Understanding the dynamics of passenger interactions and their epidemiological impact throughout public transportation systems is crucial for both service efficiency and public health. High passenger density and close physical proximity has been shown to accelerate the spread of infectious diseases. During the COVID-19 pandemic, many public transportation companies took measures to slow down and minimize disease spreading. One of these measures was introducing spacing and capacity constraints to public transit vehicles. Our objective is to explore the effects of demand changes and transportation measures from an epidemiological point of view, offering alternative measures to public transportation companies to keep the system alive while minimizing the epidemiological risk as much as possible.
In this paper, we study how interactions between populations impact epidemic spread. We extend the classical SEIR model to include both integration-based disease transmission simulation and population flow. Our model differs from existing ones by having a more detailed representation of travel patterns, without losing tractability. This allows us to study the epidemic consequence of inter-regional travel with high fidelity. In particular, we define \emph{travel cadence} as a two-dimensional measure of inter-regional travel, and show that both dimensions modulate epidemic spread. This technical…
We investigate the spread of diseases, computer viruses or information on complex networks and also immunization strategies to prevent or control the spread. When an entire population cannot be immunized and the effect of immunization is not perfect, we need the targeted immunization with immunization rate. Under such a circumstance we calculate epidemic thresholds for the SIR and SIS epidemic models. It is shown that, in scale-free networks, the targeted immunization is effective only if the immunization rate is equal to one. We analyze here epidemic spreading on directed complex networks, bu…
The impact that information diffusion has on epidemic spreading has recently attracted much attention. As a disease begins to spread in the population, information about the disease is transmitted to others, which in turn has an effect on the spread of disease. In this paper, using empirical results of the propagation of H7N9 and information about the disease, we clearly show that the spreading dynamics of the two-types of processes influence each other. We build a mathematical model in which both types of spreading dynamics are described using the SIS process in order to illustrate the influe…
Nowadays, the emergence of online services provides various multi-relation information to support the comprehensive understanding of the epidemic spreading process. In this Letter, we consider the edge weights to represent such multi-role relations. In addition, we perform detailed analysis of two representative metrics, outbreak threshold and epidemic prevalence, on SIS and SIR models. Both theoretical and simulation results find good agreements with each other. Furthermore, experiments show that, on fully mixed networks, the weight distribution on edges would not affect the epidemic results …
The spread of disease on complex networks has attracted widely attention in the physics community. Recent works have demonstrated that heterogeneous degree and weight distributions have a significant influence on the epidemic dynamics. In this study, a novel edge-weight based compartmental approach is developed to estimate the epidemic threshold and epidemic size (final infected density) on networks with general degree and weight distributions, and a remarkable agreement with numerics is obtained. Even in complex network with the strong heterogeneous degree and weight distributions, this appro…
The customary perspective to reason about epidemic mitigation in temporal networks hinges on the identification of nodes with specific features or network roles. The ensuing individual-based control strategies, however, are difficult to carry out in practice and ignore important correlations between topological and temporal patterns. Here we adopt a mesoscopic perspective and present a principled framework to identify collective features at multiple scales and rank their importance for epidemic spread. We use tensor decomposition techniques to build an additive representation of a temporal net…
Theoretical progress in understanding the dynamics of spreading processes on graphs suggests the existence of an epidemic threshold below which no epidemics form and above which epidemics spread to a significant fraction of the graph. We have observed information cascades on the social media site Digg that spread fast enough for one initial spreader to infect hundreds of people, yet end up affecting only 0.1% of the entire network. We find that two effects, previously studied in isolation, combine cooperatively to drastically limit the final size of cascades on Digg. First, because of the high…
In this work, the aim is to study the spread of a contagious disease and information on a multilayer social system. The main idea is to find a criterion under which the adoption of the spreading information blocks or suppresses the epidemic spread. A two-layer network is the base of the model. The first layer describes the direct contact interactions, while the second layer is the information propagation layer. Both layers consist of the same nodes. The society consists of five different categories of individuals: susceptibles, infective, recovered, vaccinated and precautioned. Initially, only…
It has recently become established that the spread of infectious diseases between humans is affected not only by the pathogen itself but also by changes in behavior as the population becomes aware of the epidemic; for example, social distancing. It is also well known that community structure (the existence of relatively densely connected groups of vertices) in contact networks influences the spread of disease. We propose a set of local strategies for social distancing, based on community structure, that can be employed in the event of an epidemic to reduce the epidemic size. Unlike most social…
We analyze a recently proposed temporal centrality measure applied to an empirical network based on person-to-person contacts in an emergency department of a busy urban hospital. We show that temporal centrality identifies a distinct set of top-spreaders than centrality based on the time-aggregated binarized contact matrix, so that taken together, the accuracy of capturing top-spreaders improves significantly. However, with respect to predicting epidemic outcome, the temporal measure does not necessarily outperform less complex measures. Our results also show that other temporal markers such a…
In the study of disease spreading on empirical complex networks in SIR model, initially infected nodes can be ranked according to some measure of their epidemic impact. The highest ranked nodes, also referred to as "superspreaders", are associated to dominant epidemic risks and therefore deserve special attention. In simulations on studied empirical complex networks, it is shown that the ranking depends on the dynamical regime of the disease spreading. A possible mechanism leading to this dependence is illustrated in an analytically tractable example. In systems where the allocation of resourc…
The compartmental models used to study epidemic spreading often assume the same susceptibility for all individuals, and are therefore, agnostic about the effects that differences in susceptibility can have on epidemic spreading. Here we show that--for the SIS model--differential susceptibility can make networks more vulnerable to the spread of diseases when the correlation between a node's degree and susceptibility are positive, and less vulnerable when this correlation is negative. Moreover, we show that networks become more likely to contain a pocket of infection when individuals are more li…
The epidemic spreading on arbitrary complex networks is studied in SIR (Susceptible Infected Recovered) compartment model. We propose our implementation of a Naive SIR algorithm for epidemic simulation spreading on networks that uses data structures efficiently to reduce running time. The Naive SIR algorithm models full epidemic dynamics and can be easily upgraded to parallel version. We also propose novel algorithm for epidemic simulation spreading on networks called the FastSIR algorithm that has better average case running time than the Naive SIR algorithm. The FastSIR algorithm uses novel …
When an epidemic spreads in a population, individuals may adaptively change the structure of their social contact network to reduce risk of infection. Here we study the spread of an epidemic on an adaptive network with community structure. We model the effect of two communities with different average degrees. The disease model is susceptible-infected-susceptible (SIS), and adaptation is rewiring of links between susceptibles and infectives. The bifurcation structure is obtained, and a mean field model is developed that accurately predicts the steady state behavior of the system. We show that a…
Passenger contact in public transit (PT) networks can be a key mediate in the spreading of infectious diseases. This paper proposes a time-varying weighted PT encounter network to model the spreading of infectious diseases through the PT systems. Social activity contacts at both local and global levels are also considered. We select the epidemiological characteristics of coronavirus disease 2019 (COVID-19) as a case study along with smart card data from Singapore to illustrate the model at the metropolitan level. A scalable and lightweight theoretical framework is derived to capture the time-v…
Attempts to control the epidemic spread of COVID19 in the different countries often involve imposing restrictions to the mobility of citizens. Recent examples demonstrate that the effectiveness of these policies strongly depends on the willingness of the population to adhere them. And this is a parameter that it is difficult to measure and control. We demonstrate in this manuscript a systematic way to check the mood of a society and a way to incorporate it into dynamical models of epidemic propagation. We exemplify the process considering the case of Spain although the results and methodology …
Modeling the amplification of epidemic spread by individuals exposed to misinformation on social media
Luddy School of Informatics, Computing, and Engineering, Indiana University（印第安纳大学卢迪信息、计算与工程学院）；Department of Electronics, Information and Bioengineering, Politecnico di Milano（米兰理工大学电子、信息与生物工程系）
The dynamics of many epidemic compartmental models for infectious diseases that spread in a single host population present a second-order phase transition. This transition occurs as a function of the infectivity parameter, from the absence of infected individuals to an endemic state. Here, we study this transition, from the perspective of dynamical systems, for a discrete-time compartmental epidemic model known as Microscopic Markov Chain Approach, whose applicability for forecasting future scenarios of epidemic spreading has been proved very useful during the COVID-19 pandemic. We show that t…
Knowing which individuals can be more efficient in spreading a pathogen throughout a determinate environment is a fundamental question in disease control. Indeed, over the last years the spread of epidemic diseases and its relationship with the topology of the involved system have been a recurrent topic in complex network theory, taking into account both network models and real-world data. In this paper we explore possible correlations between the heterogeneous spread of an epidemic disease governed by the susceptible-infected-recovered (SIR) model, and several attributes of the originating ve…
A key characteristic of the spread of infectious diseases is their ability to use efficient transmission paths within contact graphs. This enables the pathogen to maximise infection rates and spread within a target population. In this work, we devise techniques to localise infections and decrease infection rates based on a principled analysis of disease transmission paths within human-contact networks (proximity graphs). Experimental results of disease spreading shows that that at low visibility rates contact tracing slows disease spreading. However to stop disease spreading, contact tracing r…
Pathogens can spread epidemically through populations. Beneficial contagions, such as viruses that enhance host survival or technological innovations that improve quality of life, also have the potential to spread epidemically. How do the dynamics of beneficial biological and social epidemics differ from those of detrimental epidemics? We investigate this question using three theoretical approaches. First, in the context of population genetics, we show that a horizontally-transmissible element that increases fitness, such as viral DNA, spreads superexponentially through a population, more quic…
