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arXiv 2201.13378q-bio.NCq-bio.QM
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用于提升功能磁共振成像中功能连接与有效连接的可重复性和可靠性的新型机器学习方法

Novel Machine Learning Approaches for Improving the Reproducibility and Reliability of Functional and Effective Connectivity from Functional MRI

Cooper J. Mellema, Albert Montillo

AI总结:

针对功能磁共振成像传统脑连接测量方法无法捕捉非线性关联的问题,研究提出基于机器学习的功能连接指标和结构投影格兰杰因果有效连接指标,在人类连接组计划数据上验证了其高可重复性和个体特质预测能力。

摘要:

目的:需要新的人脑连接测量指标来弥补现有测量方法的不足,推动脑功能、认知能力研究,并识别人类疾病的早期标志物。功能磁共振成像中测量脑区对之间功能连接的传统方法,如相关分析和偏相关分析,无法捕捉脑区关联中的非线性特征。我们提出了一种基于机器学习的新型功能连接测量方法,可有效捕捉线性和非线性特征。方法:我们提出了两种新的有效连接(EC)测量指标。第一种是基于机器学习的有效连接测量指标,可捕捉全脑范围的非线性特征。第二种是结构投影格兰杰因果关系(Structurally Projected Granger Causality, SP.GC),它对格兰杰因果连接进行调整,以高效表征并正则化全脑有效连接组,使其符合潜在的生物结构连接特性。我们将所提出的测量指标与传统测量指标在可重复性和个体特质预测能力方面进行比较,以证明这些指标的内部效度。我们使用来自人类连接组计划(Human Connectome Project)的同一受试者的四次重复扫描数据,测量这些指标预测受试者生理和认知特质的能力。主要结果:所提出的新型功能连接测量指标ML.FC实现了高可重复性,R平方值为0.44;而所提出的有效连接测量指标SP.GC取得了最高的预测能力,R平方值为0.66。意义:所提出的方法非常适合实现高可重复性和预测性。

英文摘要:

Objective: New measures of human brain connectivity are needed to address gaps in the existing measures and facilitate the study of brain function, cognitive capacity, and identify early markers of human disease. Traditional approaches to measure functional connectivity between pairs of brain regions in functional MRI, such as correlation and partial correlation, fail to capture nonlinear aspects in the regional associations. We propose a new machine learning based measure of functional connectivity which efficiently captures linear and nonlinear aspects. Approach: We propose two new EC measures. The first, a machine learning based measure of effective connectivity, measures nonlinear aspects across the entire brain. The second, Structurally Projected Granger Causality adapts Granger Causal connectivity to efficiently characterize and regularize the whole brain EC connectome to respect underlying biological structural connectivity. The proposed measures are compared to traditional measures in terms of reproducibility and the ability to predict individual traits in order to demonstrate these measures internal validity. We use four repeat scans of the same individuals from the Human Connectome Project and measure the ability of the measures to predict individual subject physiologic and cognitive traits. Main results: The proposed new FC measure of ML.FC attains high reproducibility with an R squared of 0.44, while the proposed EC measure of SP.GC attains the highest predictive power with an R squared of 0.66. Significance: The proposed methods are highly suitable for achieving high reproducibility and predictiveness.

机构、总结、中文摘要均由AI分析而来,可能存在错误,请以论文正文为准。

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