Many methods for causal inference generate directed acyclic graphs (DAGs) that formalize causal relations between $n$ variables. Given the joint distribution on all these variables, the DAG contains all information about how intervening on one variable changes the distribution of the other $n-1$ variables. However, quantifying the causal influence of one variable on another one remains a nontrivial question. Here we propose a set of natural, intuitive postulates that a measure of causal strength should satisfy. We then introduce a communication scenario, where edges in a DAG play the role of channels that can be locally corrupted by interventions. Causal strength is then the relative entropy distance between the old and the new distribution. Many other measures of causal strength have been proposed, including average causal effect, transfer entropy, directed information, and information flow. We explain how they fail to satisfy the postulates on simple DAGs of $\leq3$ nodes. Finally, we investigate the behavior of our measure on time-series, supporting our claims with experiments on simulated data.
The analysis of causal effects when the outcome of interest is possibly truncated by death has a long history in statistics and causal inference. The survivor average causal effect is commonly identified with more assumptions than those guaranteed by the design of a randomized clinical trial or using sensitivity analysis. This paper demonstrates that individual level causal effects in the `always survivor' principal stratum can be identified with no stronger identification assumptions than randomization. We illustrate the practical utility of our methods using data from a clinical trial on pat…
Spurious association arises from covariance between propensity for the treatment and individual risk for the outcome. For sensitivity analysis with stochastic counterfactuals we introduce a methodology to characterize uncertainty in causal inference from natural experiments and quasi-experiments. Our sensitivity parameters are standardized measures of variation in propensity and individual risk, and one minus their geometric mean is an intuitive measure of randomness in the data generating process. Within our latent propensity-risk model, we show how to compute from contingency table data a th…
Neuroimaging datasets keep growing in size to address increasingly complex medical questions. However, even the largest datasets today alone are too small for training complex machine learning models. A potential solution is to increase sample size by pooling scans from several datasets. In this work, we combine 12,207 MRI scans from 15 studies and show that simple pooling is often ill-advised due to introducing various types of biases in the training data. First, we systematically define these biases. Second, we detect bias by experimentally showing that scans can be correctly assigned to the…
A tutorial on discovering and quantifying the effect of latent causal sources of multimodal EHR data
Department of Biomedical Informatics Vanderbilt University Medical Center（生物医学信息学系范德堡大学医学中心）；Department of Biomedical Informatics University of Pittsburgh（生物医学信息学系匹兹堡大学）；Departments of Medicine & Biomedical Informatics Vanderbilt University Medical Center（医学与生物医学信息学系范德堡大学医学中心）；Departments of Biomedical Informatics & Computer Science Vanderbilt University Medical Center & Vanderbilt University（生物医学信息学与计算机科学系范德堡大学医学中心及范德堡大学）
This paper quantifies the effect of speed cameras on road traffic collisions using an approximate Bayesian doubly-robust (DR) causal inference estimation method. Previous empirical work on this topic, which shows a diverse range of estimated effects, is based largely on outcome regression (OR) models using the Empirical Bayes approach or on simple before and after comparisons. Issues of causality and confounding have received little formal attention. A causal DR approach combines propensity score (PS) and OR models to give an average treatment effect (ATE) estimator that is consistent and asym…
Estimating average causal effect (ACE) is useful whenever we want to know the effect of an intervention on a given outcome. In the absence of a randomized experiment, many methods such as stratification and inverse propensity weighting have been proposed to estimate ACE. However, it is hard to know which method is optimal for a given dataset or which hyperparameters to use for a chosen method. To this end, we provide a framework to characterize the loss of a causal inference method against the true ACE, by framing causal inference as a representation learning problem. We show that many popular…
In recent years, a lot of research has been conducted within the area of causal inference and causal learning. Many methods have been developed to identify the cause-effect pairs in models and have been successfully applied to observational real-world data to determine the direction of causal relationships. Yet in bivariate situations, causal discovery problems remain challenging. One class of such methods, that also allows tackling the bivariate case, is based on Additive Noise Models (ANMs). Unfortunately, one aspect of these methods has not received much attention until now: what is the imp…
Quantifying Causes of Arctic Amplification via Deep Learning based Time-series Causal Inference
University of Maryland, Baltimore County（马里兰大学巴尔的摩郡分校）；University of Colorado Boulder（科罗拉多大学博尔德分校）；Geophysical Fluid Dynamics Laboratory, NOAA（美国国家海洋和大气管理局地球物理流体动力学实验室）；NSF HDR Institute for Harnessing Data and Model Revolution in the Polar Regions (iHARP)（美国国家科学基金会HDR极地数据与模型变革应用研究所（iHARP））
Marine conservation preserves fish biodiversity, protects marine and coastal ecosystems, and supports climate resilience and adaptation. Despite the importance of establishing marine protected areas (MPAs), research on the effectiveness of MPAs with different conservation policies is limited due to the lack of quantitative MPA information. In this paper, leveraging a global MPA database, we investigate the causal impact of MPA policies on fish biodiversity. To address challenges posed by this clustered and confounded observational study, we construct a matching estimator of the average treatme…
University of Oxford（牛津大学）；Technion – Israel Institute of Technology（以色列理工学院）
We study the problem of learning conditional average treatment effects (CATE) from high-dimensional, observational data with unobserved confounders. Unobserved confounders introduce ignorance -- a level of unidentifiability -- about an individual's response to treatment by inducing bias in CATE estimates. We present a new parametric interval estimator suited for high-dimensional data, that estimates a range of possible CATE values when given a predefined bound on the level of hidden confounding. Further, previous interval estimators do not account for ignorance about the CATE associated with s…
Unquantified sources of uncertainty in observational causal analyses can break the integrity of the results. One would never want another analyst to repeat a calculation with the same dataset, using a seemingly identical procedure, only to find a different conclusion. However, as we show in this work, there is a typical source of uncertainty that is essentially never considered in observational causal studies: the choice of match assignment for matched groups, that is, which unit is matched to which other unit before a hypothesis test is conducted. The choice of match assignment is anything bu…
MIT Lincoln Laboratory（麻省理工学院林肯实验室）；Novetta, LLC（诺维塔有限责任公司）；MIT Institute for Data, Systems, and Society（麻省理工学院数据、系统与社会研究所）
This study quantifies influence between media outlets by applying a novel methodology that uses causal effect estimation on networks and transformer language models. We demonstrate the obscured influence of state-controlled outlets over other outlets, regardless of orientation, by analyzing a large dataset of quotations from over 100 thousand articles published by the most prominent European and Russian traditional media outlets, appearing between May 2018 and October 2019. The analysis maps out the network structure of influence with news wire services serving as prominent bridges that connec…
Causal inference is a science with multi-disciplinary evolution and applications. On the one hand, it measures effects of treatments in observational data based on experimental designs and rigorous statistical inference to draw causal statements. One of the most influential framework in quantifying causal effects is the potential outcomes framework. On the other hand, causal graphical models utilizes directed edges to represent causalities and encodes conditional independence relationships among variables in the graphs. A series of research has been done both in reading-off conditional indepen…
We propose a counterfactual approach to train ``causality-aware" predictive models that are able to leverage causal information in static anticausal machine learning tasks (i.e., prediction tasks where the outcome influences the features). In applications plagued by confounding, the approach can be used to generate predictions that are free from the influence of observed confounders. In applications involving observed mediators, the approach can be used to generate predictions that only capture the direct or the indirect causal influences. Mechanistically, we train supervised learners on (coun…
In causal estimation problems, the parameter of interest is often only partially identified, implying that the parameter cannot be recovered exactly, even with infinite data. Here, we study Bayesian inference for partially identified treatment effects in multi-treatment causal inference problems with unobserved confounding. In principle, inferring the partially identified treatment effects is natural under the Bayesian paradigm, but the results can be highly sensitive to parameterization and prior specification, often in surprising ways. It is thus essential to understand which aspects of the …
Increasingly, there is a marked interest in estimating causal effects under network interference due to the fact that interference manifests naturally in networked experiments. However, network information generally is available only up to some level of error. We study the propagation of such errors to estimators of average causal effects under network interference. Specifically, assuming a four-level exposure model and Bernoulli random assignment of treatment, we characterize the impact of network noise on the bias and variance of standard estimators in homogeneous and inhomogeneous networks.…
InfluenceField: A Differentiable Field with Interventionally Identifiable Causal Structure for Multimodal World Modeling
Mathematical Institute, University of Oxford（牛津大学数学研究所）；Department of Computer Science, University of Oxford（牛津大学计算机科学系）；School of Mathematical Sciences, University of Nottingham Ningbo China（宁波诺丁汉大学数学科学学院）
The resource theory of causal influence and knowledge of causal influence
Perimeter Institute for Theoretical Physics（佩雷尔曼理论物理研究所）；Department of Physics and Astronomy, University of Waterloo（滑铁卢大学物理与天文系）；International Centre for Theory of Quantum Technologies, University of Gdańsk（格但斯克大学国际量子技术理论中心）；Spotify；Department of Physics and Astronomy, University College London（伦敦大学学院物理与天文系）；Basic Research Community for Physics e.V.（基础物理研究社区）
In this paper we explore partial coherence as a tool for evaluating causal influence of one signal sequence on another. In some cases the signal sequence is sampled from a time- or space-series. The key idea is to establish a connection between questions of causality and questions of partial coherence. Once this connection is established, then a scale-invariant partial coherence statistic is used to resolve the question of causality. This coherence statistic is shown to be a likelihood ratio, and its null distribution is shown to be a Wilks Lambda. It may be computed from a composite covarianc…
