The motion of a deformable active particle in linear shear flow is explored theoretically. Based on symmetry considerations, in two spatial dimensions, we propose coupled nonlinear dynamical equations for the particle position, velocity, deformation, and rotation. In our model, both, passive rotations induced by the shear flow as well as active spinning motions, are taken into account. Our equations reduce to known models in the two limits of vanishing shear flow and vanishing particle deformability. For varied shear rate and particle propulsion speed, we solve the equations numerically and obtain a manifold of different dynamical modes including active straight motion, periodic motions, motions on undulated cycloids, winding motions, as well as quasi-periodic and chaotic motions induced at high shear rates. The types of motion are distinguished by different characteristics in the real-space trajectories and in the dynamical behavior of the particle orientation and its deformation. Our predictions can be verified in experiments on self-propelled droplets exposed to a linear shear flow.
We study the rheology of a suspension of soft deformable droplets subjected to a pressure-driven flow. Through computer simulations, we measure the apparent viscosity as a function of droplet concentration and pressure gradient, and provide evidence of a discontinuous shear thinning behaviour, which occurs at a concentration-dependent value of the forcing. We further show that this response is associated with a nonequilibrium transition between a `hard' (or less deformable) phase, which is nearly jammed and flows very slowly, and a `soft' (or more deformable) phase, which flows much more easil…
We demonstrate the existence of unconventional rheological and memory properties in systems of soft-deformable particles whose energy depends on their shape, via numerical simulations. At large strains, these systems experience an unconventional shear weakening transition characterized by an increase in the mechanical energy and a drastic drop in shear stress, which stems from the emergence of short-ranged tetratic order. In these weakened states, the contact network evolves reversibly under strain reversal, keeping memory of its initial state, while the microscopic dynamics is irreversible.
In most practical situations, active particles are affected by their environment, for example, by a chemical concentration gradient, light intensity, gravity, or confinement. In particular, the effect of an external flow field is important for particles swimming in a solvent fluid. For deformable active particles such as self-propelled liquid droplets and active vesicles, as well as microorganisms such as euglenas and neutrophils, a general description has been developed by focusing on shape deformation. In this review, we present our recent studies concerning the dynamics of a single active d…
We consider a microscopic field theoretical approach for interacting active nematic particles. With only steric interactions the self-propulsion strength in such systems can lead to different collective behaviour, e.g., synchronized self-spinning and collective translation. The different behaviour results from the delicate interplay between internal nematic structure, particle shape deformation and particle-particle interaction. For intermediate active strength an asymmetric shape emerges and leads to chirality and self-spinning crystals. For larger active strength the shape is symmetric and t…
Dense suspensions of soft colloidal particles display a broad range of physical and rheological properties which are still far from being fully understood. To elucidate the role of deformability on colloidal flow, we employ computer simulations to measure the apparent viscosity of a system of droplets of variable surface tension subjected to a pressure-driven flow. We confirm that our suspension generically undergoes discontinuous shear thinning, and determine the dependence of the onset of the discontinuity on surface tension. We find that the effective viscosity of the suspension is mainly d…
Dynamics of active deformable particles in an external Poiseuille flow is investigated. In order to make the analysis general, we employ time-evolution equations derived from symmetry considerations that take into account an elliptical shape deformation. First, we clarify the relation of our model to that of rigid active particles. Then, we study the dynamical modes that active deformable particles exhibit by changing the strength of the external flow. We emphasize the difference between the active particles that tend to self-propel parallel to the elliptical shape deformation and those self-p…
We analyze a suspension of deformable particles in a pressure-driven flow. The suspension is composed of neutrally buoyant initially spherical particles and a Newtonian carrier fluid, and the flow is solved by means of direct numerical simulations, using a fully Eulerian method based on a one-continuum formulation. The solid phase is modeled with an incompressible viscous hyperelastic constitutive relation, and the flow is characterized by three main dimensionless parameters, namely the solid volume fraction, the Reynolds and capillary numbers. The dependency of the effective viscosity on thes…
This work investigates the orbital dynamics of a fluid-filled deformable prolate capsule in unbounded shear flow. The motion of the capsule is simulated using a model that incorporates shear elasticity, area dilatation, and bending resistance. Here the deformability of the capsule is characterized by capillary number Ca, which represents the ratio of viscous stresses to elastic restoring stresses. For a capsule with small bending stiffness, at a given Ca, the orientation converges over time towards a unique stable orbit independent of the initial orientation. With increasing Ca, four dynamical…
We study the dynamics of asymmetric, deformable particles in oscillatory, linear shear flow. By simulating the motion of a dumbbell, a ring polymer, and a capsule we show that cross-stream migration occurs for asymmetric elastic particles even in linear shear flow if the shear rate varies in time. The migration is generic as it does not depend on the particle dimension. Importantly, the migration velocity and migration direction are robust to variations of the initial particle orientation, making our proposed scheme suitable for sorting particles with asymmetric material properties.
Efficient and accurate simulations of deformable particles immersed in a fluid using a combined immersed boundary lattice Boltzmann finite element method
在简单剪切流中自由悬浮的初始球形胶囊的变形可以在小变形的极限下解析计算[D。Barthes-Bianca，J. M. Rallison，在线性剪切流中自由悬浮的胶囊的时间相关变形，J. Fluid Mech.113（1981）251-267]。这些解析近似被用来研究的网格镶嵌方法，空间分辨率，和离散δ函数的浸入边界法的数值结果上得到的耦合浸入边界格子Boltzmann有限元方法的影响。对于囊膜的描述，采用有限元法和Skalak本构模型[R。Skalak等人，红细胞膜的应变能函数。J. 13（1973）245-264]已经被使用。我们的主要目标是调查所提出的模型为小分辨率提供了一个良好的基础，有效而准确的模拟多个可变形的粒子浸没在流体中。我们得出的结论是，膜网格的细节，镶嵌方法和分辨率，只发挥次要作用。流体动力学分辨率，即，离散δ函数的宽度可以显著地影响模拟的精度。δ函数的离散化引入了人工长度尺度，其有效地改变了胶囊的半径和可变形性。我们讨论的可能性，减少计算时间的变形物体浸没在流体中的模拟，同时保持高精度。
We review progress in active hydrodynamic descriptions of flowing media on curved and deformable manifolds: the state-of-the-art in continuum descriptions of single-layers of epithelial and/or other tissues during development. First, after a brief overview of activity, flows and hydrodynamic descriptions, we highlight the generic challenge of identifying the dependence on dynamical variables of so-called active kinetic coefficients -- active counterparts to dissipative Onsager coefficients. We go on to describe some of the subtleties concerning how curvature and active flows interact, and the …
We numerically investigate the morphology and disclination line dynamics of active nematic droplets in three dimensions. Although our model only incorporates the simplest possible form of achiral active stress, active nematic droplets display an unprecedented range of complex morphologies. For extensile activity finger-like protrusions grow at points where disclination lines intersect the droplet surface. For contractile activity, however, the activity field drives cup-shaped droplet invagination, run-and-tumble motion or the formation of surface wrinkles. This diversity of behaviour is explai…
Cell deformability is an essential determinant for tissue-scale mechanical nature, such as fluidity and rigidity, and is thus crucial for understanding tissue homeostasis and stable developmental processes. However, numerical simulations for the collective dynamics of cells with arbitral cell deformations akin to mesenchymal, ameboid, and epithelial cells in a non-confluent situation need high computational costs and are still challenging. Here we propose a new method that allows us to study significantly larger numbers of cells than existing methods. Using the method, we investigated the dens…
Fundamental biological and biomimetic processes, from tissue morphogenesis to soft robotics, rely on the propagation of chemical and mechanical surface waves to signal and coordinate active force generation. The complex interplay between surface geometry and contraction wave dynamics remains poorly understood, but will be essential for the future design of chemically-driven soft robots and active materials. Here, we couple prototypical chemical wave and reaction-diffusion models to non-Euclidean shell mechanics to identify and characterize generic features of chemo-mechanical wave propagation …
We measure the deformation of particles made of several slender arms in a two-dimensional (2D) linear shear and a three-dimensional (3D) turbulent flow. We show how these measurements of arm deformations along with the rotation rate of the particle allow us to extract the velocity gradient tensor of the flow. The particles used in the experiments have three symmetric arms in a plane (triads) and are fabricated using 3D printing of a flexible polymeric material. Deformation measurements of a particle free to rotate about a fixed axis in a 2D simple shear flow are used to validate our model rela…
We consider a confined sheared active polar liquid crystal with a uniform orientation and study the effect of variations in the magnitude of polarization. Restricting our analysis to one-dimensional geometries, we demonstrate that with asymmetric boundary conditions, this system is characterized, macroscopically, by a linear shear stress vs. shear strain relationship that does not pass through the origin: At a zero strain rate, the fluid sustains a non-zero stress. Analytic solutions for the polarization, density, and velocity fields are derived for asymptotically large or small systems and ar…
Shear-Induced Collective Shape Oscillations in Dense Soft Suspensions
Rudolf Peierls Centre for Theoretical Physics, University of Oxford（鲁道夫·皮尔斯理论物理中心，牛津大学）；Centro de Física Teórica e Computacional, Faculdade de Ciências, Universidade de Lisboa（理论与计算物理中心，理学院，里斯本大学）；Departamento de Física, Faculdade de Ciências, Universidade de Lisboa（物理系，理学院，里斯本大学）
Soft particles suspended in fluids flowing through microchannels are often encountered in biological flows such as cells in vessels. They can deform under flow or when subject to mechanical stresses as they interact with themselves. Deformability adds distinct characteristics to the nature of the flow of these particles. We simulate deformable particles suspended in a fluid at a high volume fraction flowing through a 3D wetting channel. We find a discontinuous shear thinning transition, which depends on the particle deformability. The capillary number is the main parameter that controls the tr…
We use computer simulations to study the morphology and rheological properties of a bidimensional emulsion resulting from a mixture of a passive isotropic fluid and an active contractile polar gel, in the presence of a surfactant that favours the emulsification of the two phases. By varying the intensity of the contractile activity and of an externally imposed shear flow, we find three possible morphologies. For low shear rates, a simple lamellar state is obtained. For intermediate activity and shear rate, an asymmetric state emerges, which is characterized by shear and concentration banding a…
In vitro reconstituted active systems, such as the ATP-driven microtubule bundle suspension developed by the Dogic group, provide a fertile testing ground for elucidating the phenomenology of active liquid crystalline states. Controlling such novel phases of matter crucially depends on our knowledge of their material and physical properties. In this letter, we show that the rheological properties of an active nematic film can be probed by varying its hydrodynamic coupling to a bounding oil layer. Using the motion of disclinations as intrinsic tracers of the flow field and a hydrodynamic model,…
Experiments and theory have shown that cell monolayers and epithelial tissues exhibit solid-liquid and glass-liquid transitions. These transitions are biologically relevant to our understanding of embryonic development, wound healing, and cancer. Current models typically consider purely two-dimensional monolayers with no overlaps between neighboring cells. In reality, overlaps are important, and they may be precursors of cell extrusion -- a key biophysical process to maintain homeostasis in epithelial tissues. Here, we use a multi-phase field model to study the solid-liquid transition in a con…
The steady-state behavior of a dilute suspension of self-propelled filaments confined between planar walls subjected to the Couette-flow is reported herein. The effect of hydrodynamics has been taken into account using a mesoscale simulation approach. We present a detailed analysis of positional and angular probability distributions of filaments with varying propulsive force and shear-flow. Distribution of centre-of-mass of the filament shows adsorption near the surfaces, which diminishes with the flow. The excess density of filaments decreases with Weissenberg number as $Wi^{-β}$ with an expo…
Bacterial suspensions--a premier example of active fluids--show an unusual response to shear stresses. Instead of increasing the viscosity of the suspending fluid, the emergent collective motions of swimming bacteria can turn a suspension into a "superfluid" with zero apparent viscosity. Although the existence of active "superfluids" has been demonstrated in bulk rheological measurements, the microscopic origin and dynamics of such an exotic phase have not been experimentally probed. Here, using high-speed confocal rheometry, we study the dynamics of concentrated bacterial suspensions under si…
The rheological behaviour of an emulsion made of an active polar component and an isotropic passive fluid is studied by lattice Boltzmann methods. Different flow regimes are found by varying the values of shear rate and extensile activity (occurring, e.g., in microtubule-motor suspensions). By increasing activity, a first transition occurs from linear flow regime to spontaneous persistent unidirectional macro-scale flow, followed by another transition either to (low shear) intermittent flow regime with coexistence of states with positive, negative, and vanishing apparent viscosity, or to (high…
Using a simple model of self-propelled particle, the effective shear viscosity of a dilute, spatially homogeneous suspension of active particles is studied. We use formulation of non-linear Fokker-Planck equation to drive a kinetic description, including the effect of external flow field, rotary diffusion, and particle-particle hydrodynamic interactions in two dimensions. Analytical expressions are obtained for the stress tensor at small Peclet numbers, in a simple shear flow, up to second order of volume fraction of the swimmers, which shows the explicit dependence of shear viscosity on the d…
There are two main classes of physics-based models for two-dimensional cellular materials: packings of repulsive disks and the vertex model. These models have several disadvantages. For example, disk interactions are typically a function of particle overlap, yet the model assumes that the disks remain circular during overlap. The shapes of the cells can vary in the vertex model, however, the packing fraction is fixed at $ϕ=1$. Here, we describe the deformable particle model (DPM), where each particle is a polygon composed of a large number of vertices. The total energy includes three terms: tw…
To fully harness the potential of artificial active colloids, investigation of their response to various external stimuli including external flow is of great interest. Therefore, in this study, we perform experiments on SiO2-Pt Janus particles suspended in an aqueous medium in a capillary subjected to different shear flow rates. Particles were propelled using varied H2O2 (fuel) concentrations. For a particular propulsion speed, with increasing shear flow, a transition of motion of active Janus particles from the usual random active motion to preferential motion across stream-lines and then fin…
Of all complex fluids, it is probably the rheology of polymers we understand best. In-depth insight into the entanglement and reptation of individual polymers allows us to predict for instance the shear-thinning rheology and the behaviour in virtually any flow situation of practical importance. The situation is markedly different when we move from passive to active polymers where the coupling of filament activity, hydrodynamic interactions, and conformations open the way to a plethora of novel structural and dynamical features. Here we experimentally study the rheology of long, slender and ent…
