arXivDaily arXiv每日学术速递 周一至周五更新
arXiv 2309.08481cs.CV

基于单张2D投影和深度监督的对比增强CT图像3D动脉分割

3D Arterial Segmentation via Single 2D Projections and Depth Supervision in Contrast-Enhanced CT Images

Technical University of Munich(慕尼黑工业大学);Imperial College London(帝国理工学院);University of Zurich(苏黎世大学)

Alina F. Dima, Veronika A. Zimmer, Martin J. Menten, Hongwei Bran Li, Markus Graf, Tristan Lemke, Philipp Raffler, Robert Graf, Jan S. Kirschke, Rickmer Braren, Daniel Rueckert

AI总结:

提出一种仅需单张2D投影结合深度监督的3D动脉分割方法,利用深度信息将2D标签映射至3D空间,在对比增强CT图像上几乎消除了3D与2D监督的性能差距并大幅降低标注成本。

摘要:

3D体积中血管的自动分割是许多血管疾病定量诊断和治疗的关键步骤。现有研究主要采用深度学习方法积极探索3D血管分割。然而,训练3D深度网络需要专家提供大量人工3D标注,获取这些标注非常费力。对于3D血管分割尤其如此,因为血管稀疏却分布在许多切片上,在2D切片中可视化时呈现断开状态。在本研究中,我们提出一种新方法,仅通过每张训练图像的一张标注2D投影,结合深度监督,来分割3D胰周动脉。我们在3D对比增强CT图像上对胰周动脉分割进行了大量实验,展示了如何从2D投影中捕获丰富的深度信息。我们证明,为每个训练样本标注单张随机选择的投影,即可获得与标注多张2D投影相当的性能,从而减少了标注工作量。此外,通过利用深度信息将2D标签映射到3D空间并将其纳入训练,我们几乎弥合了3D监督与2D监督之间的性能差距。我们的代码可在 https://github.com/alinafdima/3Dseg-mip-depth 获取。

英文摘要:

Automated segmentation of the blood vessels in 3D volumes is an essential step for the quantitative diagnosis and treatment of many vascular diseases. 3D vessel segmentation is being actively investigated in existing works, mostly in deep learning approaches. However, training 3D deep networks requires large amounts of manual 3D annotations from experts, which are laborious to obtain. This is especially the case for 3D vessel segmentation, as vessels are sparse yet spread out over many slices and disconnected when visualized in 2D slices. In this work, we propose a novel method to segment the 3D peripancreatic arteries solely from one annotated 2D projection per training image with depth supervision. We perform extensive experiments on the segmentation of peripancreatic arteries on 3D contrast-enhanced CT images and demonstrate how well we capture the rich depth information from 2D projections. We demonstrate that by annotating a single, randomly chosen projection for each training sample, we obtain comparable performance to annotating multiple 2D projections, thereby reducing the annotation effort. Furthermore, by mapping the 2D labels to the 3D space using depth information and incorporating this into training, we almost close the performance gap between 3D supervision and 2D supervision. Our code is available at: https://github.com/alinafdima/3Dseg-mip-depth.

机构、总结、中文摘要均由AI分析而来,可能存在错误,请以论文正文为准。

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