For a connected cobordism S between two knots K1,K2 in S3, we establish an inequality involving the number of local maxima, the genus of S, and the torsion orders of Kht(K1),Kht(K2), where Kht denotes Lee's perturbation of Khovanov homology. This shows that the torsion order gives a lower bound for the band-unlinking number.
In this paper, we study the (in)sensitivity of the Khovanov functor to four-dimensional linking of surfaces. We prove that if $L$ and $L'$ are split links, and $C$ is a cobordism between $L$ and $L'$ that is the union of disjoint (but possibly linked) cobordisms between the components of $L$ and the components of $L'$, then the map on Khovanov homology induced by $C$ is completely determined by the maps induced by the individual components of $C$ and does not detect the linking between the components. As a corollary, we prove that a strongly homotopy-ribbon concordance (i.e., a concordance who…
We show that the cobordism maps on Khovanov homology can distinguish smooth surfaces in the 4-ball that are exotically knotted (i.e., isotopic through ambient homeomorphisms but not ambient diffeomorphisms). We develop new techniques for distinguishing cobordism maps on Khovanov homology, drawing on knot symmetries and braid factorizations. We also show that Plamenevskaya's transverse invariant in Khovanov homology is preserved by maps induced by positive ascending cobordisms.
We reconsider the su(3) link homology theory defined by Khovanov in math.QA/0304375 and generalized by Mackaay and Vaz in math.GT/0603307. With some slight modifications, we describe the theory as a map from the planar algebra of tangles to a planar algebra of (complexes of) `cobordisms with seams' (actually, a `canopolis'), making it local in the sense of Bar-Natan's local su(2) theory of math.GT/0410495. We show that this `seamed cobordism canopolis' decategorifies to give precisely what you'd both hope for and expect: Kuperberg's su(3) spider defined in q-alg/9712003. We conjecture an answe…
In this paper, we discuss degree 0 crossing change on Khovanov homology in terms of cobordisms. Namely, using Bar-Natan's formalism of Khovanov homology, we introduce a sum of cobordisms that yields a morphism on complexes of two diagrams of crossing change, which we call the "genus-one morphism." It is proved that the morphism is invariant under the moves of double points in tangle diagrams. As a consequence, in the spirit of Vassiliev theory, taking iterated mapping cones, we obtain an invariant for singular tangles that extending sl(2) tangle homology; examples include Lee homology, Bar-Nat…
We construct a bigraded (co)homology theory which depends on a parameter a, and whose graded Euler characteristic is the quantum sl(2) link invariant. We follow Bar-Natan's approach to tangles on one side, and Khovanov's sl(3) theory for foams on the other side. Our theory is properly functorial under tangle cobordisms, and a version of the Khovanov sl(2) invariant (or Lee's modification of it) corresponds to a=0 (or a=1). In particular, our construction naturally resolves the sign ambiguity in the functoriality of Khovanov's sl(2) homology theory.
Symplectic Khovanov homology is an invariant of oriented links defined by Seidel and Smith and conjectured to be isomorphic to Khovanov homology. I define morphisms (up to a global sign ambiguity) between symplectic Khovanov homology groups, corresponding to isotopy classes of smooth link cobordisms in 4D between a fixed pair of links. These morphisms define a functor from the category of links and such cobordisms to the category of abelian groups and group homomorphisms up to a sign ambiguity. This provides an extra structure for symplectic Khovanov homology and more generally an isotopy inva…
Lobb observed in [arXiv:1103.1412] that each equivariant sl(N) Khovanov-Rozansky homology over C[a] admits a standard decomposition of a simple form. In the present paper, we derive a formula for the corresponding Lee-Gornik spectral sequence in terms of this decomposition. Based on this formula, we give a simple alternative definition of the Lee-Gornik spectral sequence using exact couples. We also demonstrate that an equivariant sl(N) Khovanov-Rozansky homology over C[a] can be recovered from the corresponding Lee-Gornik spectral sequence via this formula. Therefore, these two algebraic inva…
The paper contains an essentially self-contained treatment of Khovanov homology, Khovanov-Lee homology as well as the Rasmussen invariant for virtual knots and virtual knot cobordisms which directly applies to classical knot and classical knot cobordisms. To do so, we give an alternate formulation for the Manturov definition of Khovanov homology for virtual knots and links with arbitrary coefficients. This approach uses cut loci on the knot diagram to induce a conjugation operator in the Frobenius algebra. We then discuss the implications of the maps induced in the aforementioned theory to the…
We extend Bar-Natan's cobordism based categorification of the Jones polynomial to virtual links. Our topological complex allows a direct extension of the classical Khovanov complex ($h=t=0$), the variant of Lee ($h=0,t=1$) and other classical link homologies. We show that our construction allows, over rings of characteristic two, extensions with no classical analogon, e.g. Bar-Natan's $\mathbb{Z}/2$-link homology can be extended in two non-equivalent ways. Our construction is computable in the sense that one can write a computer program to perform calculations, e.g. we have written a Mathemati…
In [Duke Math. J. 101 (1999) 359-426], Mikhail Khovanov constructed a homology theory for oriented links, whose graded Euler characteristic is the Jones polynomial. He also explained how every link cobordism between two links induces a homomorphism between their homology groups, and he conjectured the invariance (up to sign) of this homomorphism under ambient isotopy of the link cobordism. In this paper we prove this conjecture, after having made a necessary improvement on its statement. We also introduce polynomial Lefschetz numbers of cobordisms from a link to itself such that the Lefschetz …
We study the maps induced on link Floer homology by elementary decorated link cobordisms. We compute these for births, deaths, stabilizations, and destabilizations, and show that saddle cobordisms can be computed in terms of maps in a decorated skein exact triangle that extends the oriented skein exact triangle in knot Floer homology. In particular, we completely determine the Alexander and Maslov grading shifts. As a corollary, we compute the maps induced by elementary cobordisms between unlinks. We show that these give rise to a $(1+1)$-dimensional TQFT that coincides with the reduced Khovan…
We give a fresh introduction to the Khovanov Homology theory for knots and links, with special emphasis on its extension to tangles, cobordisms and 2-knots. By staying within a world of topological pictures a little longer than in other articles on the subject, the required extension becomes essentially tautological. And then a simple application of an appropriate functor (a `TQFT') to our pictures takes them to the familiar realm of complexes of (graded) vector spaces and ordinary homological invariants.
We give a simple proof of Lee's result from [Adv. Math. 179 (2005) 554-586; arXiv:math.GT/0210213], that the dimension of the Lee variant of the Khovanov homology of a c-component link is 2^c, regardless of the number of crossings. Our method of proof is entirely local and hence we can state a Lee-type theorem for tangles as well as for knots and links. Our main tool is the "Karoubi envelope of the cobordism category", a certain enlargement of the cobordism category which is mild enough so that no information is lost yet strong enough to allow for some simplifications that are otherwise unavai…
This paper is devoted to the study of algebraic structures leading to link homology theories. The originally used structures of Frobenius algebra and/or TQFT are modified in two directions. First, we refine 2-dimensional cobordisms by taking into account their embedding into the three space. Secondly, we extend the underlying cobordism category to a 2-category, where the usual relations hold up to 2-isomorphisms. The corresponding abelian 2-functor is called an extended quantum field theory (EQFT). We show that the Khovanov homology, the nested Khovanov homology, extracted by Stroppel and Webs…
We create a framework for odd Khovanov homology in the spirit of Bar-Natan's construction for the ordinary Khovanov homology. Namely, we express the cube of resolutions of a link diagram as a diagram in a certain 2-category of chronological cobordisms and show that it is 2-commutative: the composition of 2-morphisms along any 3-dimensional subcube is trivial. This allows us to create a chain complex, whose homotopy type modulo certain relations is a link invariant. Both the original and the odd Khovanov homology can be recovered from this construction by applying certain strict 2-functors. We …
We consider colored operads and their actions on categories. As a special example we construct a cobordism category with a colored operad action arising from oriented planar arc diagrams. This is used to construct an invariant of oriented tangle diagrams with values in the homotopy category attached to the cobordism category. Motivated by Bar-Natan's categorification of the Jones polynomial, it categorifies the quantum $sl_n$ quantum invariants and is adapted to the categorification of the $sl_n$ quantum invariants by Khovanov and Rozansky using matrix factorizations. We conjecture to exist th…
There are two categorifications of the Jones polynomial: "even" discovered by M.Khovanov in 1999 and "odd" dicovered by P.Ozsvath, J.Rasmussen and Z.Szabo in 2007. The first one can be fully constructed in the category of cobordisms (strictly: in the additive closure of that category), where we can build a complex for a given tangle and show its invariance under Reidemeister moves. The even link homology is given by a monoidal functor from cobordisms into modules. However, odd link homology cannot be obtained in this way. In this paper I fill this gap. I enrich cobordisms with chronologies (pr…
We introduce the notion of a Khovanov-Floer theory. Roughly, such a theory assigns a filtered chain complex over Z/2 to a link diagram such that (1) the E_2 page of the resulting spectral sequence is naturally isomorphic to the Khovanov homology of the link; (2) this filtered complex behaves nicely under planar isotopy, disjoint union, and 1-handle addition; and (3) the spectral sequence collapses at the E_2 page for any diagram of the unlink. We prove that a Khovanov-Floer theory naturally yields a functor from the link cobordism category to the category of spectral sequences. In particular, …
We prove that the Khovanov-Lee complex of an oriented link, L, in a thickened annulus, A x I, has the structure of a bifiltered complex whose filtered chain homotopy type is an invariant of the isotopy class of L in A x I. Using ideas of Ozsvath-Stipsicz-Szabo as reinterpreted by Livingston, we use this structure to define a family of annular Rasmussen invariants that yield information about annular and non-annular cobordisms. Focusing on the special case of annular links obtained as braid closures, we use the behavior of the annular Rasmussen invariants to obtain a necessary condition for bra…
We describe a modification of Khovanov homology (math.QA/9908171), in the spirit of Bar-Natan (math.GT/0410495), which makes the theory properly functorial with respect to link cobordisms. This requires introducing `disorientations' in the category of smoothings and abstract cobordisms between them used in Bar-Natan's definition. Disorientations have `seams' separating oppositely oriented regions, coming with a preferred normal direction. The seams satisfy certain relations (just as the underlying cobordisms satisfy relations such as the neck cutting relation). We construct explicit chain maps…
Based on the results of the second author, we define an equivariant version of Lee and Bar-Natan homology for periodic links and show that there exists an equivariant spectral sequence from the equivariant Khovanov homology to equivariant Lee homology. As a result we obtain new obstructions for a link to be periodic. These obstructions generalize previous results of Przytycki and of the second author.
This paper is an introduction to Khovanov homology, starting with the Kauffman bracket state summation, emphasizing the Bar-Natan Canopoloy and tangle cobordism approach. The paper discusses a simplicial approach to Khovanov homology and a quantum model for it so that the graded Euler characteristic that produces the Jones polynomial from Khovanov homology becomes the trace of a unitary transformation on a Hilbert space associated with the Khovanov Homology.
In this paper we compute the signature for a family of knots $W(k,n)$, the weaving knots of type $(k,n)$. By work of E.~S.~Lee the signature calculation implies a vanishing theorem for the Khovanov homology of weaving knots. Specializing to knots $W(3,n)$, we develop recursion relations that enable us to compute the Jones polynomial of $W(3,n)$. Using additional results of Lee, we compute the ranks of the Khovanov Homology of these knots. At the end we provide evidence for our conjecture that, asymptotically, the ranks of Khovanov Homology of $W(3,n)$ are {\it normally distributed}.
Khovanov introduced a cohomology theory for oriented classical links whose graded Euler characteristic is the Jones polynomial. Since Khovanov's theory is functorial for link cobordisms between classical links, we obtain an invariant of a surface-knot, called the {\it Khovanov-Jacobsson number}, by considering the surface-knot as a link cobordism between empty links. In this paper, we define an invariant of a surface-knot which is a generalization of the Khovanov-Jacobsson number by using Bar-Natan's theory, and prove that any $T^2$-knot has the trivial Khovanov-Jacobsson number.
We use a special kind of 2-dimensional extended Topological Quantum Field Theories (TQFTs), so-called open-closed TQFTs, in order to extend Khovanov homology from links to arbitrary tangles, not necessarily even. For every plane diagram of an oriented tangle, we construct a chain complex whose homology is invariant under Reidemeister moves. The terms of this chain complex are modules of a suitable algebra A such that there is one action of A or A^op for every boundary point of the tangle. We give examples of such algebras A for which our tangle homology theory reduces to the link homology theo…
Khovanov homology ist a new link invariant, discovered by M. Khovanov, and used by J. Rasmussen to give a combinatorial proof of the Milnor conjecture. In this thesis, we give examples of mutant links with different Khovanov homology. We prove that Khovanov's chain complex retracts to a subcomplex, whose generators are related to spanning trees of the Tait graph, and we exploit this result to investigate the structure of Khovanov homology for alternating knots. Further, we extend Rasmussen's invariant to links. Finally, we generalize Khovanov's categorifications of the colored Jones polynomial…
We extend the cobordism based categorification of the virtual Jones polynomial to virtual tangles. This extension is combinatorial and has semi-local properties. We use the semi-local property to prove an applications, i.e. we give a discussion of Lee's degeneration of virtual homology.
We provide a unified framework for proving Reidemeister-invariance and functoriality for a wide range of link homology theories. These include Lee homology, Heegaard Floer homology of branched double covers, singular instanton homology, and \Szabo's geometric link homology theory. We follow Baldwin, Hedden, and Lobb (arXiv:1509.04691) in leveraging the relationships between these theories and Khovanov homology. We obtain stronger functoriality results by avoiding spectral sequences and instead showing that each theory factors through Bar-Natan's cobordism-theoretic link homology theory.
We study a notion of distance between knots, defined in terms of the number of saddles in ribbon concordances connecting the knots. We construct a lower bound on this distance using the X-action on Lee's perturbation of Khovanov homology.
We give asymptotically sharp upper bounds for the Khovanov width and the dealternation number of positive braid links, in terms of their crossing number. The same braid-theoretic technique, combined with Ozsváth, Stipsicz, and Szabó's Upsilon invariant, allows us to determine the exact cobordism distance between torus knots with braid index two and six.
We construct the concordance invariant coming from the $E(-1)$ spectral sequence on Khovanov homology in the same way Rasmussen's $s$ invariant comes from the Lee spectral sequence, and show that it gives a bound on the nonorientable slice genus.
Blanchet introduced certain singular cobordisms to fix the functoriality of Khovanov homology. In this paper we introduce graded algebras consisting of such singular cobordisms à la Blanchet. As the main result we give algebraic versions of these algebras using the combinatorics of arc diagrams.
Using the diagrammatic calculus for Soergel bimodules developed by B. Elias and M. Khovanov, we show that Rouquier complexes are functorial over braid cobordisms. We explicitly describe the chain maps which correspond to movie move generators.
We prove that Morrison and Nieh's categorification of the su(3) quantum knot invariant is functorial with respect to tangle cobordisms. This is in contrast to the categorified su(2) theory, which was not functorial as originally defined. We use methods of Bar-Natan to construct explicit chain maps for each variation of the third Reidemeister move. Then, to show functoriality, we modify arguments used by Clark, Morrison, and Walker to show that induced chain maps are invariant under Carter and Saito's movie moves.
In this paper we prove that every Khovanov homology associated to a Frobenius algebra of rank $2$ can be modified in such a way as to produce a TQFT on oriented links, that is a monoidal functor from the category of cobordisms of oriented links to the homotopy category of complexes.
By considering a version of Khovanov homology incorporating both the Lee and $E(-1)$ differentials, we construct a $1$-parameter family of concordance homomorphisms similar to the Upsilon invariant from knot Floer homology. This invariant gives lower bounds on the slice genus and can be used to prove that certain infinite families of pretzel knots are linearly independent in the smooth concordance group.
We define a homology theory of virtual links built out of the direct sum of the standard Khovanov complex with itself, motivating the name doubled Khovanov homology. We demonstrate that it can be used to show that some virtual links are non-classical, and that it yields a condition on a virtual knot being the connect sum of two unknots. Further, we show that doubled Khovanov homology possesses a perturbation analogous to that defined by Lee in the classical case and define a doubled Rasmussen invariant. This invariant is used to obtain various cobordism obstructions; in particular it is an obs…
We describe a "concentration on the diagonal" condition on the Khovanov complex of tangles, show that this condition is satisfied by the Khovanov complex of the single crossing tangles, and prove that it is preserved by alternating planar algebra compositions. Hence, this condition is satisfied by the Khovanov complex of all alternating tangles. Finally, in the case of links, our condition is equivalent to a well known result which states that the Khovanov homology of a non-split alternating link is supported on two diagonals. Thus our condition is a generalization of Lee's Theorem to the case…
This paper begins with a survey of some applications of Khovanov homology to low-dimensional topology, with an eye toward extending these results to $\mathfrak{sl}(n)$ homologies. We extend Levine and Zemke's ribbon concordance obstruction from Khovanov homology to $\mathfrak{sl}(n)$ homology for $n \geq 2$, including the universal $\mathfrak{sl}(2)$ and $\mathfrak{sl}(3)$ homology theories. Inspired by Alishahi and Dowlin's bounds for the unknotting number coming from Khovanov homology and relying on spectral sequence arguments, we produce bounds on the alternation number of a knot. Lee and B…
We use the knot homology of Khovanov and Lee to construct link concordance invariants generalizing the Rasmussen $s$-invariant of knots. The relevant invariant for a link is a filtration on a vector space of dimension $2^{|L|}$. The basic properties of the $s$-invariant all extend to the case of links; in particular, any orientable cobordism $Σ$ between links induces a map between their corresponding vector spaces which is filtered of degree $χ(Σ)$. A corollary of this construction is that any component preserving orientable cobordism from a $\Kh$-thin link to a link split into $k$ components …
A homological invariant of 3-manifolds is defined, using abelian Yang-Mills gauge theory. It is shown that the construction, in an appropriate sense, is functorial with respect to the families of 4-dimensional cobordisms. This construction and its functoriality are used to define several link invariants. The strongest version of these invariants has the form of a filtered chain complex that can recover Khovanov homology of the mirror image as a bi-graded group.