Uncertainty-Aware Semi-Supervised Method Using Large Unlabeled and Limited Labeled COVID-19 Data

COVID-19-CT-CXR: a freely accessible and weakly labeled chest X-ray and CT image collection on COVID-19 from biomedical literature

The latest threat to global health is the COVID-19 outbreak. Although there exist large datasets of chest X-rays (CXR) and computed tomography (CT) scans, few COVID-19 image collections are currently available due to patient privacy. At the same time, there is a rapid growth of COVID-19-relevant articles in the biomedical literature. Here, we present COVID-19-CT-CXR, a public database of COVID-19 CXR and CT images, which are automatically extracted from COVID-19-relevant articles from the PubMed Central Open Access (PMC-OA) Subset. We extracted figures, associated captions, and relevant figure…

Mutual- and Self- Prototype Alignment for Semi-supervised Medical Image Segmentation

Semi-supervised learning methods have been explored in medical image segmentation tasks due to the scarcity of pixel-level annotation in the real scenario. Proto-type alignment based consistency constraint is an intuitional and plausible solu-tion to explore the useful information in the unlabeled data. In this paper, we propose a mutual- and self- prototype alignment (MSPA) framework to better utilize the unlabeled data. In specific, mutual-prototype alignment enhances the information interaction between labeled and unlabeled data. The mutual-prototype alignment imposes two consistency constr…

Incorporating Semi-Supervised and Positive-Unlabeled Learning for Boosting Full Reference Image Quality Assessment

Full-reference (FR) image quality assessment (IQA) evaluates the visual quality of a distorted image by measuring its perceptual difference with pristine-quality reference, and has been widely used in low-level vision tasks. Pairwise labeled data with mean opinion score (MOS) are required in training FR-IQA model, but is time-consuming and cumbersome to collect. In contrast, unlabeled data can be easily collected from an image degradation or restoration process, making it encouraging to exploit unlabeled training data to boost FR-IQA performance. Moreover, due to the distribution inconsistency…

Modeling the Probabilistic Distribution of Unlabeled Data forOne-shot Medical Image Segmentation

Existing image segmentation networks mainly leverage large-scale labeled datasets to attain high accuracy. However, labeling medical images is very expensive since it requires sophisticated expert knowledge. Thus, it is more desirable to employ only a few labeled data in pursuing high segmentation performance. In this paper, we develop a data augmentation method for one-shot brain magnetic resonance imaging (MRI) image segmentation which exploits only one labeled MRI image (named atlas) and a few unlabeled images. In particular, we propose to learn the probability distributions of deformations…

用于子宫层分割的无监督对抗域自适应：从带标签的电影MRI到无标签的动态EPI MRI

Unsupervised Adversarial Domain Adaptation for Uterine layer Segmentation: From Labeled Cine to Unlabeled Dynamic EPI MRI

该研究针对子宫层分割问题，提出无监督对抗域自适应框架，迁移电影MRI的分割知识至动态EPI MRI，结合Unet-LSTM与多尺度域判别器，实现了良好的分割效果，为探究子宫收缩性与T2*变化的关联提供了可行方法。

Dual-Consistency Semi-Supervised Learning with Uncertainty Quantification for COVID-19 Lesion Segmentation from CT Images

The novel coronavirus disease 2019 (COVID-19) characterized by atypical pneumonia has caused millions of deaths worldwide. Automatically segmenting lesions from chest Computed Tomography (CT) is a promising way to assist doctors in COVID-19 screening, treatment planning, and follow-up monitoring. However, voxel-wise annotations are extremely expert-demanding and scarce, especially when it comes to novel diseases, while an abundance of unlabeled data could be available. To tackle the challenge of limited annotations, in this paper, we propose an uncertainty-guided dual-consistency learning netw…

Few-shot Learning for CT Scan based COVID-19 Diagnosis

Coronavirus disease 2019 (COVID-19) is a Public Health Emergency of International Concern infecting more than 40 million people across 188 countries and territories. Chest computed tomography (CT) imaging technique benefits from its high diagnostic accuracy and robustness, it has become an indispensable way for COVID-19 mass testing. Recently, deep learning approaches have become an effective tool for automatic screening of medical images, and it is also being considered for COVID-19 diagnosis. However, the high infection risk involved with COVID-19 leads to relative sparseness of collected la…

GASNet: Weakly-supervised Framework for COVID-19 Lesion Segmentation

Segmentation of infected areas in chest CT volumes is of great significance for further diagnosis and treatment of COVID-19 patients. Due to the complex shapes and varied appearances of lesions, a large number of voxel-level labeled samples are generally required to train a lesion segmentation network, which is a main bottleneck for developing deep learning based medical image segmentation algorithms. In this paper, we propose a weakly-supervised lesion segmentation framework by embedding the Generative Adversarial training process into the Segmentation Network, which is called GASNet. GASNet …

Deep Semi-supervised Metric Learning with Dual Alignment for Cervical Cancer Cell Detection

Deep learning has achieved unprecedented success in various object detection tasks with huge amounts of labeled data. However, obtaining large-scale annotations for medical images is extremely challenging due to the high demand of labour and expertise. In this paper, we propose a novel deep semi-supervised metric learning method to effectively leverage both labeled and unlabeled data for cervical cancer cell detection. Specifically, our model learns a metric space and conducts dual alignment of semantic features on both the proposal level and the prototype levels. On the proposal level, we ali…