托马斯·J·沃森研究中心）
Real-time cine magnetic resonance imaging (MRI) plays an increasingly important role in various cardiac interventions. In order to enable fast and accurate visual assistance, the temporal frames need to be segmented on-the-fly. However, state-of-the-art MRI segmentation methods are used either offline because of their high computation complexity, or in real-time but with significant accuracy loss and latency increase (causing visually noticeable lag). As such, they can hardly be adopted to assist visual guidance. In this work, inspired by a new interpretation of Independent Component Analysis …
In this work, we implement a fully convolutional segmenter featuring both a learned group structure and a regularized weight-pruner to reduce the high computational cost in volumetric image segmentation. We validated our framework on the ACDC dataset featuring one healthy and four pathology groups imaged throughout the cardiac cycle. Our technique achieved Dice scores of 96.8% (LV blood-pool), 93.3% (RV blood-pool) and 90.0% (LV Myocardium) with five-fold cross-validation and yielded similar clinical parameters as those estimated from the ground truth segmentation data. Based on these results,…
Reconstruction of Cardiac Cine MRI Using Motion-Guided Deformable Alignment and Multi-Resolution Fusion
School of Health Science and Engineering, University of Shanghai for Science and Technology（上海理工大学健康科学与工程学院）；ToolSensing Technologies Co., Ltd（拓深科技有限公司）；School of Medical Instruments, Shanghai University of Medicine and Health Sciences（上海健康医学院医疗器械学院）；Shanghai Key Laboratory of Multidimensional Information Processing, School of Communication & Electronic Engineering, East China Normal University（华东师范大学通信与电子工程学院多维信息处理上海重点实验室）
Rensselaer Polytechnic Institute（伦斯勒理工学院）；Cedars-Sinai Medical Center（西达赛奈医疗中心）；University of California, Los Angeles（加州大学洛杉矶分校）
Cine cardiac magnetic resonance imaging (MRI) is widely used for diagnosis of cardiac diseases thanks to its ability to present cardiovascular features in excellent contrast. As compared to computed tomography (CT), MRI, however, requires a long scan time, which inevitably induces motion artifacts and causes patients' discomfort. Thus, there has been a strong clinical motivation to develop techniques to reduce both the scan time and motion artifacts. Given its successful applications in other medical imaging tasks such as MRI super-resolution and CT metal artifact reduction, deep learning is a…
Imperial College London（帝国理工学院）；Technical University Munich（慕尼黑工业大学）；University of Edinburgh（爱丁堡大学）；MRC London Institute of Medical Sciences（MRC伦敦医学科学研究所）
Recovering the 3D motion of the heart from cine cardiac magnetic resonance (CMR) imaging enables the assessment of regional myocardial function and is important for understanding and analyzing cardiovascular disease. However, 3D cardiac motion estimation is challenging because the acquired cine CMR images are usually 2D slices which limit the accurate estimation of through-plane motion. To address this problem, we propose a novel multi-view motion estimation network (MulViMotion), which integrates 2D cine CMR images acquired in short-axis and long-axis planes to learn a consistent 3D motion fi…
Massachusetts General Hospital（麻省总医院）；Harvard Medical School（哈佛医学院）；University of Southern California（南加州大学）
Cardiac cine magnetic resonance imaging (MRI) has been used to characterize cardiovascular diseases (CVD), often providing a noninvasive phenotyping tool.~While recently flourished deep learning based approaches using cine MRI yield accurate characterization results, the performance is often degraded by small training samples. In addition, many deep learning models are deemed a ``black box," for which models remain largely elusive in how models yield a prediction and how reliable they are. To alleviate this, this work proposes a lightweight successive subspace learning (SSL) framework for CVD …
A versatile foundation model for cine cardiac magnetic resonance image analysis tasks
UCL Hawkes Institute, Department of Medical Physics and Biomedical Engineering, University College London（伦敦大学霍克斯研究所、医学物理与生物医学工程系、伦敦大学学院）；InstaDeep；Department of Computing, Imperial College London（伦敦帝国学院计算机系）；Department of Brain Sciences, Imperial College London（伦敦帝国学院脑科学系）；Institute of Cardiovascular Sciences, University College London（伦敦大学学院心血管科学研究所）；Barts Heart Centre, Barts Health NHS Trust（巴特斯心脏中心、巴特斯健康 NHS信托）
ECGFlowCMR: Pretraining with ECG-Generated Cine CMR Helps Cardiac Disease Classification and Phenotype Prediction
School of Intelligence Science and Technology, Peking University（北京大学智能科学与技术学院）；Polytechnic Institute of Zhejiang University, Zhejiang University（浙江大学 polytechnic 院）；Institute of Computing Technology, University of the Chinese Academy of Sciences（中国科学院计算技术研究所）；National Institute of Health Data Science, Peking University（北京大学健康数据科学国家研究院）；Institute of Microelectronics, University of the Chinese Academy of Sciences（中国科学院微电子研究所）；Department of Cardiology, Zhejiang University（浙江大学心内科部）
Cardiac cine magnetic resonance imaging (MRI) can be considered the optimal criterion for measuring cardiac function. This imaging technique can provide us with detailed information about cardiac structure, tissue composition and even blood flow. This work considers the application of the higher order dynamic mode decomposition (HODMD) method to a set of MR images of a heart, with the ultimate goal of identifying the main patterns and frequencies driving the heart dynamics. A novel algorithm based on singular value decomposition combined with HODMD is introduced, providing a three-dimensional …
Personalized 3D Myocardial Infarct Geometry Reconstruction from Cine MRI with Explicit Cardiac Motion Modeling
Department of Biomedical Engineering, National University of Singapore, Singapore（新加坡国立大学生物医学工程系）；Department of Computer Science, National University of Singapore, Singapore（新加坡国立大学计算机科学系）；Auckland Bioengineering Institute, University of Auckland, Auckland, New Zealand（奥克兰大学生物工程研究所）；School of Biomedical Engineering and Imaging Sciences, King’s College London, UK（伦敦国王学院生物医学工程与成像科学学校）；Department of Medicine, National University of Singapore, Singapore（新加坡国立大学医学系）；Department of Cardiology, National University Heart Centre Singapore, Singapore（新加坡国立心脏中心心血管科）
Training deep learning based dynamic MR image reconstruction using synthetic fractals
UCL Centre for Translational Cardiovascular Imaging, University College London（伦敦大学学院UCL转化心血管影像中心）；Department of Cardiology, Royal Free London NHS Foundation Trust（皇家自由伦敦NHS基金会信托心脏病科）；Institute of Cardiovascular Science, University College London（伦敦大学学院心血管科学研究所）
Universitat Pompeu Fabra（庞培法布拉大学）；BCN MedTech（巴塞罗那医疗科技中心）；Queen Mary University of London（伦敦玛丽女王大学）；William Harvey Research Institute（威廉·哈维研究所）；Stanford University（斯坦福大学）；Catalan Institution for Research and Advanced Studies (ICREA)（加泰罗尼亚研究与高级研究所）
Use expert visualization or conventional clinical indices can lack accuracy for borderline classications. Advanced statistical approaches based on eigen-decomposition have been mostly concerned with shape and motion indices. In this paper, we present a new approach to identify CVDs from cine-MRI by estimating large pools of radiomic features (statistical, shape and textural features) encoding relevant changes in anatomical and image characteristics due to CVDs. The calculated cine-MRI radiomic features are assessed using sequential forward feature selection to identify the most relevant ones f…
Gabor Primitives for Accelerated Cardiac Cine MRI Reconstruction
Chair for AI in Healthcare and Medicine, Technical University of Munich (TUM) and TUM University Hospital, Munich, Germany（人工智能在医疗与医学中的chair，慕尼黑技术大学（TUM）和慕尼黑技术大学医院，德国慕尼黑）；School of Computation and Information Technology, Technical University of Munich, Munich, Germany（计算与信息科技学院，慕尼黑技术大学，德国慕尼黑）；Institute of Machine Learning in Biomedical Imaging, Helmholtz Munich, Neuherberg, Germany（生物医学影像中的机器学习研究所，海德堡慕尼黑，德国纽赫堡）；Department of Radiology, Boston Children's Hospital and Harvard Medical School, Boston, USA（放射科，波士顿儿童医院和哈佛医学院，美国波士顿）；Munich Center for Machine Learning, Technical University of Munich, Munich, Germany（慕尼黑机器学习中心，慕尼黑技术大学，德国慕尼黑）；GE HealthCare, Munich, Germany（通用电气医疗系统，德国慕尼黑）；School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom（生物医学工程与成像科学学院，伦敦国王学院，英国伦敦）；Department of Computing, Imperial College London, London, United Kingdom（计算学院，伦敦帝国学院，英国伦敦）
本文提出 Gabor 原始要素用于加速心脏 cine MRI 重建，通过调制高斯包络实现灵活频谱支持，提升对光滑结构和锐利边界的表示能力。
Purpose: To develop a method for banding-free bSSFP cardiac cine with substantially reduced flow artifacts. Methods: A projection-reconstruction (PR) trajectory is proposed for a frequency-modulated cine sequence, facilitating reconstruction of three phase cycles and a field-map time series from a short, breath-held scan. Data is also acquired during the gradient rewinders to enable generation of field maps using BMART, B$_0$ mapping using rewinding trajectories, where the rewind data forms the second TE image for calculating the field map. A field-map-based combination method is developed whi…
WarpPINN: Cine-MR image registration with physics-informed neural networks
University of Bath（巴斯大学）；Pontificia Universidad Católica de Valparaíso（瓦尔帕莱索天主大学）；Millennium Institute for Intelligent Healthcare Engineering（千年智能医疗工程研究所）；Pontificia Universidad Católica de Chile（智利天主大学）
Respiratory motion can cause strong blurring artifacts in the reconstructed image during MR acquisition. These artifacts become more prominent when use in the presence of undersampled data. Recently, compressed sensing (CS) is developed as an MR reconstruction technique, to recover good quality images from the compressive k-space samples. To maximize the benefits of CS in free breathing data, it is understandable to use CS with the motion corrected images. In this paper, we have developed a new CS based motion corrected image reconstruction technique. In this two-stage technique, we use simila…
Contrast-Free Myocardial Scar Segmentation in Cine MRI using Motion and Texture Fusion
University of Oxford（牛津大学）；University of Southampton（南安普顿大学）；National University of Singapore（新加坡国立大学）；Fudan University（复旦大学）；Zhongshan Hospital, Fudan University（复旦大学附属中山医院）
WarpPINN-fibers: improved cardiac strain estimation from cine-MR with physics-informed neural networks
Millennium Institute for Intelligent Healthcare Engineering, iHEALTH；Department of Mechanical；Metallurgical Engineering, School of Engineering, Pontificia Universidad Cat\'olica de Chile, Santiago, Chile；Institute for Biological；Medical Engineering, Schools of Engineering, Medicine
We introduce a kernel low-rank algorithm to recover free-breathing and ungated dynamic MRI from spiral acquisitions without explicit k-space navigators. It is often challenging for low-rank methods to recover free-breathing and ungated images from undersampled measurements; extensive cardiac and respiratory motion often results in the Casorati matrix not being sufficiently low-rank. Therefore, we exploit the non-linear structure of the dynamic data, which gives the low-rank kernel matrix. Unlike prior work that rely on navigators to estimate the manifold structure, we propose a kernel low-rank…
Rutgers University（罗格斯大学）；SenseBrain Research（SenseBrain研究院）；University of Arkansas for Medical Sciences（阿肯色大学医学院）；Lund University（隆德大学）；New York University（纽约大学）
Joint 2D cardiac segmentation and 3D volume reconstruction are fundamental to building statistical cardiac anatomy models and understanding functional mechanisms from motion patterns. However, due to the low through-plane resolution of cine MR and high inter-subject variance, accurately segmenting cardiac images and reconstructing the 3D volume are challenging. In this study, we propose an end-to-end latent-space-based framework, DeepRecon, that generates multiple clinically essential outcomes, including accurate image segmentation, synthetic high-resolution 3D image, and 3D reconstructed volu…
National Heart, Lung and Blood Institute, National Institutes of Health（美国国立卫生研究院心肺血液研究所）；Barts Heart Centre, Barts Health NHS Trust（巴特健康国民保健信托巴特心脏中心）；National Amyloidosis Centre, Royal Free Hospital（皇家自由医院国家淀粉样变性病中心）
Purpose: To develop a convolutional neural network (CNN) solution for robust landmark detection in cardiac MR images. Methods: This retrospective study included cine, LGE and T1 mapping scans from two hospitals. The training set included 2,329 patients and 34,019 images. A hold-out test set included 531 patients and 7,723 images. CNN models were developed to detect two mitral valve plane and apical points on long-axis (LAX) images. On short-axis (SAX) images, anterior and posterior RV insertion points and LV center were detected. Model outputs were compared to manual labels by two operators fo…
GSMorph: Gradient Surgery for cine-MRI Cardiac Deformable Registration
University of Leeds（利兹大学）；Radboud University Medical Centre（拉德堡德大学医学中心）；Netherlands Cancer Institute（荷兰癌症研究所）；Shenzhen University（深圳大学）；Shenzhen RayShape Medical Technology Co., Ltd（深圳睿心医疗科技有限公司）
In real-time (RT) cardiac cine imaging, a stack of 2D slices is collected sequentially under free-breathing conditions. A complete heartbeat from each slice is then used for cardiac function quantification. The inter-slice respiratory mismatch can compromise accurate quantification of cardiac function. Methods based on principal components analysis (PCA) have been proposed to extract the respiratory signal from RT cardiac cine, but these methods cannot resolve the inter-slice sign ambiguity of the respiratory signal. In this work, we propose a fully automatic sign correction procedure based on…
The University of British Columbia（不列颠哥伦比亚大学）；Vancouver General Hospital（温哥华综合医院）
In echocardiography (echo), an electrocardiogram (ECG) is conventionally used to temporally align different cardiac views for assessing critical measurements. However, in emergencies or point-of-care situations, acquiring an ECG is often not an option, hence motivating the need for alternative temporal synchronization methods. Here, we propose Echo-SyncNet, a self-supervised learning framework to synchronize various cross-sectional 2D echo series without any external input. The proposed framework takes advantage of both intra-view and inter-view self supervisions. The former relies on spatiote…
University of Florida（佛罗里达大学）；United Imaging Intelligence（联影智能）；University of Illinois at Urbana-Champaign（伊利诺伊大学厄巴纳-香槟分校）
Cardiac motion estimation is critical to the assessment of cardiac function. Myocardium feature tracking (FT) can directly estimate cardiac motion from cine MRI, which requires no special scanning procedure. However, current deep learning-based FT methods may result in unrealistic myocardium shapes since the learning is solely guided by image intensities without considering anatomy. On the other hand, motion estimation through learning is challenging because ground-truth motion fields are almost impossible to obtain. In this study, we propose a novel Anatomy-Aware Tracker (AATracker) for cardi…
Fully Automated Assessment of Cardiac Coverage in Cine Cardiovascular Magnetic Resonance Images using an Explainable Deep Visual Salient Region Detection Model
Learning from Acquisition: Metadata-driven Multimodal Pre-training for Cardiac MRI
Department of Surgery & Cancer（外科与癌症系）；Bioengineering Department and Imperial-X（生物工程系和Imperial-X）；National Heart and Lung Institute（国家心脏和肺研究所）；Cardiovascular Research Centre（心血管研究中心）；School of Biomedical Engineering & Imaging Sciences（生物医学工程与成像科学学院）
Attention Incorporated Network for Sharing Low-rank, Image and K-space Information during MR Image Reconstruction to Achieve Single Breath-hold Cardiac Cine Imaging
University of Tuebingen（蒂宾根大学）；Technical University of Munich（慕尼黑工业大学）；Imperial College London（伦敦帝国学院）；Stanford University（斯坦福大学）；Klinikum Rechts der Isar, Technical University of Munich（慕尼黑工业大学右岸医院）
In this work, we proposed a continuous-acquisition strategy using a gradient echo (GRE) inversion recovery sequence based on spiral trajectories to simultaneously obtain the $T_1$ mapping and CINE imaging. The acquisition is using a free-breathing and ungated fashion. An approach based on variational auto-encoder(VAE) is used for the motion estimation from the centered k-space data. The motion signal is then used to train a deep manifold reconstruction algorithm for image reconstruction. Once the network is trained, we can excite the latent vectors (the estimated motion signals and the contras…
King’s College London（伦敦国王学院）；Guy’s and St Thomas’ NHS Foundation Trust（盖伊和圣托马斯国民保健基金会信托）；University Medical Center Utrecht（乌得勒支大学医学中心）
Current artificial intelligence (AI) algorithms for short-axis cardiac magnetic resonance (CMR) segmentation achieve human performance for slices situated in the middle of the heart. However, an often-overlooked fact is that segmentation of the basal and apical slices is more difficult. During manual analysis, differences in the basal segmentations have been reported as one of the major sources of disagreement in human interobserver variability. In this work, we aim to investigate the performance of AI algorithms in segmenting basal and apical slices and design strategies to improve their segm…
