Assigning meaning to parts of image data is the goal of semantic image segmentation. Machine learning methods, specifically supervised learning is commonly used in a variety of tasks formulated as semantic segmentation. One of the major challenges in the supervised learning approaches is expressing and collecting the rich knowledge that experts have with respect to the meaning present in the image data. Towards this, typically a fixed set of labels is specified and experts are tasked with annotating the pixels, patches or segments in the images with the given labels. In general, however, the set of classes does not fully capture the rich semantic information present in the images. For example, in medical imaging such as histology images, the different parts of cells could be grouped and sub-grouped based on the expertise of the pathologist.
To achieve such a precise semantic representation of the concepts in the image, we need access to the full depth of knowledge of the annotator. In this work, we develop a novel approach to collect segmentation annotations from experts based on psychometric testing. Our method consists of the psychometric testing procedure, active query selection, query enhancement, and a deep metric learning model to achieve a patch-level image embedding that allows for semantic segmentation of images. We show the merits of our method with evaluation on the synthetically generated image, aerial image and histology image.
Knowledge present in a domain is well expressed as relationships between corresponding concepts. For example, in zoology, animal species form complex hierarchies; in genomics, the different (parts of) molecules are organized in groups and subgroups based on their functions; plants, molecules, and astronomical objects all form complex taxonomies. Nevertheless, when applying supervised machine learning (ML) in such domains, we commonly reduce the complex and rich knowledge to a fixed set of labels, and induce a model shows good generalization performance with respect to these labels. The main re…
TreeGaussian: Tree-Guided Cascaded Contrastive Learning for Hierarchical Consistent 3D Gaussian Scene Segmentation and Understanding
Institute of Computing Technology, Chinese Academy of Sciences（中国科学院计算技术研究所）；University of Chinese Academy of Sciences（中国科学院大学）；Beihang University（北京航空航天大学）
Hierarchical clustering is an effective and efficient approach widely used for classical image segmentation methods. However, many existing methods using neural networks generate segmentation masks directly from per-pixel features, complicating the architecture design and degrading the interpretability. In this work, we propose a simpler, more interpretable architecture, called HCFormer. HCFormer accomplishes image segmentation by bottom-up hierarchical clustering and allows us to interpret, visualize, and evaluate the intermediate results as hierarchical clustering results. HCFormer can addre…
MINES ParisTech（巴黎矿业学院）；PSL Research University（巴黎文理研究大学）
Image segmentation is the process of partitioning an image into a set of meaningful regions according to some criteria. Hierarchical segmentation has emerged as a major trend in this regard as it favors the emergence of important regions at different scales. On the other hand, many methods allow us to have prior information on the position of structures of interest in the images. In this paper, we present a versatile hierarchical segmentation method that takes into account any prior spatial information and outputs a hierarchical segmentation that emphasizes the contours or regions of interest …
Hierarchical image segmentation provides region-oriented scalespace, i.e., a set of image segmentations at different detail levels in which the segmentations at finer levels are nested with respect to those at coarser levels. Most image segmentation algorithms, such as region merging algorithms, rely on a criterion for merging that does not lead to a hierarchy, and for which the tuning of the parameters can be difficult. In this work, we propose a hierarchical graph based image segmentation relying on a criterion popularized by Felzenzwalb and Huttenlocher. We illustrate with both real and syn…
GeoGuide: Hierarchical Geometric Guidance for Open-Vocabulary 3D Semantic Segmentation
University of Science and Technology of China（中国科学技术大学）；National Key Laboratory of Deep Space Exploration, Deep Space Exploration Laboratory（深空探测全国重点实验室，深空探测实验室）
While deeply supervised networks are common in recent literature, they typically impose the same learning objective on all transitional layers despite their varying representation powers. In this paper, we propose Hierarchically Supervised Semantic Segmentation (HS3), a training scheme that supervises intermediate layers in a segmentation network to learn meaningful representations by varying task complexity. To enforce a consistent performance vs. complexity trade-off throughout the network, we derive various sets of class clusters to supervise each transitional layer of the network. Furtherm…
Preferred Networks, Inc.（首选网络公司）；Toyota Research Institute（丰田研究院）
Panoptic segmentation brings together two separate tasks: instance and semantic segmentation. Although they are related, unifying them faces an apparent paradox: how to learn simultaneously instance-specific and category-specific (i.e. instance-agnostic) representations jointly. Hence, state-of-the-art panoptic segmentation methods use complex models with a distinct stream for each task. In contrast, we propose Hierarchical Lovász Embeddings, per pixel feature vectors that simultaneously encode instance- and category-level discriminative information. We use a hierarchical Lovász hinge loss to …
Domain adaptive panoptic segmentation aims to mitigate data annotation challenge by leveraging off-the-shelf annotated data in one or multiple related source domains. However, existing studies employ two separate networks for instance segmentation and semantic segmentation which lead to excessive network parameters as well as complicated and computationally intensive training and inference processes. We design UniDAformer, a unified domain adaptive panoptic segmentation transformer that is simple but can achieve domain adaptive instance segmentation and semantic segmentation simultaneously wit…
University of California San Diego（加州大学圣迭戈分校）；Schlumberger Technology Center（斯伦贝谢技术中心）
This paper proposes a novel method for segmentation of images by hierarchical multilevel thresholding. The method is global, agglomerative in nature and disregards pixel locations. It involves the optimization of the ratio of the unbiased estimators of within class to between class variances. We obtain a recursive relation at each step for the variances which expedites the process. The efficacy of the method is shown in a comparison with some well-known methods.
St. Petersburg Institute for Informatics and Automation of RAS（俄罗斯科学院圣彼得堡信息学与自动化研究所）
In the paper a piecewise constant image approximations of sequential number of pixel clusters or segments are treated. A majorizing of optimal approximation sequence by hierarchical sequence of image approximations is studied. Transition from pixel clustering to image segmentation by reducing of segment numbers in clusters is provided. Algorithms are proved by elementary formulas.
Stanford University（斯坦福大学）；University of California San Diego（加州大学圣迭戈分校）；Simon Fraser University（西蒙弗雷泽大学）；Intel AI Lab（英特尔人工智能实验室）
We present PartNet: a consistent, large-scale dataset of 3D objects annotated with fine-grained, instance-level, and hierarchical 3D part information. Our dataset consists of 573,585 part instances over 26,671 3D models covering 24 object categories. This dataset enables and serves as a catalyst for many tasks such as shape analysis, dynamic 3D scene modeling and simulation, affordance analysis, and others. Using our dataset, we establish three benchmarking tasks for evaluating 3D part recognition: fine-grained semantic segmentation, hierarchical semantic segmentation, and instance segmentatio…
This paper investigates one of the most fundamental computer vision problems: image segmentation. We propose a supervised hierarchical approach to object-independent image segmentation. Starting with over-segmenting superpixels, we use a tree structure to represent the hierarchy of region merging, by which we reduce the problem of segmenting image regions to finding a set of label assignment to tree nodes. We formulate the tree structure as a constrained conditional model to associate region merging with likelihoods predicted using an ensemble boundary classifier. Final segmentations can then …
3D semantic segmentation is a fundamental building block for several scene understanding applications such as autonomous driving, robotics and AR/VR. Several state-of-the-art semantic segmentation models suffer from the part misclassification problem, wherein parts of the same object are labelled incorrectly. Previous methods have utilized hierarchical, iterative methods to fuse semantic and instance information, but they lack learnability in context fusion, and are computationally complex and heuristic driven. This paper presents Segment-Fusion, a novel attention-based method for hierarchical…
Understanding the context of complex and cluttered scenes is a challenging problem for semantic segmentation. However, it is difficult to model the context without prior and additional supervision because the scene's factors, such as the scale, shape, and appearance of objects, vary considerably in these scenes. To solve this, we propose to learn the structures of objects and the hierarchy among objects because context is based on these intrinsic properties. In this study, we design novel hierarchical, contextual, and multiscale pyramidal representations to capture the properties from an input…
St. Petersburg Institute for Informatics and Automation of RAS（俄罗斯科学院圣彼得堡信息学与自动化研究所）
Piecewise constant image approximations of sequential number of segments or clusters of disconnected pixels are treated. The method of majorizing of optimal approximation sequence by hierarchical sequence of image approximations is proposed. A generalization for multidimensional case of color and multispectral images is foreseen.
Transformers have shown great success in medical image segmentation. However, transformers may exhibit a limited generalization ability due to the underlying single-scale self-attention (SA) mechanism. In this paper, we address this issue by introducing a Multi-scale hiERarchical vIsion Transformer (MERIT) backbone network, which improves the generalizability of the model by computing SA at multiple scales. We also incorporate an attention-based decoder, namely Cascaded Attention Decoding (CASCADE), for further refinement of multi-stage features generated by MERIT. Finally, we introduce an eff…
Unsupervised semantic segmentation aims to discover groupings within and across images that capture object and view-invariance of a category without external supervision. Grouping naturally has levels of granularity, creating ambiguity in unsupervised segmentation. Existing methods avoid this ambiguity and treat it as a factor outside modeling, whereas we embrace it and desire hierarchical grouping consistency for unsupervised segmentation. We approach unsupervised segmentation as a pixel-wise feature learning problem. Our idea is that a good representation shall reveal not just a particular l…
Beijing Institute of Technology（北京理工大学）；ETH Zurich（苏黎世联邦理工学院）；University of Technology Sydney（悉尼科技大学）；Zhejiang University（浙江大学）；Baidu Research（百度研究院）
Humans are able to recognize structured relations in observation, allowing us to decompose complex scenes into simpler parts and abstract the visual world in multiple levels. However, such hierarchical reasoning ability of human perception remains largely unexplored in current literature of semantic segmentation. Existing work is often aware of flatten labels and predicts target classes exclusively for each pixel. In this paper, we instead address hierarchical semantic segmentation (HSS), which aims at structured, pixel-wise description of visual observation in terms of a class hierarchy. We d…
Media and Data Science Research Labs, Adobe（Adobe 媒体与数据科学研究实验室）；Adobe Experience Cloud（Adobe 体验云）
Structure extraction from document images has been a long-standing research topic due to its high impact on a wide range of practical applications. In this paper, we share our findings on employing a hierarchical semantic segmentation network for this task of structure extraction. We propose a prior based deep hierarchical CNN network architecture that enables document structure extraction using very high resolution(1800 x 1000) images. We divide the document image into overlapping horizontal strips such that the network segments a strip and uses its prediction mask as prior for predicting the…
University of Notre Dame（圣母大学）；Nanjing University of Science and Technology（南京理工大学）；Leibniz-Institut für Analytische Wissenschaften–ISAS–e.V.（莱布尼茨分析科学研究所）
Deep learning (DL) based semantic segmentation methods have achieved excellent performance in biomedical image segmentation, producing high quality probability maps to allow extraction of rich instance information to facilitate good instance segmentation. While numerous efforts were put into developing new DL semantic segmentation models, less attention was paid to a key issue of how to effectively explore their probability maps to attain the best possible instance segmentation. We observe that probability maps by DL semantic segmentation models can be used to generate many possible instance c…
Dynamic Robot-Assisted Surgery with Hierarchical Class-Incremental Semantic Segmentation
Department of Computer Science, University of Freiburg（弗赖堡大学计算机科学系）；Zuse School ELIZA（Zuse学校ELIZA）；NeuroPoly Lab, Institute of Biomedical Engineering, Polytechnique Montréal（神经Poly实验室，生物医学工程学院，蒙特利尔理工学院）；Mila - Québec AI Institute（魁北克人工智能研究所）；Collaborative Research Institute Intelligent Oncology (CRIION)（智能肿瘤学协作研究机构）
Huazhong University of Science & Technology（华中科技大学）；Horizon Robotics（地平线机器人）
Instance segmentation on point clouds is a fundamental task in 3D scene perception. In this work, we propose a concise clustering-based framework named HAIS, which makes full use of spatial relation of points and point sets. Considering clustering-based methods may result in over-segmentation or under-segmentation, we introduce the hierarchical aggregation to progressively generate instance proposals, i.e., point aggregation for preliminarily clustering points to sets and set aggregation for generating complete instances from sets. Once the complete 3D instances are obtained, a sub-network of …
Instance segmentation is an active topic in computer vision that is usually solved by using supervised learning approaches over very large datasets composed of object level masks. Obtaining such a dataset for any new domain can be very expensive and time-consuming. In addition, models trained on certain annotated categories do not generalize well to unseen objects. The goal of this paper is to propose a method that can perform unsupervised discovery of long-tail categories in instance segmentation, through learning instance embeddings of masked regions. Leveraging rich relationship and hierarc…
Huaqiao University（华侨大学）；Guangdong Second Provincial General Hospital（广东省第二人民医院）
Semantic segmentation of electron microscopy (EM) is an essential step to efficiently obtain reliable morphological statistics. Despite the great success achieved using deep convolutional neural networks (CNNs), they still produce coarse segmentations with lots of discontinuities and false positives for mitochondria segmentation. In this study, we introduce a centerline-aware multitask network by utilizing centerline as an intrinsic shape cue of mitochondria to regularize the segmentation. Since the application of 3D CNNs on large medical volumes is usually hindered by their substantial comput…
International Max Planck Research School - Molecular Biomedicine（国际马克斯·普朗克分子生物医学研究学院）
The random walker method for image segmentation is a popular tool for semi-automatic image segmentation, especially in the biomedical field. However, its linear asymptotic run time and memory requirements make application to 3D datasets of increasing sizes impractical. We propose a hierarchical framework that, to the best of our knowledge, is the first attempt to overcome these restrictions for the random walker algorithm and achieves sublinear run time and constant memory complexity. The goal of this framework is -- rather than improving the segmentation quality compared to the baseline metho…
The Chinese University of Hong Kong（香港中文大学）；Tencent YouTu Lab（腾讯优图实验室）
We achieve 3D semantic scene labeling by exploring semantic relation between each point and its contextual neighbors through edges. Besides an encoder-decoder branch for predicting point labels, we construct an edge branch to hierarchically integrate point features and generate edge features. To incorporate point features in the edge branch, we establish a hierarchical graph framework, where the graph is initialized from a coarse layer and gradually enriched along the point decoding process. For each edge in the final graph, we predict a label to indicate the semantic consistency of the two co…
Renmin University of China（中国人民大学）；AInnovation Technology Co., Ltd.（创新奇智科技有限公司）；Northwestern Polytechnical University（西北工业大学）；Visionary Intelligence Ltd.（远景智能有限公司）；Beijing Tongren Hospital（北京同仁医院）；Peking Union Medical College Hospital（北京协和医院）
The medical image is characterized by the inter-class indistinction, high variability, and noise, where the recognition of pixels is challenging. Unlike previous self-attention based methods that capture context information from one level, we reformulate the self-attention mechanism from the view of the high-order graph and propose a novel method, namely Hierarchical Attention Network (HANet), to address the problem of medical image segmentation. Concretely, an HA module embedded in the HANet captures context information from neighbors of multiple levels, where these neighbors are extracted fr…
For many biological image segmentation tasks, including topological knowledge, such as the nesting of classes, can greatly improve results. However, most `out-of-the-box' CNN models are still blind to such prior information. In this paper, we propose a novel approach to encode this information, through a multi-level activation layer and three compatible losses. We benchmark all of them on nuclei segmentation in bright-field microscopy cell images from the 2018 Data Science Bowl challenge, offering an exemplary segmentation task with cells and nested subcellular structures. Our scheme greatly s…
As a basic task in computer vision, semantic segmentation can provide fundamental information for object detection and instance segmentation to help the artificial intelligence better understand real world. Since the proposal of fully convolutional neural network (FCNN), it has been widely used in semantic segmentation because of its high accuracy of pixel-wise classification as well as high precision of localization. In this paper, we apply several famous FCNN to brain tumor segmentation, making comparisons and adjusting network architectures to achieve better performance measured by metrics …
University of Toronto（多伦多大学）；Nvidia（英伟达）；Vector Institute（向量研究所）
Existing transformer-based image backbones typically propagate feature information in one direction from lower to higher-levels. This may not be ideal since the localization ability to delineate accurate object boundaries, is most prominent in the lower, high-resolution feature maps, while the semantics that can disambiguate image signals belonging to one object vs. another, typically emerges in a higher level of processing. We present Hierarchical Inter-Level Attention (HILA), an attention-based method that captures Bottom-Up and Top-Down Updates between features of different levels. HILA ext…
Nanjing University（南京大学）；National University of Defense Technology（国防科技大学）
Deep learning approaches to 3D shape segmentation are typically formulated as a multi-class labeling problem. Existing models are trained for a fixed set of labels, which greatly limits their flexibility and adaptivity. We opt for top-down recursive decomposition and develop the first deep learning model for hierarchical segmentation of 3D shapes, based on recursive neural networks. Starting from a full shape represented as a point cloud, our model performs recursive binary decomposition, where the decomposition network at all nodes in the hierarchy share weights. At each node, a node classifi…
Image recognition tasks that involve identifying parts of an object or the contents of a vessel can be viewed as a hierarchical problem, which can be solved by initial recognition of the main object, followed by recognition of its parts or contents. To achieve such modular recognition, it is necessary to use the output of one recognition method (which identifies the general object) as the input for a second method (which identifies the parts or contents). In recent years, convolutional neural networks have emerged as the dominant method for segmentation and classification of images. This work …
Multi-scale inference is commonly used to improve the results of semantic segmentation. Multiple images scales are passed through a network and then the results are combined with averaging or max pooling. In this work, we present an attention-based approach to combining multi-scale predictions. We show that predictions at certain scales are better at resolving particular failures modes, and that the network learns to favor those scales for such cases in order to generate better predictions. Our attention mechanism is hierarchical, which enables it to be roughly 4x more memory efficient to trai…
MIS-HCC: Hierarchical Channel Clustering for Efficient Medical Image Segmentation
Yale University（耶鲁大学）；University of Florida（佛罗里达大学）；Wichita State University（威奇托州立大学）；Purdue University（普渡大学）；University of California, Berkeley（加利福尼亚大学伯克利分校）；Institute of Computing Technology, Chinese Academy of Sciences（中国科学院计算技术研究所）；Stevens Institute of Technology（史蒂文斯理工学院）；Zhejiang University（浙江大学）
A large labeled dataset is a key to the success of supervised deep learning, but for medical image segmentation, it is highly challenging to obtain sufficient annotated images for model training. In many scenarios, unannotated images are abundant and easy to acquire. Self-supervised learning (SSL) has shown great potentials in exploiting raw data information and representation learning. In this paper, we propose Hierarchical Self-Supervised Learning (HSSL), a new self-supervised framework that boosts medical image segmentation by making good use of unannotated data. Unlike the current literatu…
