Surrogate endpoint (SE) for overall survival in cancer patients is essential to improving the efficiency of oncology drug development. In practice, we may discover a new patient level association with survival, based on one or more clinical or biological features, in a discovery cohort; and then measure the trial level association across studies in a meta-analysis to validate the SE. To understand how well various patient level metrics would indicate the eventual trial level association, we considered causal biological trajectories based on bi-exponential functions, modeled the strength of their impact on survival hazards via a parameter α, and simulated the trajectories and survival times in randomized trials simultaneously. We set an early time point in the trials when the trajectory measurement became the SE value. From simulated discovery cohorts, we compared patient level metrics including C index, integrated brier score, and log hazard ratio between SE values and survival times. We assembled multiple simulated studies to enable meta-analyses to estimate the trial level association. Across all the simulation scenarios considered here, we found tight correlations among the three patient level metrics and similar correlations between any of them and the trial level metric. Despite the continual increase in α, both patient and trial level metrics often plateaued together; their association always decreased quickly as α increased. This suggests that incorporating additional biological factors into a composite SE is likely to have diminishing returns on improving both patient level and trial level association.
The primary objective of phase I oncology studies is to establish the safety profile of a new treatment and determine the maximum tolerated dose (MTD). This is motivated by the development of cytotoxic agents based on the underlying assumption that the higher the dose, the greater the likelihood of efficacy and toxicity. However, evidence from the recent development of cancer immunotherapies that aim to stimulate patients' immune systems to fight cancer challenges this assumption, particularly further escalation after a certain dose level might not necessarily increase the efficacy. Dose escal…
An unprecedented number of new cancer targets are in development, and most are being developed in combination therapies. Early oncology development is strategically challenged in choosing the best combinations to move forward to late stage development. The most common early endpoints to be assessed in such decision-making include objective response rate, duration of response and tumor size change. In this paper, using independent-drug-action and Bliss-drug-independence concepts as a foundation, we introduce simple models to predict combination therapy efficacy for duration of response and tumo…
A Bayesian hierarchical mixture cure modelling framework to utilize multiple survival datasets for long-term survivorship estimates: A case study from previously untreated metastatic melanoma
UCL（伦敦大学学院）；Bristol Myers Squibb（百时美施贵宝）；The Royal Marsden Hospital（皇家马斯登医院）
Purpose: PFS is often used as a surrogate endpoint for OS in metastatic breast cancer studies. We have evaluated the association of treatment effect on PFS with significant HR$_{OS}$ (and how this association is affected by other factors) in published prospective metastatic breast cancer studies. Methods: A systematic literature search in PubMed identified prospective metastatic breast cancer studies. Treatments effects on PFS were determined using hazard ratio (HR$_{PFS}$), increase in median PFS ($Δ$MED$_{PFS}$) and % increase in median PFS (%$Δ$MED$_{PFS}$). Diagnostic accuracy of PFS measu…
Efforts to develop biomarker-targeted anti-cancer therapies have progressed rapidly in recent years. Six antibodies acting on programmed death ligand 1 or programmed death 1 pathways were approved in 75 cancer indications between 2015 and 2021. With efforts to expedite regulatory reviews of promising therapies, several targeted cancer therapies have been granted accelerated approval on the basis of single-arm phase II trials. And yet, in the absence of randomization, patient outcomes may not have been studied under standard of care chemotherapies for emerging biomarker subpopulations prior to …
This article summarizes the discussions from the American Statistical Association (ASA) Biopharmaceutical (BIOP) Section Open Forum that took place on December 10, 2020 and was organized by the ASA BIOP Statistical Methods in Oncology Scientific Working Group, in coordination with the US FDA Oncology Center of Excellence. Diverse stakeholders including experts from international regulatory agencies, academicians, and representatives of the pharmaceutical industry engaged in a discussion on the use of non-concurrent control in Master Protocols for oncology trials. While the use of non-concurren…
The recent 21st Century Cures Act propagates innovations to accelerate the discovery, development, and delivery of 21st century cures. It includes the broader application of Bayesian statistics and the use of evidence from clinical expertise. An example of the latter is the use of trial-external (or historical) data, which promises more efficient or ethical trial designs. We propose a Bayesian meta-analytic approach to leveraging historical data for time-to-event endpoints, which are common in oncology and cardiovascular diseases. The approach is based on a robust hierarchical model for piecew…
Objective: Traditionally validation of surrogate endpoints has been carried out using RCT data. However, RCT data may be too limited to validate surrogate endpoints. In this paper, we sought to improve validation of surrogate endpoints with the inclusion of real world evidence (RWE). Study Design and Setting: We use data from comparative RWE (cRWE) and single arm RWE (sRWE), to supplement RCT evidence for evaluation of progression free survival (PFS) as a surrogate endpoint to overall survival (OS) in metastatic colorectal cancer (mCRC). Treatment effect estimates from RCTs, cRWE and matched s…
University of Potsdam（波茨坦大学）；Institute of Mathematics（数学研究所）；Institute of Pharmacy（药剂学研究所）
Model-informed precision dosing (MIPD) using therapeutic drug/biomarker monitoring offers the opportunity to significantly improve the efficacy and safety of drug therapies. Current strategies comprise model-informed dosing tables or are based on maximum a-posteriori estimates. These approaches, however, lack a quantification of uncertainty and/or consider only part of the available patient-specific information. We propose three novel approaches for MIPD employing Bayesian data assimilation (DA) and/or reinforcement learning (RL) to control neutropenia, the major dose-limiting side effect in a…
Toward Valid Generative Clinical Trial Data with Survival Endpoints
Inria（法国国家信息与自动化技术研究院）；Université Paris Cité（巴黎城市大学）；Inserm（法国国家卫生研究院）；HeKA；AP-HP（巴黎大学医院）；Hôpital Européen Georges Pompidou（乔治·蓬皮杜欧洲医院）；Unité de Recherche Clinique APHP（APHP临床研究中心）；CIC1418（临床研究1418中心）；Epidémiologie Clinique Paris France（巴黎流行病学临床研究中心）
A personalized Uncertainty Quantification framework for patient survival models: estimating individual uncertainty of patients with metastatic brain tumors in the absence of ground truth
When choosing estimands and estimators in randomized clinical trials, caution is warranted as intercurrent events, such as - due to patients who switch treatment after disease progression, are often extreme. Statistical analyses may then easily lure one into making large implicit extrapolations, which often go unnoticed. We will illustrate this problem of implicit extrapolations using a real oncology case study, with a right-censored time-to-event endpoint, in which patients can cross over from the control to the experimental treatment after disease progression, for ethical reasons. We resolve…
Basket trials have emerged as a new class of efficient approaches in oncology to evaluate a new treatment in several patient subgroups simultaneously. In this paper, we extend the key ideas to disease areas outside of oncology, developing a robust Bayesian methodology for randomised, placebo-controlled basket trials with a continuous endpoint to enable borrowing of information across subtrials with similar treatment effects. After adjusting for covariates, information from a complementary subtrial can be represented into a commensurate prior for the parameter that underpins the subtrial under …
The call for patient-focused drug development is loud and clear, as expressed in the 21st Century Cures Act and in recent guidelines and initiatives of regulatory agencies. Among the factors contributing to modernized drug development and improved health-care activities are easily interpretable measures of clinical benefit. In addition, special care is needed for cancer trials with time-to-event endpoints if the treatment effect is not constant over time. We propose the predictive individual effect which is a patient-centric and tangible measure of clinical benefit under a wide variety of scen…
