The bridge regression estimator generalizes both ridge regression and LASSO estimators. Since it minimizes the sum of squared residuals with a $L_{γ}$ penalty, this estimator is typically not robust against outliers in the data. There have been attempts to define robust versions of the bridge regression method, but while these proposed methods produce bridge regression estimators robust to outliers and heavy-tailed errors, they are not robust against leverage points. We propose a robust bridge regression estimation method combining MM and bridge regression estimation methods. The MM bridge regression estimator obtained from the proposed method is robust against outliers and leverage points. Furthermore, for appropriate choices of the penalty function, the proposed method is able to perform variable selection and parameter estimation simultaneously. Consistency, asymptotic normality, and sparsity of the MM bridge regression estimator are achieved. We propose an algorithm to compute the MM bridge regression estimate. A simulation study and a real data example are provided to demonstrate the performance of the MM bridge regression estimator for finite sample cases.
Large-scale {\it in vitro} drug sensitivity screens are an important tool in personalized oncology to predict the effectiveness of potential cancer drugs. The prediction of the sensitivity of cancer cell lines to a panel of drugs is a multivariate regression problem with high-dimensional heterogeneous multi-omics data as input data and with potentially strong correlations between the outcome variables which represent the sensitivity to the different drugs. We propose a joint penalized regression approach with structured penalty terms which allow us to utilize the correlation structure between …
P-splines are penalized B-splines, in which finite order differences in coefficients are typically penalized with an $\ell_2$ norm. P-splines can be used for semiparametric regression and can include random effects to account for within-subject variability. In addition to $\ell_2$ penalties, $\ell_1$-type penalties have been used in nonparametric and semiparametric regression to achieve greater flexibility, such as in locally adaptive regression splines, $\ell_1$ trend filtering, and the fused lasso additive model. However, there has been less focus on using $\ell_1$ penalties in P-splines, pa…
Penalized likelihood methods with an $\ell_γ$-type penalty, such as the Bridge, the SCAD, and the MCP, allow us to estimate a parameter and to do variable selection, simultaneously, if $γ\in (0,1]$. In this method, it is important to choose a tuning parameter which controls the penalty level, since we can select the model as we want when we choose it arbitrarily. Nowadays, several information criteria have been developed to choose the tuning parameter without such an arbitrariness. However the bias correction term of such information criteria depend on the true parameter value in general, then…
Sparse covariates are frequent in classification and regression problems and in these settings the task of variable selection is usually of interest. As it is well known, sparse statistical models correspond to situations where there are only a small number of non--zero parameters and for that reason, they are much easier to interpret than dense ones. In this paper, we focus on the logistic regression model and our aim is to address robust and penalized estimation for the regression parameter. We introduce a family of penalized weighted $M-$type estimators for the logistic regression parameter…
Establishing a low-dimensional representation of the data leads to efficient data learning strategies. In many cases, the reduced dimension needs to be explicitly stated and estimated from the data. We explore the estimation of dimension in finite samples as a constrained optimization problem, where the estimated dimension is a maximizer of a penalized profile likelihood criterion within the framework of a probabilistic principal components analysis. Unlike other penalized maximization problems that require an "optimal" penalty tuning parameter, we propose a data-averaging procedure whereby th…
In high-dimensional model selection problems, penalized simple least-square approaches have been extensively used. This paper addresses the question of both robustness and efficiency of penalized model selection methods, and proposes a data-driven weighted linear combination of convex loss functions, together with weighted $L_1$-penalty. It is completely data-adaptive and does not require prior knowledge of the error distribution. The weighted $L_1$-penalty is used both to ensure the convexity of the penalty term and to ameliorate the bias caused by the $L_1$-penalty. In the setting with dimen…
We describe a simple, efficient, permutation based procedure for selecting the penalty parameter in the LASSO. The procedure, which is intended for applications where variable selection is the primary focus, can be applied in a variety of structural settings, including generalized linear models. We briefly discuss connections between permutation selection and existing theory for the LASSO. In addition, we present a simulation study and an analysis of three real data sets in which permutation selection is compared with cross-validation (CV), the Bayesian information criterion (BIC), and a selec…
In a Gaussian graphical model, the conditional independence between two variables are characterized by the corresponding zero entries in the inverse covariance matrix. Maximum likelihood method using the smoothly clipped absolute deviation (SCAD) penalty (Fan and Li, 2001) and the adaptive LASSO penalty (Zou, 2006) have been proposed in literature. In this article, we establish the result that using Bayesian information criterion (BIC) to select the tuning parameter in penalized likelihood estimation with both types of penalties can lead to consistent graphical model selection. We compare the …
Penalized likelihood methods are fundamental to ultra-high dimensional variable selection. How high dimensionality such methods can handle remains largely unknown. In this paper, we show that in the context of generalized linear models, such methods possess model selection consistency with oracle properties even for dimensionality of Non-Polynomial (NP) order of sample size, for a class of penalized likelihood approaches using folded-concave penalty functions, which were introduced to ameliorate the bias problems of convex penalty functions. This fills a long-standing gap in the literature whe…
Support vector machines (SVMs) with sparsity-inducing nonconvex penalties have received considerable attentions for the characteristics of automatic classification and variable selection. However, it is quite challenging to solve the nonconvex penalized SVMs due to their nondifferentiability, nonsmoothness and nonconvexity. In this paper, we propose an efficient ADMM-based algorithm to the nonconvex penalized SVMs. The proposed algorithm covers a large class of commonly used nonconvex regularization terms including the smooth clipped absolute deviation (SCAD) penalty, minimax concave penalty (…
For some special data in reality, such as the genetic data, adjacent genes may have the similar function. Thus ensuring the smoothness between adjacent genes is highly necessary. But, in this case, the standard lasso penalty just doesn't seem appropriate anymore. On the other hand, in high-dimensional statistics, some datasets are easily contaminated by outliers or contain variables with heavy-tailed distributions, which makes many conventional methods inadequate. To address both issues, in this paper, we propose an adaptive Huber regression for robust estimation and inference, in which, the f…
This paper considers the penalized least squares estimator with arbitrary convex penalty. When the observation noise is Gaussian, we show that the prediction error is a subgaussian random variable concentrated around its median. We apply this concentration property to derive sharp oracle inequalities for the prediction error of the LASSO, the group LASSO and the SLOPE estimators, both in probability and in expectation. In contrast to the previous work on the LASSO type methods, our oracle inequalities in probability are obtained at any confidence level for estimators with tuning parameters tha…
The Lasso is biased. Concave penalized least squares estimation (PLSE) takes advantage of signal strength to reduce this bias, leading to sharper error bounds in prediction, coefficient estimation and variable selection. For prediction and estimation, the bias of the Lasso can be also reduced by taking a smaller penalty level than what selection consistency requires, but such smaller penalty level depends on the sparsity of the true coefficient vector. The sorted L1 penalized estimation (Slope) was proposed for adaptation to such smaller penalty levels. However, the advantages of concave PLSE …
This paper proposes a penalized composite likelihood method for model selection in colored graphical Gaussian models. The method provides a sparse and symmetry-constrained estimator of the precision matrix, and thus conducts model selection and precision matrix estimation simultaneously. In particular, the method uses penalty terms to constrain the elements of the precision matrix, which enables us to transform the model selection problem into a constrained optimization problem. Further, computer experiments are conducted to illustrate the performance of the proposed new methodology. It is sho…
Biological networks often change under different environmental and genetic conditions. Understanding how these networks change becomes an important problem in biological studies. In this paper, we model the network change as the difference of two precision matrices and propose a novel loss function for estimating the precision matrix difference. Under a new irrepresentability condition, we show that the new loss function with the lasso penalty can give consistent estimates in high-dimensional setting for sub-Gaussian and polynomial-tailed distributions. An efficient algorithm is developed base…
Functional binary datasets occur frequently in real practice, whereas discrete characteristics of the data can bring challenges to model estimation. In this paper, we propose a sparse logistic functional principal component analysis (SLFPCA) method to handle the functional binary data. The SLFPCA looks for local sparsity of the eigenfunctions to obtain convenience in interpretation. We formulate the problem through a penalized Bernoulli likelihood with both roughness penalty and sparseness penalty terms. An efficient algorithm is developed for the optimization of the penalized likelihood using…
We propose MC+, a fast, continuous, nearly unbiased and accurate method of penalized variable selection in high-dimensional linear regression. The LASSO is fast and continuous, but biased. The bias of the LASSO may prevent consistent variable selection. Subset selection is unbiased but computationally costly. The MC+ has two elements: a minimax concave penalty (MCP) and a penalized linear unbiased selection (PLUS) algorithm. The MCP provides the convexity of the penalized loss in sparse regions to the greatest extent given certain thresholds for variable selection and unbiasedness. The PLUS co…
School of Mathematical Sciences, Fudan University（复旦大学数学科学学院）；Department of Statistics, Columbia University（哥伦比亚大学统计学系）
In high-dimensional data analysis, penalized likelihood estimators are shown to provide superior results in both variable selection and parameter estimation. A new algorithm, APPLE, is proposed for calculating the Approximate Path for Penalized Likelihood Estimators. Both the convex penalty (such as LASSO) and the nonconvex penalty (such as SCAD and MCP) cases are considered. The APPLE efficiently computes the solution path for the penalized likelihood estimator using a hybrid of the modified predictor-corrector method and the coordinate-descent algorithm. APPLE is compared with several well-k…
We construct an objective function that consists of a quadratic approximation term and a penalty term. Thanks to the quadratic approximation, we can deal with various kinds of loss functions into a unified way, and by taking advantage of the penalty term, we can simultaneously execute variable selection and parameter estimation. In this article, we show that our estimator has oracle properties, and even better property. We also treat an stochastic processes as applications.
We propose a new algorithm for sparse estimation of eigenvectors in generalized eigenvalue problems (GEP). The GEP arises in a number of modern data-analytic situations and statistical methods, including principal component analysis (PCA), multiclass linear discriminant analysis (LDA), canonical correlation analysis (CCA), sufficient dimension reduction (SDR) and invariant co-ordinate selection. We propose to modify the standard generalized orthogonal iteration with a sparsity-inducing penalty for the eigenvectors. To achieve this goal, we generalize the equation-solving step of orthogonal ite…
In recent years, there has been considerable theoretical development regarding variable selection consistency of penalized regression techniques, such as the lasso. However, there has been relatively little work on quantifying the uncertainty in these selection procedures. In this paper, we propose a new method for inference in high dimensions using a score test based on penalized regression. In this test, we perform penalized regression of an outcome on all but a single feature, and test for correlation of the residuals with the held-out feature. This procedure is applied to each feature in t…
This paper introduces an estimator of the relative directed distance between an estimated model and the true model, based on the Kulback-Leibler divergence and is motivated by the generalized information criterion proposed by Konishi and Kitagawa. This estimator can be used to select model in penalized Gaussian copula graphical models. The use of this estimator is not feasible for high-dimensional cases. However, we derive an efficient way to compute this estimator which is feasible for the latter class of problems. Moreover, this estimator is, generally, appropriate for several penalties such…
High-dimensional regression and regression with a left-censored response are each well-studied topics. In spite of this, few methods have been proposed which deal with both of these complications simultaneously. The Tobit model -- long the standard method for censored regression in economics -- has not been adapted for high-dimensional regression at all. To fill this gap and bring up-to-date techniques from high-dimensional statistics to the field of high-dimensional left-censored regression, we propose several penalized Tobit models. We develop a fast algorithm which combines quadratic minimi…
We propose a sparse regression method based on the non-concave penalized density power divergence loss function which is robust against infinitesimal contamination in very high dimensionality. Present methods of sparse and robust regression are based on $\ell_1$-penalization, and their theoretical properties are not well-investigated. In contrast, we use a general class of folded concave penalties that ensure sparse recovery and consistent estimation of regression coefficients. We propose an alternating algorithm based on the Concave-Convex procedure to obtain our estimate, and demonstrate its…
We study the Cox models with semiparametric relative risk, which can be partially linear with one nonparametric component, or multiple additive or nonadditive nonparametric components. A penalized partial likelihood procedure is proposed to simultaneously estimate the parameters and select variables for both the parametric and the nonparametric parts. Two penalties are applied sequentially. The first penalty, governing the smoothness of the multivariate nonlinear covariate effect function, provides a smoothing spline ANOVA framework that is exploited to derive an empirical model selection tool…
We investigate the difference between using an $\ell_1$ penalty versus an $\ell_1$ constraint in generalized eigenvalue problems, such as principal component analysis and discriminant analysis. Our main finding is that an $\ell_1$ penalty may fail to provide very sparse solutions; a severe disadvantage for variable selection that can be remedied by using an $\ell_1$ constraint. Our claims are supported both by empirical evidence and theoretical analysis. Finally, we illustrate the advantages of an $\ell_1$ constraint in the context of discriminant analysis and principal component analysis.
A number of variable selection methods have been proposed involving nonconvex penalty functions. These methods, which include the smoothly clipped absolute deviation (SCAD) penalty and the minimax concave penalty (MCP), have been demonstrated to have attractive theoretical properties, but model fitting is not a straightforward task, and the resulting solutions may be unstable. Here, we demonstrate the potential of coordinate descent algorithms for fitting these models, establishing theoretical convergence properties and demonstrating that they are significantly faster than competing approaches…
In this paper, we aim to give a theoretical approximation for the penalty level of $\ell_{1}$-regularization problems. This can save much time in practice compared with the traditional methods, such as cross-validation. To achieve this goal, we develop two Gaussian approximation methods, which are based on a moderate deviation theorem and Stein's method respectively. Both of them give efficient approximations and have good performances in simulations. We apply the two Gaussian approximation methods into three types of ultra-high dimensional $\ell_{1}$ penalized regressions: lasso, square-root …
Imposition of a lasso penalty shrinks parameter estimates toward zero and performs continuous model selection. Lasso penalized regression is capable of handling linear regression problems where the number of predictors far exceeds the number of cases. This paper tests two exceptionally fast algorithms for estimating regression coefficients with a lasso penalty. The previously known $\ell_2$ algorithm is based on cyclic coordinate descent. Our new $\ell_1$ algorithm is based on greedy coordinate descent and Edgeworth's algorithm for ordinary $\ell_1$ regression. Each algorithm relies on a tunin…
Penalized methods are applied to quasi likelihood analysis for stochastic differential equation models. In this paper, we treat the quasi likelihood function and the associated statistical random field for which a polynomial type large deviation inequality holds. Then penalty terms do not disturb a polynomial type large deviation inequality. This property ensures the convergence of moments of the associated estimator which plays an important role to evaluate the upper bound of the probability that model selection is incorrect.
The paper deals with generalized functional regression. The aim is to estimate the influence of covariates on observations, drawn from an exponential distribution. The link considered has a semiparametric expression: if we are interested in a functional influence of some covariates, we authorize others to be modeled linearly. We thus consider a generalized partially linear regression model with unknown regression coefficients and an unknown nonparametric function. We present a maximum penalized likelihood procedure to estimate the components of the model introducing penalty based wavelet estim…
Non linear mixed effect models are classical tools to analyze non linear longitudinal data in many fields such as population Pharmacokinetic. Groups of observations are usually compared by introducing the group affiliations as binary covariates with a reference group that is stated among the groups. This approach is relatively limited as it allows only the comparison of the reference group to the others. In this work, we propose to compare the groups using a penalized likelihood approach. Groups are described by the same structural model but with parameters that are group specific. The likelih…
A new method is proposed for variable screening, variable selection and prediction in linear regression problems where the number of predictors can be much larger than the number of observations. The method involves minimizing a penalized Euclidean distance, where the penalty is the geometric mean of the $\ell_1$ and $\ell_2$ norms of the regression coefficients. This particular formulation exhibits a grouping effect, which is useful for screening out predictors in higher or ultra-high dimensional problems. Also, an important result is a signal recovery theorem, which does not require an estim…
Fan and Li propose a family of variable selection methods via penalized likelihood using concave penalty functions. The nonconcave penalized likelihood estimators enjoy the oracle properties, but maximizing the penalized likelihood function is computationally challenging, because the objective function is nondifferentiable and nonconcave. In this article, we propose a new unified algorithm based on the local linear approximation (LLA) for maximizing the penalized likelihood for a broad class of concave penalty functions. Convergence and other theoretical properties of the LLA algorithm are est…
Penalized least squares estimation is a popular technique in high-dimensional statistics. It includes such methods as the LASSO, the group LASSO, and the nuclear norm penalized least squares. The existing theory of these methods is not fully satisfying since it allows one to prove oracle inequalities with fixed high probability only for the estimators depending on this probability. Furthermore, the control of compatibility factors appearing in the oracle bounds is often not explicit. Some very recent developments suggest that the theory of oracle inequalities can be revised in an improved way.…
Penalized spline regression is a popular method for scatterplot smoothing, but there has long been a debate on how to construct confidence intervals for penalized spline fits. Due to the penalty, the fitted smooth curve is a biased estimate of the target function. Many methods, including Bayesian intervals and the simple-shift bias-reduction, have been proposed to upgrade the coverage of the confidence intervals, but these methods usually fail to adequately improve the situation at predictor values where the function is sharply curved. In this paper, we develop a novel approach to improving th…
We provide a necessary and sufficient condition for the uniqueness of penalized least-squares estimators whose penalty term is given by a norm with a polytope unit ball, covering a wide range of methods including SLOPE, PACS, fused, clustered and classical LASSO as well as the related method of basis pursuit. We consider a strong type of uniqueness that is relevant for statistical problems. The uniqueness condition is geometric and involves how the row span of the design matrix intersects the faces of the dual norm unit ball, which for SLOPE is given by the signed permutahedron. Further consid…
In linear regression, SLOPE is a new convex analysis method that generalizes the Lasso via the sorted L1 penalty: larger fitted coefficients are penalized more heavily. This magnitude-dependent regularization requires an input of penalty sequence $λ$, instead of a scalar penalty as in the Lasso case, thus making the design extremely expensive in computation. In this paper, we propose two efficient algorithms to design the possibly high-dimensional SLOPE penalty, in order to minimize the mean squared error. For Gaussian data matrices, we propose a first order Projected Gradient Descent (PGD) un…
Sparse linear discriminant analysis via penalized optimal scoring is a successful tool for classification in high-dimensional settings. While the variable selection consistency of sparse optimal scoring has been established, the corresponding prediction and estimation consistency results have been lacking. We bridge this gap by providing probabilistic bounds on out-of-sample prediction error and estimation error of multi-class penalized optimal scoring allowing for diverging number of classes.
We present a new approach to solve the sparse approximation or best subset selection problem, namely find a $k$-sparse vector ${\bf x}\in\mathbb{R}^d$ that minimizes the $\ell_2$ residual $\lVert A{\bf x}-{\bf y} \rVert_2$. We consider a regularized approach, whereby this residual is penalized by the non-convex $\textit{trimmed lasso}$, defined as the $\ell_1$-norm of ${\bf x}$ excluding its $k$ largest-magnitude entries. We prove that the trimmed lasso has several appealing theoretical properties, and in particular derive sparse recovery guarantees assuming successful optimization of the pena…
Variable selection is fundamental to high-dimensional statistical modeling. Many variable selection techniques may be implemented by maximum penalized likelihood using various penalty functions. Optimizing the penalized likelihood function is often challenging because it may be nondifferentiable and/or nonconcave. This article proposes a new class of algorithms for finding a maximizer of the penalized likelihood for a broad class of penalty functions. These algorithms operate by perturbing the penalty function slightly to render it differentiable, then optimizing this differentiable function u…
Tel Aviv University（特拉维夫大学）；The Open University of Israel（以色列开放大学）
In this paper we consider high-dimensional multiclass classification by sparse multinomial logistic regression. We propose first a feature selection procedure based on penalized maximum likelihood with a complexity penalty on the model size and derive the nonasymptotic bounds for misclassification excess risk of the resulting classifier. We establish also their tightness by deriving the corresponding minimax lower bounds. In particular, we show that there exist two regimes corresponding to small and large number of classes. The bounds can be reduced under the additional low noise condition. To…
The least absolute shrinkage and selection operator (lasso) and ridge regression produce usually different estimates although input, loss function and parameterization of the penalty are identical. In this paper we look for ridge and lasso models with identical solution set. It turns out, that the lasso model with shrink vector $λ$ and a quadratic penalized model with shrink matrix as outer product of $λ$ with itself are equivalent, in the sense that they have equal solutions. To achieve this, we have to restrict the estimates to be positive. This doesn't limit the area of application since we…
We consider penalized regression models under a unified framework where the particular method is determined by the form of the penalty term. We propose a fully Bayesian approach that incorporates both sparse and dense settings and show how to use a type of model averaging approach to eliminate the nuisance penalty parameters and perform inference through the marginal posterior distribution of the regression coefficients. We establish tail robustness of the resulting estimator as well as conditional and marginal posterior consistency. We develop an efficient component-wise Markov chain Monte Ca…
Big Data Lab, Baidu Research（百度研究院大数据实验室）；School of Artificial Intelligence and Automation Huazhong University of Science and Technology（华中科技大学人工智能与自动化学院）
Principal component analysis (PCA) has been widely used as an effective technique for feature extraction and dimension reduction. In the High Dimension Low Sample Size (HDLSS) setting, one may prefer modified principal components, with penalized loadings, and automated penalty selection by implementing model selection among these different models with varying penalties. The earlier work [1, 2] has proposed penalized PCA, indicating the feasibility of model selection in $L_2$- penalized PCA through the solution path of Ridge regression, however, it is extremely time-consuming because of the int…
The problems of model and variable selections for classification trees are jointly considered. A penalized criterion is proposed which explicitly takes into account the number of variables, and a risk bound inequality is provided for the tree classifier minimizing this criterion. This penalized criterion is compared to the one used during the pruning step of the CART algorithm. It is shown that the two criteria are similar under some specific margin assumptions. In practice, the tuning parameter of the CART penalty has to be calibrated by hold-out. Simulation studies are performed which confir…
L1 -penalized regression methods such as the Lasso (Tibshirani 1996) that achieve both variable selection and shrinkage have been very popular. An extension of this method is the Fused Lasso (Tibshirani and Wang 2007), which allows for the incorporation of external information into the model. In this article, we develop new and fast algorithms for solving the Fused Lasso which are based on coordinate-wise optimization. This class of algorithms has recently been applied very successfully to solve L1 -penalized problems very quickly (Friedman et al. 2007). As a straightforward coordinate-wise pr…
Graphical models are frequently used to explore networks, such as genetic networks, among a set of variables. This is usually carried out via exploring the sparsity of the precision matrix of the variables under consideration. Penalized likelihood methods are often used in such explorations. Yet, positive-definiteness constraints of precision matrices make the optimization problem challenging. We introduce nonconcave penalties and the adaptive LASSO penalty to attenuate the bias problem in the network estimation. Through the local linear approximation to the nonconcave penalty functions, the p…
Personalization is becoming an important feature in many predictive applications. We introduce a penalized regression method implementing personalization inherently in the penalty. Personalized angle (PAN) regression constructs regression coefficients that are specific to the covariate vector for which one is producing a prediction, thus personalizing the regression model itself. This is achieved by penalizing the angles in a hyperspherical parametrization of the regression coefficients. For an orthogonal design matrix, it is shown that the PAN estimate is the solution to a low-dimensional eig…
The EM algorithm is a widely used methodology for penalized likelihood estimation. Provable monotonicity and convergence are the hallmarks of the EM algorithm and these properties are well established for smooth likelihood and smooth penalty functions. However, many relaxed versions of variable selection penalties are not smooth. The goal of this paper is to introduce a new class of Space Alternating Penalized Kullback Proximal extensions of the EM algorithm for nonsmooth likelihood inference. We show that the cluster points of the new method are stationary points even when on the boundary of …
We consider the problem of simultaneous variable selection and estimation in partially linear models with a divergent number of covariates in the linear part, under the assumption that the vector of regression coefficients is sparse. We apply the SCAD penalty to achieve sparsity in the linear part and use polynomial splines to estimate the nonparametric component. Under reasonable conditions, it is shown that consistency in terms of variable selection and estimation can be achieved simultaneously for the linear and nonparametric components. Furthermore, the SCAD-penalized estimators of the non…
We propose a new class of nonconvex penalty functions, based on data depth functions, for multitask sparse penalized regression. These penalties quantify the relative position of rows of the coefficient matrix from a fixed distribution centered at the origin. We derive the theoretical properties of an approximate one-step sparse estimator of the coefficient matrix using local linear approximation of the penalty function, and provide algorithm for its computation. For orthogonal design and independent responses, the resulting thresholding rule enjoys near-minimax optimal risk performance, simil…
Many recent developments in the high-dimensional statistical time series literature have centered around time-dependent applications that can be adapted to regularized least squares. Of particular interest is the lasso, which both serves to regularize and provide feature selection. The lasso requires the specification of a penalty parameter that determines the degree of sparsity to impose. The most popular penalty parameter selection approaches that respect time dependence are very computationally intensive and are not appropriate for modeling certain classes of time series. We propose enhanci…
Determining how to appropriately select the tuning parameter is essential in penalized likelihood methods for high-dimensional data analysis. We examine this problem in the setting of penalized likelihood methods for generalized linear models, where the dimensionality of covariates p is allowed to increase exponentially with the sample size n. We propose to select the tuning parameter by optimizing the generalized information criterion (GIC) with an appropriate model complexity penalty. To ensure that we consistently identify the true model, a range for the model complexity penalty is identifi…
Maximum likelihood estimation in logistic regression with mixed effects is known to often result in estimates on the boundary of the parameter space. Such estimates, which include infinite values for fixed effects and singular or infinite variance components, can cause havoc to numerical estimation procedures and inference. We introduce an appropriately scaled additive penalty to the log-likelihood function, or an approximation thereof, which penalizes the fixed effects by the Jeffreys' invariant prior for the model with no random effects and the variance components by a composition of negativ…
