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arXiv 1009.4550math-phcond-mat.stat-mechmath.MPmath.PR
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马尔可夫链循环分解的Gallavotti-Cohen型对称性及其在生物化学中的应用

Gallavotti-Cohen-Type symmetry related to cycle decompositions for Markov chains and biochemical applications

A. Faggionato, D. Di Pietro

摘要:

我们稍微扩展了波动定理\cite{LS}的发电机的总和,考虑连续时间马尔可夫链的有限状态空间,其基础图形有多个边缘和没有循环。这种扩展框架适用于分析化学系统。作为简单的推论,我们用另一种方法导出了D. Andrieux和P. Gaspard,用于与一组基本定向循环\cite{AG2}相关的弦上的通量。我们将每个随机轨迹与图上的定向循环相关联,并将其分解为定向循环的基础。我们证明了在这个分解的系数的波动定理。由此产生的涨落定理涉及到循环亲和性,在许多真实系统中,循环亲和性对应于宏观力。此外,当分析马尔可夫链的可加泛函的大偏差时,上述分解是有用的。作为应用的例子,在一个非常普遍的情况下,我们推导出的分子马达的机械和化学电流沿周期性的灯丝移动的波动关系。

英文摘要:

We slightly extend the fluctuation theorem obtained in \cite{LS} for sums of generators, considering continuous-time Markov chains on a finite state space whose underlying graph has multiple edges and no loop. This extended frame is suited when analyzing chemical systems. As simple corollary we derive in a different method the fluctuation theorem of D. Andrieux and P. Gaspard for the fluxes along the chords associated to a fundamental set of oriented cycles \cite{AG2}. We associate to each random trajectory an oriented cycle on the graph and we decompose it in terms of a basis of oriented cycles. We prove a fluctuation theorem for the coefficients in this decomposition. The resulting fluctuation theorem involves the cycle affinities, which in many real systems correspond to the macroscopic forces. In addition, the above decomposition is useful when analyzing the large deviations of additive functionals of the Markov chain. As example of application, in a very general context we derive a fluctuation relation for the mechanical and chemical currents of a molecular motor moving along a periodic filament.

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