This short report describes our submission to the ISIC 2018 Challenge in Skin Lesion Analysis Towards Melanoma Detection for Task1 and Task 3. This work has been accomplished by a team of researchers at the University of Dayton Signal and Image Processing Lab. Our proposed approach is computationally efficient are combines information from both deep learning and handcrafted features. For Task3, we form a new type of image features, called hybrid features, which has stronger discrimination ability than single method features. These features are utilized as inputs to a decision-making model that is based on a multiclass Support Vector Machine (SVM) classifier. The proposed technique is evaluated on online validation databases. Our score was 0.841 with SVM classifier on the validation dataset.
This paper provides the required description of the methods used to obtain submitted results for Task1 and Task 3 of ISIC 2018: Skin Lesion Analysis Towards Melanoma Detection. The results have been created by a team of researchers at the University of Dayton Signal and Image Processing Lab. In this submission, traditional classifiers with hand-crafted features are utilized for Task 1 and Task 3. Our team is providing additional separate submissions using deep learning methods for comparison.
Hybrid Ensemble of Segmentation-Assisted Classification and GBDT for Skin Cancer Detection with Engineered Metadata and Synthetic Lesions from ISIC 2024 Non-Dermoscopic 3D-TBP Images
Skin lesions segmentation is an important step in the process of automated diagnosis of the skin melanoma. However, the accuracy of segmenting melanomas skin lesions is quite a challenging task due to less data for training, irregular shapes, unclear boundaries, and different skin colors. Our proposed approach helps in improving the accuracy of skin lesion segmentation. Firstly, we have introduced the coordinate convolutional layer before passing the input image into the encoder. This layer helps the network to decide on the features related to translation invariance which further improves the…
Manchester Metropolitan University（曼彻斯特城市大学）；University of Auckland（奥克兰大学）
Early detection of skin cancer, particularly melanoma, is crucial to enable advanced treatment. Due to the rapid growth in the numbers of skin cancers, there is a growing need of computerized analysis for skin lesions. The state-of-the-art public available datasets for skin lesions are often accompanied with very limited amount of segmentation ground truth labeling as it is laborious and expensive. The lesion boundary segmentation is vital to locate the lesion accurately in dermoscopic images and lesion diagnosis of different skin lesion types. In this work, we propose the use of fully automat…
Khulna University of Engineering & Technology（库尔纳工程技术大学）
Automated skin lesion analysis for simultaneous detection and recognition is still challenging for inter-class homogeneity and intra-class heterogeneity, leading to low generic capability of a Single Convolutional Neural Network (CNN) with limited datasets. This article proposes an end-to-end deep CNN-based framework for simultaneous detection and recognition of the skin lesions, named Dermo-DOCTOR, consisting of two encoders. The feature maps from two encoders are fused channel-wise, called Fused Feature Map (FFM). The FFM is utilized for decoding in the detection sub-network, concatenating e…
University of Dayton（代顿大学）；Christian Brothers University（基督教兄弟大学）
Accurate diagnostics of a skin lesion is a critical task in classification dermoscopic images. In this research, we form a new type of image features, called hybrid features, which has stronger discrimination ability than single method features. This study involves a new technique where we inject the handcrafted features or feature transfer into the fully connected layer of Convolutional Neural Network (CNN) model during the training process. Based on our literature review until now, no study has examined or investigated the impact on classification performance by injecting the handcrafted fea…
University of Girona（赫罗纳大学）；Université Clermont Auvergne（克莱蒙奥弗涅大学）
Automatic segmentation of skin lesion is considered a crucial step in Computer Aided Diagnosis (CAD) for melanoma diagnosis. Despite its significance, skin lesion segmentation remains a challenging task due to their diverse color, texture, and indistinguishable boundaries and forms an open problem. Through this study, we present a new and automatic semantic segmentation network for robust skin lesion segmentation named Dermoscopic Skin Network (DSNet). In order to reduce the number of parameters to make the network lightweight, we used depth-wise separable convolution in lieu of standard convo…
This project applies Mask R-CNN method to ISIC 2018 challenge tasks: lesion boundary segmentation (task1), lesion attributes detection (task 2), lesion diagnosis (task 3), a solution to the latter is using a trained model for task 1 and a simple voting procedure.
Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences（中国科学院深圳先进技术研究院）；University of Science and Technology of China（中国科学技术大学）
Skin lesion segmentation is an important step for automatic melanoma diagnosis. Due to the non-negligible diversity of lesions from different patients, extracting powerful context for fine-grained semantic segmentation is still challenging today. Although the deep convolutional neural network (CNNs) have made significant improvements on skin lesion segmentation, they often fail to reserve the spatial details and long-range dependencies context due to consecutive convolution striding and pooling operations inside CNNs. In this paper, we formulate a cascaded context enhancement neural network fo…
TAFM-Net: A Novel Approach to Skin Lesion Segmentation Using Transformer Attention and Focal Modulation
School of Computer Science and Engineering, UNSW（新南威尔士大学计算机科学与工程学院）；Abasyn University Islamabad Campus（阿巴辛大学伊斯兰堡校区）；School of Computer Science（计算机学院）；Department of Computing, Abasyn University Islamabad Campus（阿巴辛大学伊斯兰堡校区计算机系）
Indian Institute of Technology Jodhpur（印度理工学院焦特布尔分校）
Melanoma is a life-threatening form of skin cancer when left undiagnosed at the early stages. Although there are more cases of non-melanoma cancer than melanoma cancer, melanoma cancer is more deadly. Early detection of melanoma is crucial for the timely diagnosis of melanoma cancer and prohibit its spread to distant body parts. Segmentation of skin lesion is a crucial step in the classification of melanoma cancer from the cancerous lesions in dermoscopic images. Manual segmentation of dermoscopic skin images is very time consuming and error-prone resulting in an urgent need for an intelligent…
The accurate detection of lesion attributes is meaningful for both the computeraid diagnosis system and dermatologists decisions. However, unlike lesion segmentation and melenoma classification, there are few deep learning methods and literatures focusing on this task. Currently, the lesion attribute detection still remains challenging due to the extremely unbalanced class distribution and insufficient samples, as well as large intraclass and low interclass variations. To solve these problems, we propose a deep learning framework named superpixel attention network (SANet). Firstly, we segment …
This paper reports the methods and techniques we have developed for classify dermoscopic images (task 1) of the ISIC 2019 challenge dataset for skin lesion classification, our approach aims to use ensemble deep neural network with some powerful techniques to deal with unbalance data sets as its the main problem for this challenge in a move to increase the performance of CNNs model.
UCM-Net: A Lightweight and Efficient Solution for Skin Lesion Segmentation using MLP and CNN
The Graduate Center, City University of New York（纽约城市大学研究生中心）；University of Washington（华盛顿大学）；College of Staten Island, City University of New York（纽约城市大学斯塔滕岛学院）
SkinMamba: A Precision Skin Lesion Segmentation Architecture with Cross-Scale Global State Modeling and Frequency Boundary Guidance
College of Artificial Intelligence, Nanjing Agricultural University（南京农业大学人工智能学院）；State Key Laboratory for Novel Software Technology, Nanjing University（南京大学计算机软件新技术国家重点实验室）
Convolutional Neural Networks have demonstrated human-level performance in the classification of melanoma and other skin lesions, but evident performance disparities between differing skin tones should be addressed before widespread deployment. In this work, we propose an efficient yet effective algorithm for automatically labelling the skin tone of lesion images, and use this to annotate the benchmark ISIC dataset. We subsequently use these automated labels as the target for two leading bias unlearning techniques towards mitigating skin tone bias. Our experimental results provide evidence tha…
German Research Center for Artificial Intelligence（德国人工智能研究中心）
A shortage of dermatologists causes long wait times for patients who seek dermatologic care. In addition, the diagnostic accuracy of general practitioners has been reported to be lower than the accuracy of artificial intelligence software. This article describes the Skincare project (H2020, EIT Digital). Contributions include enabling technology for clinical decision support based on interactive machine learning (IML), a reference architecture towards a Digital European Healthcare Infrastructure (also cf. EIT MCPS), technical components for aggregating digitised patient information, and the in…
The segmentation of skin lesions is a crucial task in clinical decision support systems for the computer aided diagnosis of skin lesions. Although deep learning-based approaches have improved segmentation performance, these models are often susceptible to class imbalance in the data, particularly, the fraction of the image occupied by the background healthy skin. Despite variations of the popular Dice loss function being proposed to tackle the class imbalance problem, the Dice loss formulation does not penalize misclassifications of the background pixels. We propose a novel metric-based loss f…
Microsoft（微软）；Cupertino High School（库比蒂诺高中）；Inglemoor High School（英格尔穆尔高中）
All datasets contain some biases, often unintentional, due to how they were acquired and annotated. These biases distort machine-learning models' performance, creating spurious correlations that the models can unfairly exploit, or, contrarily destroying clear correlations that the models could learn. With the popularity of deep learning models, automated skin lesion analysis is starting to play an essential role in the early detection of Melanoma. The ISIC Archive is one of the most used skin lesion sources to benchmark deep learning-based tools. Bissoto et al. experimented with different boun…
Recently, some pioneering works have preferred applying more complex modules to improve segmentation performances. However, it is not friendly for actual clinical environments due to limited computing resources. To address this challenge, we propose a light-weight model to achieve competitive performances for skin lesion segmentation at the lowest cost of parameters and computational complexity so far. Briefly, we propose four modules: (1) DGA consists of dilated convolution and gated attention mechanisms to extract global and local feature information; (2) IEA, which is based on external atte…
Vellore Institute of Technology（韦洛尔理工学院）；V R Siddhartha Engineering College（V R悉达多工程学院）
Segmenting skin lesions from dermoscopic images is essential for diagnosing skin cancer. But the automatic segmentation of these lesions is complicated due to the poor contrast between the background and the lesion, image artifacts, and unclear lesion boundaries. In this work, we present a deep learning model for the segmentation of skin lesions from dermoscopic images. To deal with the challenges of skin lesion characteristics, we designed a multi-scale feature extraction module for extracting the discriminative features. Further in this work, two attention mechanisms are developed to refine …
Tsinghua University Shenzhen International Graduate School（清华大学深圳国际研究生院）
Lesion segmentation requires both speed and accuracy. In this paper, we propose a simple yet efficient network DSNet, which consists of a encoder based on Transformer and a convolutional neural network(CNN)-based distinct pyramid decoder containing three dual-stream attention (DSA) modules. Specifically, the DSA module fuses features from two adjacent levels through the false positive stream attention (FPSA) branch and the false negative stream attention (FNSA) branch to obtain features with diversified contextual information. We compare our method with various state-of-the-art (SOTA) lesion s…
This work is about the semantic segmentation of skin lesion boundary and their attributes using Image-to-Image Translation with Conditional Adversarial Nets. Melanoma is a type of skin cancer that can be cured if detected in time. Segmentation into dermoscopic images is an essential procedure for computer-assisted diagnosis due to its existing artifacts typical of skin images. To alleviate the image annotation process, we propose to use a modified Pix2Pix network. The discriminator network learns the mapping from a dermal image as an input and a mask image of six channels as an output. Likewis…
Imsight Medical Technology Co., Ltd.（深圳市智视医疗科技有限公司）；The Chinese University of Hong Kong（香港中文大学）；The Hong Kong Polytechnic University（香港理工大学）；Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences（中国科学院深圳先进技术研究院）；Imperial College London（帝国理工学院）
Automated skin lesion analysis is very crucial in clinical practice, as skin cancer is among the most common human malignancy. Existing approaches with deep learning have achieved remarkable performance on this challenging task, however, heavily relying on large-scale labelled datasets. In this paper, we present a novel active learning framework for cost-effective skin lesion analysis. The goal is to effectively select and utilize much fewer labelled samples, while the network can still achieve state-of-the-art performance. Our sample selection criteria complementarily consider both informativ…
Skin lesion segmentation is a vital task in skin cancer diagnosis and further treatment. Although deep learning based approaches have significantly improved the segmentation accuracy, these algorithms are still reliant on having a large enough dataset in order to achieve adequate results. Inspired by the immense success of generative adversarial networks (GANs), we propose a GAN-based augmentation of the original dataset in order to improve the segmentation performance. In particular, we use the segmentation masks available in the training dataset to train the Mask2Lesion model, and use the mo…
School of Computer Science, Fudan University（复旦大学计算机科学学院）；Johns Hopkins University（约翰斯·霍普金斯大学）
Recent advances in automated skin cancer diagnosis have yielded performance on par with board-certified dermatologists. However, these approaches formulated skin cancer diagnosis as a simple classification task, dismissing the potential benefit from lesion segmentation. We argue that an accurate lesion segmentation can supplement the classification task with additive lesion information, such as asymmetry, border, intensity, and physical size; in turn, a faithful lesion classification can support the segmentation task with discriminant lesion features. To this end, this paper proposes a new mul…
FH Joanneum University of Applied Sciences（约阿内姆应用科学大学）
Skin cancer is the most common cancer worldwide, with melanoma being the deadliest form. Dermoscopy is a skin imaging modality that has shown an improvement in the diagnosis of skin cancer compared to visual examination without support. We evaluate the current state of the art in the classification of dermoscopic images based on the ISIC-2019 Challenge for the classification of skin lesions and current literature. Various deep neural network architectures pre-trained on the ImageNet data set are adapted to a combined training data set comprised of publicly available dermoscopic and clinical im…
Department of CS & IT, SUIT Peshawar（白沙瓦SUIT计算机科学与信息技术系）
Skin lesion segmentation can be rather a challenging task owing to the presence of artifacts, low contrast between lesion and boundary, color variegation, fuzzy skin lesion borders and heterogeneous background in dermoscopy images. In this paper, we propose a simple yet effective saliency-based approach derived in the frequency and spatial domain to detect pigmented skin lesion. Two color models are utilized for the construction of these maps. We suggest a different metric for each color model to design map in the spatial domain via color features. The map in the frequency domain is generated …
Convolutional neural networks (CNNs) have achieved the state-of-the-art performance in skin lesion analysis. Compared with single CNN classifier, combining the results of multiple classifiers via fusion approaches shows to be more effective and robust. Since the skin lesion datasets are usually limited and statistically biased, while designing an effective fusion approach, it is important to consider not only the performance of each classifier on the training/validation dataset, but also the relative discriminative power (e.g., confidence) of each classifier regarding an individual sample in t…
K N Toosi University of Technology（K N Toosi工业大学）；University of Tehran（德黑兰大学）；Amirkabir University of Technology（Amirkabir工业大学）；Uniklinik RWTH Aachen（亚琛工业大学医院）
According to WHO[1], since the 1970s, diagnosis of melanoma skin cancer has been more frequent. However, if detected early, the 5-year survival rate for melanoma can increase to 99 percent. In this regard, skin lesion segmentation can be pivotal in monitoring and treatment planning. In this work, ten models and four augmentation configurations are trained on the ISIC 2016 dataset. The performance and overfitting are compared utilizing five metrics. Our results show that the U-Net-Resnet50 and the R2U-Net have the highest metrics value, along with two data augmentation scenarios. We also invest…
Hospital Clínic Barcelona, Universitat de Barcelona, IDIBAPS（巴塞罗那临床医院，巴塞罗那大学，IDIBAPS）；IBM Research AI, T J Watson Research Center（IBM研究AI，T J Watson研究中心）；Dermatology Service, Department of Medicine, Memorial Sloan Kettering Cancer Center（医学部皮肤科，纪念斯隆-凯特琳癌症中心）；Kitware；Signal Theory and Communications, Universitat Politècnica de Catalunya（信号理论与通信，加泰罗尼亚理工大学）；Melanoma Unit, Dermatology Department, Hospital Clínic Barcelona, Universitat de Barcelona, IDIBAPS（黑素瘤科，皮肤科，巴塞罗那临床医院，巴塞罗那大学，IDIBAPS）
This article summarizes the BCN20000 dataset, composed of 19424 dermoscopic images of skin lesions captured from 2010 to 2016 in the facilities of the Hospital Clínic in Barcelona. With this dataset, we aim to study the problem of unconstrained classification of dermoscopic images of skin cancer, including lesions found in hard-to-diagnose locations (nails and mucosa), large lesions which do not fit in the aperture of the dermoscopy device, and hypo-pigmented lesions. The BCN20000 will be provided to the participants of the ISIC Challenge 2019, where they will be asked to train algorithms to c…
Exploiting learning algorithms under scarce data regimes is a limitation and a reality of the medical imaging field. In an attempt to mitigate the problem, we propose a data augmentation protocol based on generative adversarial networks. We condition the networks at a pixel-level (segmentation mask) and at a global-level information (acquisition environment or lesion type). Such conditioning provides immediate access to the image-label pairs while controlling global class specific appearance of the synthesized images. To stimulate synthesis of the features relevant for the segmentation task, a…
Segmentation is essential for medical image analysis to identify and localize diseases, monitor morphological changes, and extract discriminative features for further diagnosis. Skin cancer is one of the most common types of cancer globally, and its early diagnosis is pivotal for the complete elimination of malignant tumors from the body. This research develops an Artificial Intelligence (AI) framework for supervised skin lesion segmentation employing the deep learning approach. The proposed framework, called MFSNet (Multi-Focus Segmentation Network), uses differently scaled feature maps for c…
Central Electronics Engineering Research Institute, CSIR Madras Complex（CSIR马德拉斯综合体中央电子工程研究所）；University of Bridgeport（桥港大学）
Image segmentation and classification are the two main fundamental steps in pattern recognition. To perform medical image segmentation or classification with deep learning models, it requires training on large image dataset with annotation. The dermoscopy images (ISIC archive) considered for this work does not have ground truth information for lesion segmentation. Performing manual labelling on this dataset is time-consuming. To overcome this issue, self-learning annotation scheme was proposed in the two-stage deep learning algorithm. The two-stage deep learning algorithm consists of U-Net seg…
Tarbiat Modares University（塔比亚特莫达雷斯大学）；Islamic Azad University Science and Research Branch（伊斯兰阿扎德大学科学与研究分校）
At present, cancer is one of the most important health issues in the world. Because early detection and appropriate treatment in cancer are very effective in the recovery and survival of patients, image processing as a diagnostic tool can help doctors to diagnose in the first recognition of cancer. One of the most important steps in diagnosing a skin lesion is to automatically detect the border of the skin image because the accuracy of the next steps depends on it. If these subtleties are identified, they can have a great impact on the diagnosis of the disease. Therefore, there is a good oppor…
Medical image segmentation annotations suffer from inter- and intra-observer variations even among experts due to intrinsic differences in human annotators and ambiguous boundaries. Leveraging a collection of annotators' opinions for an image is an interesting way of estimating a gold standard. Although training deep models in a supervised setting with a single annotation per image has been extensively studied, generalizing their training to work with datasets containing multiple annotations per image remains a fairly unexplored problem. In this paper, we propose an approach to handle annotato…
Deep Neural Networks (DNNs) show a significant impact on medical imaging. One significant problem with adopting DNNs for skin cancer classification is that the class frequencies in the existing datasets are imbalanced. This problem hinders the training of robust and well-generalizing models. Data Augmentation addresses this by using existing data more effectively. However, standard data augmentation implementations are manually designed and produce only limited reasonably alternative data. Instead, Generative Adversarial Networks (GANs) is utilized to generate a much broader set of augmentatio…
University of Illinois at Urbana-Champaign（伊利诺伊大学厄巴纳-香槟分校）；Novartis Pharmaceuticals（诺华制药）；University of California, Irvine（加州大学欧文分校）；Wolfram Research（沃尔夫勒姆研究公司）
Skin cancer, the most commonly found human malignancy, is primarily diagnosed visually via dermoscopic analysis, biopsy, and histopathological examination. However, unlike other types of cancer, automated image classification of skin lesions is deemed more challenging due to the irregularity and variability in the lesions' appearances. In this work, we propose an adaptation of the Neural Style Transfer (NST) as a novel image pre-processing step for skin lesion classification problems. We represent each dermoscopic image as the style image and transfer the style of the lesion onto a homogeneous…
SLP-Net:An efficient lightweight network for segmentation of skin lesions
School of Computer and Software Engineering, Xihua University（西华大学计算机与软件工程学院）；School of Electrical Engineering and Electronic Information, Xihua University（西华大学电气工程与电子信息学院）；School of Computer Science, Nanjing University of Posts and Telecommunications（南京邮电大学计算机学院）
University of Technology Sydney（悉尼科技大学）；Zhibian Technology Co. Ltd.（智变科技有限公司）
Skin lesion segmentation is a crucial step in the computer-aided diagnosis of dermoscopic images. In the last few years, deep learning based semantic segmentation methods have significantly advanced the skin lesion segmentation results. However, the current performance is still unsatisfactory due to some challenging factors such as large variety of lesion scale and ambiguous difference between lesion region and background. In this paper, we propose a simple yet effective framework, named Dual Objective Networks (DONet), to improve the skin lesion segmentation. Our DONet adopts two symmetric de…
Melanoma is one of the most serious skin cancers that can occur in any part of the human skin. Early diagnosis of melanoma lesions will significantly increase their chances of being cured. Improving melanoma segmentation will help doctors or surgical robots remove the lesion more accurately from body parts. Recently, the learning-based segmentation methods achieved desired results in image segmentation compared to traditional algorithms. This study proposes a new approach to improve melanoma skin lesions detection and segmentation by defining a two-step pipeline based on deep learning models. …
Fontys University of Applied Science（方提斯应用科学大学）；Eindhoven University of Technology（埃因霍温理工大学）；Middle East Technical University（中东技术大学）
Machine learning has a recognised need for large amounts of annotated data. Due to the high cost of expert annotations, crowdsourcing, where non-experts are asked to label or outline images, has been proposed as an alternative. Although many promising results are reported, the quality of diagnostic crowdsourced labels is still unclear. We propose to address this by instead asking the crowd about visual features of the images, which can be provided more intuitively, and by using these features in a multi-task learning framework through ensemble strategies. We compare our proposed approach to a …
SliceMamba with Neural Architecture Search for Medical Image Segmentation
School of Computer Science, Beijing University of Technology（北京工业大学计算机科学学院）；Xiaomi Inc（小米公司）；Department of Radiology, Capital Medical University Affiliated Beijing Friendship Hospital（首都医科大学附属北京友谊医院放射科）；New Laboratory of Pattern Recognition, Institute of Automation, Chinese Academy of Sciences（中国科学院自动化研究所模式识别新实验室）
Deeply Supervised Skin Lesions Diagnosis with Stage and Branch Attention
City University of Hong Kong（香港城市大学）；Beijing University of Posts and Telecommunications（北京邮电大学）；Shenzhen Research Institute, City University of Hong Kong（香港城市大学深圳研究院）
MUCM-Net: A Mamba Powered UCM-Net for Skin Lesion Segmentation
The Graduate Center, City University of New York（纽约城市大学研究生中心）；University of Washington（华盛顿大学）；College of Staten Island, City University of New York（纽约城市大学斯塔滕岛学院）
Malignant melanoma is a common skin cancer that is mostly curable before metastasis -when growths spawn in organs away from the original site. Melanoma is the most dangerous type of skin cancer if left untreated due to the high risk of metastasis. This paper presents Melatect, a machine learning (ML) model embedded in an iOS app that identifies potential malignant melanoma. Melatect accurately classifies lesions as malignant or benign over 96.6% of the time with no apparent bias or overfitting. Using the Melatect app, users have the ability to take pictures of skin lesions (moles) and subseque…
Gdańsk University of Technology（格但斯克工业大学）；Sahlgrenska University Hospital（萨尔格伦斯卡大学医院）；AI Sweden（瑞典人工智能研究院）
New medical datasets are now more open to the public, allowing for better and more extensive research. Although prepared with the utmost care, new datasets might still be a source of spurious correlations that affect the learning process. Moreover, data collections are usually not large enough and are often unbalanced. One approach to alleviate the data imbalance is using data augmentation with Generative Adversarial Networks (GANs) to extend the dataset with high-quality images. GANs are usually trained on the same biased datasets as the target data, resulting in more biased instances. This w…
