A descent of a labeled digraph is a directed edge (s, t) with s > t. We count strong tournaments, strong digraphs, and acyclic digraphs by descents and edges. To count strong tournaments we use Eulerian generating functions and to count strong and acyclic digraphs we use a new type of generating function that we call a graphic Eulerian generating function.
A descent of a labeled acyclic digraph is a directed edge $x\to y$ with $x>y$. In this paper, we find a recurrence for the number of labeled acyclic digraphs with a given number of descents.
Let $D=(V,A)$ be an acyclic digraph. For $x\in V$ define $e_{_{D}}(x)$ to be the difference of the indegree and the outdegree of $x$. An acyclic ordering of the vertices of $D$ is a one-to-one map $g: V \rightarrow [1,|V|] $ that has the property that for all $x,y\in V$ if $(x,y)\in A$, then $g(x) < g(y)$. We prove that for every acyclic ordering $g$ of $D$ the following inequality holds: \[\sum_{x\in V} e_{_{D}}(x)\cdot g(x) ~\geq~ \frac{1}{2} \sum_{x\in V}[e_{_{D}}(x)]^2~.\] The class of acyclic digraphs for which equality holds is determined as the class of comparbility digraphs of posets o…
I present an algorithm that, given a number $n \geq 1$, computes a compact representation of the set of all noncrossing acyclic digraphs with $n$ nodes. This compact representation can be used as the basis for a wide range of dynamic programming algorithms on these graphs. As an illustration, along with this note I am releasing the implementation of an algorithm for counting the number of noncrossing acyclic digraphs of a given size. The same tabulation can be modified to count other classes of combinatorial structures, including weakly connected noncrossing acyclic digraphs, general noncrossi…
We prove that for every digraph $D$ and every choice of positive integers $k$, $\ell$ there exists a digraph $D^*$ with girth at least $\ell$ together with a surjective acyclic homomorphism $ψ\colon D^*\to D$ such that: (i) for every digraph $C$ of order at most $k$, there exists an acyclic homomorphism $D^*\to C$ if and only if there exists an acyclic homomorphism $D\to C$; and (ii) for every $D$-pointed digraph $C$ of order at most $k$ and every acyclic homomorphism $φ\colon D^*\to C$ there exists a unique acyclic homomorphism $f\colon D\to C$ such that $φ=f\circψ$. This implies the main res…
We consider the extension to directed graphs of the concept of achromatic number in terms of acyclic vertex colorings. The achromatic number have been intensely studied since it was introduced by Harary, Hedetniemi and Prins in 1967. The dichromatic number is a generalization of the chromatic number for digraphs defined by Neumann-Lara in 1982. A coloring of a digraph is an acyclic coloring if each subdigraph induced by each chromatic class is acyclic, and a coloring is complete if for any pair of chromatic classes $x,y$, there is an arc from $x$ to $y$ and an arc from $y$ to $x$. The dichroma…
Hefner [K. A. S. Hefner, K. F. Jones, S. -R. Kim, R. J. Lundgren and F. S. Roberts: $(i,j)$ competition graphs, Discrete Applied Mathematics, 32, (1991) 241-262] characterized acyclic digraphs each vertex of which has inderee and outdegree at most two and whose competition graphs are interval. They called acyclic digraphs each vertex of which has inderee and outdegree at most two $(2,2)$ digraphs. In this paper, we study the phylogeny graphs of $(2,2)$ digraphs. Especially, we give a sufficient condition and necessary conditions for $(2,2)$ digraphs having chordal phylogeny graphs. Phylogeny g…
We consider acyclic r-colorings in graphs and digraphs: they color the vertices in r colors, each of which induces an acyclic graph or digraph. (This includes the dichromatic number of a digraph, and the arboricity of a graph.) For any girth and sufficiently high degree, we prove the NP-completeness of acyclic r-colorings; our method also implies the known analogue for classical colorings. The proofs use high girth graphs with high arboricity and dichromatic numbers. High girth graphs and digraphs with high chromatic and dichromatic numbers have been well studied; we re-derive the results from…
The dichromatic number of a digraph $G$ is the smallest integer $χ_a(G)$ such that the vertex set of $G$ can be partitioned into $χ_a(G)$ sets, each of which induces an acyclic subdigraph. This is a generalization of the classic chromatic number of graphs. Here, we investigate the dichromatic number of the cartesian, direct, strong and lexicographic products, giving generalizations of some classic results on the chromatic number of products. More specifically, we prove that the following inequalities, known to hold for the chromatic number of graphs, still hold for the dichromatic number of di…
Burr and Erdős in 1975 conjectured, and Chvátal, Rödl, Szemerédi and Trotter later proved, that the Ramsey number of any bounded degree graph is linear in the number of vertices. In this paper, we disprove the natural directed analogue of the Burr--Erdős conjecture, answering a question of Bucić, Letzter, and Sudakov. If $H$ is an acyclic digraph, the oriented Ramsey number of $H$, denoted $\overrightarrow{r_{1}}(H)$, is the least $N$ such that every tournament on $N$ vertices contains a copy of $H$. We show that for any $Δ\geq 2$ and any sufficiently large $n$, there exists an acyclic digraph…
An acyclic homomorphism of a digraph $C$ to a digraph $D$ is a function $ρ\colon V(C)\to V(D)$ such that for every arc $uv$ of $C$, either $ρ(u)=ρ(v)$, or $ρ(u)ρ(v)$ is an arc of $D$ and for every vertex $v\in V(D)$, the subdigraph of $C$ induced by $ρ^{-1}(v)$ is acyclic. A digraph $D$ is a core if the only acyclic homomorphisms of $D$ to itself are automorphisms. In this paper, we prove that for certain choices of $p(n)$, random digraphs $D\in D(n,p(n))$ are asymptotically almost surely cores. For digraphs, this mirrors a result from [A. Bonato and P. Prałat, The good, the bad, and the great…
Given a directed graph, an acyclic set is a set of vertices inducing a subgraph with no directed cycle. In this note we show that there exist oriented planar graphs of order $n$ for which the size of the maximum acyclic set is at most $\lceil \frac{n+1}{2} \rceil$, for any $n$. This disproves a conjecture of Harutyunyan and shows that a question of Albertson is best possible.
Directed acyclic graphs (DAGs) can be characterised as directed graphs whose strongly connected components are isolated vertices. Using this restriction on the strong components, we discover that when $m = cn$, where $m$ is the number of directed edges, $n$ is the number of vertices, and $c < 1$, the asymptotic probability that a random digraph is acyclic is an explicit function $p(c)$, such that $p(0) = 1$ and $p(1) = 0$. When $m = n(1 + μn^{-1/3})$, the asymptotic behaviour changes, and the probability that a digraph is acyclic becomes $n^{-1/3} C(μ)$, where $C(μ)$ is an explicit function of…
We investigate the complexity of generalizations of colourings (acyclic colourings, $(k,\ell)$-colourings, homomorphisms, and matrix partitions), for the class of transitive digraphs. Even though transitive digraphs are nicely structured, many problems are intractable, and their complexity turns out to be difficult to classify. We present some motivational results and several open problems.
Let $D$ be a digraph and let $λ(D)$ denote the number of vertices in a longest path of $D$. For a pair of vertex-disjoint induced subdigraphs $A$ and $B$ of $D$, we say that $(A,B)$ is a partition of $D$ if $V(A)\cup V(B)=V(D).$ The Path Partition Conjecture (PPC) states that for every digraph, $D$, and every integer $q$ with $1\leq q\leqλ(D)-1$, there exists a partition $(A,B)$ of $D$ such that $λ(A)\leq q$ and $λ(B)\leqλ(D)-q.$ Let $T$ be a digraph with vertex set $\{u_1,\dots, u_t\}$ and for every $i\in [t]$, let $H_i$ be a digraph with vertex set $\{u_{i,j_i}\colon\, j_i\in [n_i]\}$. The {…
The chromatic number of a digraph $D$ is the minimum number of acyclic subgraphs covering the vertex set of $D$. A tournament $H$ is a hero if every $H$-free tournament $T$ has chromatic number bounded by a function of $H$. Inspired by the celebrated Erdős--Hajnal conjecture, Berger et al. fully characterized the class of heroes in 2013. We extend this framework to dense digraphs: A digraph $H$ is a superhero if every $H$-free digraph $D$ has chromatic number bounded by a function of $H$ and $α(D)$, the independence number of the underlying graph of $D$. We prove here that a digraph is a super…
In 1982 Víctor Neumann-Lara introduced the dichromatic number of a digraph $D$ as the smallest integer $k$ such that the vertices $V$ of $D$ can be colored with $k$ colors and each color class induces an acyclic digraph. Later a flow theory for the dichromatic number transferring Tutte's theory of nowhere-zero flows (NZ-flows) from classic graph colorings has been developed by Hochstättler. The purpose of this paper is to pursue this analogy by introducing a new definition of algebraic Neumann-Lara-flows (NL-flows) and a closed formula for their polynomial. Furthermore we generalize the Equiva…
The \textit{acyclic disconnection} $\overrightarrow{ω}(D)$ (resp. the \textit{directed triangle free disconnection } $\overrightarrow{ω}_{3}(D)$) of a digraph $D$ is defined as the maximum possible number of connected components of the underlying graph of $D\setminus A(D^{\ast })$ where $D^{\ast }$ is an acyclic (resp. a directed triangle free) subdigraph of $D$. In this paper, we generalize some previous results and solve some problems posed by V. Neumann-Lara (The acyclic disconnection of a digraph, Discrete Math. 197/198 (1999), 617-632). Let $\overrightarrow{C}_{2n+1}(J)$ be a circulant to…
Let $T$ be a digraph with vertices $u_1, \dots, u_t$ ($t\ge 2$) and let $H_1, \dots, H_t$ be digraphs such that $H_i$ has vertices $u_{i,j_i},\ 1\le j_i\le n_i.$ Then the composition $Q=T[H_1, \dots, H_t]$ is a digraph with vertex set $\{u_{i,j_i}\colon\, 1\le i\le t, 1\le j_i\le n_i\}$ and arc set $$A(Q)=\cup^t_{i=1}A(H_i)\cup \{u_{ij_i}u_{pq_p}\colon\, u_iu_p\in A(T), 1\le j_i\le n_i, 1\le q_p\le n_p\}.$$ The composition $Q=T[H_1, \dots, H_t]$ is a semicomplete composition if $T$ is semicomplete, i.e. there is at least one arc between every pair of vertices. Digraph compositions generalize s…
In this paper, we compute competition indices and periods of multipartite tournaments. We first show that the competition period of an acyclic digraph $D$ is one and $ζ(D) +1$ is a sharp upper bound of the competition index of $D$ where $ζ(D)$ is the sink elimination index of $D$. Then we prove that, especially, for an acyclic $k$-partite tournament $D$, the competition index of $D$ is $ζ(D)$ or $ζ(D) +1$ for an integer $k \ge 3$. By developing useful tools to create infinitely many directed walks in a certain regular pattern from given directed walks, we show that the competition period of a …
Stanley defined the chromatic symmetric function of a graph, and Shareshian and Wachs introduced a refinement, namely the chromatic quasisymmetric function of a labeled graph. In this paper, we define the chromatic quasisymmetric function of a directed graph, which agrees with the Shareshian-Wachs definition in the acyclic case. We give an F-basis expansion for all digraphs in terms of a permutation statistic, which we call G-descents. We use this expansion to derive a p-positivity formula for all digraphs with symmetric chromatic quasisymmetric functions. We show that the chromatic quasisymme…
Let $G$ be a graph of order $n$. It is well-known that $α(G)\geq \sum_{i=1}^n \frac{1}{1+d_i}$, where $α(G)$ is the independence number of $G$ and $d_1,\ldots,d_n$ is the degree sequence of $G$. We extend this result to digraphs by showing that if $D$ is a digraph with $n$ vertices, then $ α(D)\geq \sum_{i=1}^n \left( \frac{1}{1+d_i^+} + \frac{1}{1+d_i^-} - \frac{1}{1+d_i}\right)$, where $α(D)$ is the maximum size of an acyclic vertex set of $D$. Golowich proved that for any digraph $D$, $χ(D)\leq \lceil \frac{4k}{5} \rceil+2$, where $k=max(Δ^+(D),Δ^-(D))$. We give a short and simple proof for…
Motivated by applications in cancer genomics and following the work of Hajirasouliha and Raphael (WABI 2014), Hujdurović et al. (IEEE TCBB, to appear) introduced the minimum conflict-free row split (MCRS) problem: split each row of a given binary matrix into a bitwise OR of a set of rows so that the resulting matrix corresponds to a perfect phylogeny and has the minimum possible number of rows among all matrices with this property. Hajirasouliha and Raphael also proposed the study of a similar problem, in which the task is to minimize the number of distinct rows of the resulting matrix. Hujdur…
In this paper we study irreducible representations and symbolic Rees algebras of monomial ideals. Then we examine edge ideals associated to vertex-weighted oriented graphs. These are digraphs having no oriented cycles of length two with weights on the vertices. For a monomial ideal with no embedded primes we classify the normality of its symbolic Rees algebra in terms of its primary components. If the primary components of a monomial ideal are normal, we present a simple procedure to compute its symbolic Rees algebra using Hilbert bases, and give necessary and sufficient conditions for the equ…