Self-supervised monocular depth estimation serves as a key task in the development of endoscopic navigation systems. However, performance degradation persists due to uneven illumination inherent in endoscopic images, particularly in low-intensity regions. Existing low-light enhancement techniques fail to effectively guide the depth network. Furthermore, solutions from other fields, like autonomous driving, require well-lit images, making them unsuitable and increasing data collection burdens. To this end, we present DeLight-Mono - a novel self-supervised monocular depth estimation framework with illumination decoupling. Specifically, endoscopic images are represented by a designed illumination-reflectance-depth model, and are decomposed with auxiliary networks. Moreover, a self-supervised joint-optimizing framework with novel losses leveraging the decoupled components is proposed to mitigate the effects of uneven illumination on depth estimation. The effectiveness of the proposed methods was rigorously verified through extensive comparisons and an ablation study performed on two public datasets.
The Johns Hopkins University（约翰斯·霍普金斯大学）；Johns Hopkins Medical Institutions（约翰斯·霍普金斯医疗机构）
We present a self-supervised approach to training convolutional neural networks for dense depth estimation from monocular endoscopy data without a priori modeling of anatomy or shading. Our method only requires sequential data from monocular endoscopic videos and a multi-view stereo reconstruction method, e.g. structure from motion, that supervises learning in a sparse but accurate manner. Consequently, our method requires neither manual interaction, such as scaling or labeling, nor patient CT in the training and application phases. We demonstrate the performance of our method on sinus endosco…
Johns Hopkins University（约翰斯·霍普金斯大学）；Philips Research（飞利浦研究院）；Johns Hopkins Medical Institutions（约翰斯·霍普金斯医疗机构）；Facebook（脸书）
We present a self-supervised approach to training convolutional neural networks for dense depth estimation from monocular endoscopy data without a priori modeling of anatomy or shading. Our method only requires monocular endoscopic videos and a multi-view stereo method, e.g., structure from motion, to supervise learning in a sparse manner. Consequently, our method requires neither manual labeling nor patient computed tomography (CT) scan in the training and application phases. In a cross-patient experiment using CT scans as groundtruth, the proposed method achieved submillimeter mean residual …
Recently, self-supervised learning technology has been applied to calculate depth and ego-motion from monocular videos, achieving remarkable performance in autonomous driving scenarios. One widely adopted assumption of depth and ego-motion self-supervised learning is that the image brightness remains constant within nearby frames. Unfortunately, the endoscopic scene does not meet this assumption because there are severe brightness fluctuations induced by illumination variations, non-Lambertian reflections and interreflections during data collection, and these brightness fluctuations inevitably…
EndoMUST: Monocular Depth Estimation for Robotic Endoscopy via End-to-end Multi-step Self-supervised Training
Academy for Engineering & Technology, Fudan University（工程与技术学院，复旦大学）；Shanghai Key Laboratory of Medical Image Computing and Computer Assisted Intervention, Fudan University（上海医学图像计算与计算机辅助干预重点实验室，复旦大学）
Medical endoscopy remains a challenging application for simultaneous localization and mapping (SLAM) due to the sparsity of image features and size constraints that prevent direct depth-sensing. We present a SLAM approach that incorporates depth predictions made by an adversarially-trained convolutional neural network (CNN) applied to monocular endoscopy images. The depth network is trained with synthetic images of a simple colon model, and then fine-tuned with domain-randomized, photorealistic images rendered from computed tomography measurements of human colons. Each image is paired with an …
Instituto de Investigación en Ingeniería de Aragón (I3A)（阿拉贡工程研究所（I3A））；Universidad de Zaragoza（萨拉戈萨大学）
Visual SLAM inside the human body will open the way to computer-assisted navigation in endoscopy. However, due to space limitations, medical endoscopes only provide monocular images, leading to systems lacking true scale. In this paper, we exploit the controlled lighting in colonoscopy to achieve the first in-vivo 3D reconstruction of the human colon using photometric stereo on a calibrated monocular endoscope. Our method works in a real medical environment, providing both a suitable in-place calibration procedure and a depth estimation technique adapted to the colon's tubular geometry. We val…
A geometry-aware deep network for depth estimation in monocular endoscopy
Northeastern University（东北大学）；Shenyang Institute of Automation, Chinese Academy of Sciences（中国科学院沈阳自动化研究所）；Institutes for Robotics and Intelligent Manufacturing, Chinese Academy of Sciences（中国科学院机器人与智能制造创新研究院）；Beihang University（北京航空航天大学）；General Hospital of Northern Theater Command（北部战区总医院）
V$^2$-SfMLearner: Learning Monocular Depth and Ego-motion for Multimodal Wireless Capsule Endoscopy
The Chinese University of Hong Kong（香港中文大学）；City University of Hong Kong（香港城市大学）；Southern University of Science and Technology（南方科技大学）；Hubei University of Technology（湖北工业大学）；Qilu Hospital of Shandong University（山东大学齐鲁医院）；Nantong University（南通大学）
NRGS-SLAM: Monocular Non-Rigid SLAM for Endoscopy via Deformation-Aware 3D Gaussian Splatting
Department of Mechanical and Automation Engineering and T Stone Robotics Institute, The Chinese University of Hong Kong（机械与自动化工程系和T Stone机器人研究所，香港中文大学）；School of Automation and Intelligent Sensing, the State Key Laboratory of Avionics Integration and Aviation System of-Systems Synthesis, and Shanghai Key Laboratory of Navigation and Location Based Services, Shanghai Jiao Tong University（自动化与智能感知学院、航空系统集成与航空系统综合国家重点实验室、上海导航与定位服务重点实验室，上海交通大学）
EndoGMDE: Generalizable Monocular Depth Estimation with Mixture of Low-Rank Experts for Diverse Endoscopic Scenes
Department of Electronic Engineering, The Chinese University of Hong Kong（香港中文大学电子工程系）；College of Biomedical Engineering, Fudan University（复旦大学生物医学工程学院）；Shanghai Key laboratory of Medical Image Computing and Computer Assisted Intervention（上海医学影像计算与计算机辅助手术重点实验室）；ENT Institute and Department of Otolaryngology, Eye & ENT Hospital of Fudan University（复旦大学眼耳鼻喉科医院耳鼻喉科及耳鼻喉科研究所）
Institute of Biomedical Engineering, Bogazici University（波加兹奇大学生物医学工程研究所）；Computer Science Department, University of Oxford（牛津大学计算机科学系）；Brigham and Women’s Hospital, Harvard Medical School（哈佛医学院布莱根妇女医院）；Cancer Data Science, Dana Farber Cancer Institute（丹娜-法伯癌症研究所癌症数据科学部）；Cancer Program, Broad Institute of Harvard and MIT（哈佛-麻省理工学院布罗德研究所癌症项目）；Institute for Systems and Robotics, University of Coimbra（科英布拉大学系统与机器人研究所）；Faculty of Medicine, Clinical Academic Center of Coimbra, University of Coimbra（科英布拉大学科英布拉临床学术中心医学院）；Department of Biomedical Engineering, Johns Hopkins University（约翰霍普金斯大学生物医学工程系）
Deep learning techniques hold promise to develop dense topography reconstruction and pose estimation methods for endoscopic videos. However, currently available datasets do not support effective quantitative benchmarking. In this paper, we introduce a comprehensive endoscopic SLAM dataset consisting of 3D point cloud data for six porcine organs, capsule and standard endoscopy recordings as well as synthetically generated data. A Panda robotic arm, two commercially available capsule endoscopes, two conventional endoscopes with different camera properties, and two high precision 3D scanners were…
LightNeuS: Neural Surface Reconstruction in Endoscopy using Illumination Decline
Inst. Investigación en Ingeniería de Aragón, I3A, Universidad de Zaragoza（阿拉贡工程研究院，I3A，萨拉戈塔大学）；CVLab, École Polytechnique Fédérale de Lausanne（洛桑联邦理工学院CV实验室）
University of Oulu（奥卢大学）；Czech Technical University in Prague（布拉格捷克理工大学）；Tampere University（坦佩雷大学）
In this paper, we propose enhancing monocular depth estimation by adding 3D points as depth guidance. Unlike existing depth completion methods, our approach performs well on extremely sparse and unevenly distributed point clouds, which makes it agnostic to the source of the 3D points. We achieve this by introducing a novel multi-scale 3D point fusion network that is both lightweight and efficient. We demonstrate its versatility on two different depth estimation problems where the 3D points have been acquired with conventional structure-from-motion and LiDAR. In both cases, our network performs…
Tokyo Institute of Technology（东京工业大学）；Nihon University School of Medicine（日本大学医学院）；Tsujinaka Hospital Kashiwanoha（柏叶辻中病院）
Gastroendoscopy has been a clinical standard for diagnosing and treating conditions that affect a part of a patient's digestive system, such as the stomach. Despite the fact that gastroendoscopy has a lot of advantages for patients, there exist some challenges for practitioners, such as the lack of 3D perception, including the depth and the endoscope pose information. Such challenges make navigating the endoscope and localizing any found lesion in a digestive tract difficult. To tackle these problems, deep learning-based approaches have been proposed to provide monocular gastroendoscopy with a…
Tokyo Institute of Technology（东京工业大学）；Nihon University School of Medicine（日本大学医学部）
Gastric endoscopy is a common clinical practice that enables medical doctors to diagnose the stomach inside a body. In order to identify a gastric lesion's location such as early gastric cancer within the stomach, this work addressed to reconstruct the 3D shape of a whole stomach with color texture information generated from a standard monocular endoscope video. Previous works have tried to reconstruct the 3D structures of various organs from endoscope images. However, they are mainly focused on a partial surface. In this work, we investigated how to enable structure-from-motion (SfM) to recon…
DFKI - German Research Center for Artificial Intelligence（德国人工智能研究中心）
This paper demonstrates a system capable of combining a sparse, indirect, monocular visual SLAM, with both offline and real-time Multi-View Stereo (MVS) reconstruction algorithms. This combination overcomes many obstacles encountered by autonomous vehicles or robots employed in agricultural environments, such as overly repetitive patterns, need for very detailed reconstructions, and abrupt movements caused by uneven roads. Furthermore, the use of a monocular SLAM makes our system much easier to integrate with an existing device, as we do not rely on a LiDAR (which is expensive and power consum…
School of Electronics and Communication Engineering, Sun Yat-sen University（中山大学电子与通信工程学院）；University of Western Australia（西澳大利亚大学）；Alibaba Group（阿里巴巴集团）
A main challenge for tasks on panorama lies in the distortion of objects among images. In this work, we propose a Distortion-Aware Monocular Omnidirectional (DAMO) dense depth estimation network to address this challenge on indoor panoramas with two steps. First, we introduce a distortion-aware module to extract calibrated semantic features from omnidirectional images. Specifically, we exploit deformable convolution to adjust its sampling grids to geometric variations of distorted objects on panoramas and then utilize a strip pooling module to sample against horizontal distortion introduced by…
ColonCrafter: A Depth Estimation Model for Colonoscopy Videos Using Diffusion Priors
Department of Biomedical Informatics, Harvard Medical School（生物医学信息学系，哈佛医学院）；Center for Advanced Endoscopy, Beth Israel Deaconess Medical Center（先进内窥镜中心，贝塞斯达医院）
Instituto de Investigación en Ingeniería de Aragón (I3A)（阿拉贡工程研究院（I3A））；Universidad de Zaragoza（萨拉戈萨大学）
Monocular SLAM in deformable scenes will open the way to multiple medical applications like computer-assisted navigation in endoscopy, automatic drug delivery or autonomous robotic surgery. In this paper we propose a novel method to simultaneously track the camera pose and the 3D scene deformation, without any assumption about environment topology or shape. The method uses an illumination-invariant photometric method to track image features and estimates camera motion and deformation combining reprojection error with spatial and temporal regularization of deformations. Our results in simulated…
We present ONCE-3DLanes, a real-world autonomous driving dataset with lane layout annotation in 3D space. Conventional 2D lane detection from a monocular image yields poor performance of following planning and control tasks in autonomous driving due to the case of uneven road. Predicting the 3D lane layout is thus necessary and enables effective and safe driving. However, existing 3D lane detection datasets are either unpublished or synthesized from a simulated environment, severely hampering the development of this field. In this paper, we take steps towards addressing these issues. By exploi…
EndoUIC: Promptable Diffusion Transformer for Unified Illumination Correction in Capsule Endoscopy
The Chinese University of Hong Kong (CUHK)（香港中文大学）；Shenzhen Research Institute, CUHK（香港中文大学深圳研究院）；City University of Hong Kong（香港城市大学）；Centre for Artificial Intelligence and Robotics, HKISI-CAS（中国科学院香港智能科学与健康研究院人工智能与机器人中心）；University College London（伦敦大学学院）；Qilu Hospital of Shandong University（山东大学齐鲁医院）；The University of Sydney（悉尼大学）
针对胶囊内窥镜图像不同曝光水平校正难题，提出可提示扩散 Transformer 框架 EndoUIC 及 CEC 数据集，在多数据集上优于 SOTA 并具临床应用价值。
University of Strasbourg（斯特拉斯堡大学）；CNRS（法国国家科学研究中心）
Background. Flexible bendable instruments are key tools for performing surgical endoscopy. Being able to measure the 3D position of such instruments can be useful for various tasks, such as controlling automatically robotized instruments and analyzing motions. Methods. We propose an automatic method to infer the 3D pose of a single bending section instrument, using only the images provided by a monocular camera embedded at the tip of the endoscope. The proposed method relies on colored markers attached onto the bending section. The image of the instrument is segmented using a graph-based metho…
