In the real world, data streams are ubiquitous -- think of network traffic or sensor data. Mining patterns, e.g., outliers or clusters, from such data must take place in real time. This is challenging because (1) streams often have high dimensionality, and (2) the data characteristics may change over time. Existing approaches tend to focus on only one aspect, either high dimensionality or the specifics of the streaming setting. For static data, a common approach to deal with high dimensionality -- known as subspace search -- extracts low-dimensional, `interesting' projections (subspaces), in which patterns are easier to find. In this paper, we address both Challenge (1) and (2) by generalising subspace search to data streams. Our approach, Streaming Greedy Maximum Random Deviation (SGMRD), monitors interesting subspaces in high-dimensional data streams. It leverages novel multivariate dependency estimators and monitoring techniques based on bandit theory. We show that the benefits of SGMRD are twofold: (i) It monitors subspaces efficiently, and (ii) this improves the results of downstream data mining tasks, such as outlier detection. Our experiments, performed against synthetic and real-world data, demonstrate that SGMRD outperforms its competitors by a large margin.
In this paper, we address the problem of learning compact similarity-preserving embeddings for massive high-dimensional streams of data in order to perform efficient similarity search. We present a new online method for computing binary compressed representations -sketches- of high-dimensional real feature vectors. Given an expected code length $c$ and high-dimensional input data points, our algorithm provides a $c$-bits binary code for preserving the distance between the points from the original high-dimensional space. Our algorithm does not require neither the storage of the whole dataset no…
High-dimensional streaming data are becoming increasingly ubiquitous in many fields. They often lie in multiple low-dimensional subspaces, and the manifold structures may change abruptly on the time scale due to pattern shift or occurrence of anomalies. However, the problem of detecting the structural changes in a real-time manner has not been well studied. To fill this gap, we propose a dynamic sparse subspace learning approach for online structural change-point detection of high-dimensional streaming data. A novel multiple structural change-point model is proposed and the asymptotic properti…
Flatiron Institute（弗莱提伦研究所）；NYU Langone Medical Center（纽约大学朗格尼医学中心）
Big data problems frequently require processing datasets in a streaming fashion, either because all data are available at once but collectively are larger than available memory or because the data intrinsically arrive one data point at a time and must be processed online. Here, we introduce a computationally efficient version of similarity matching, a framework for online dimensionality reduction that incrementally estimates the top K-dimensional principal subspace of streamed data while keeping in memory only the last sample and the current iterate. To assess the performance of our approach, …
University of Michigan（密歇根大学）；Carnegie Mellon University（卡内基梅隆大学）；Harvard University（哈佛大学）
For many modern applications in science and engineering, data are collected in a streaming fashion carrying time-varying information, and practitioners need to process them with a limited amount of memory and computational resources in a timely manner for decision making. This often is coupled with the missing data problem, such that only a small fraction of data attributes are observed. These complications impose significant, and unconventional, constraints on the problem of streaming Principal Component Analysis (PCA) and subspace tracking, which is an essential building block for many infer…
Extracting latent low-dimensional structure from high-dimensional data is of paramount importance in timely inference tasks encountered with `Big Data' analytics. However, increasingly noisy, heterogeneous, and incomplete datasets as well as the need for {\em real-time} processing of streaming data pose major challenges to this end. In this context, the present paper permeates benefits from rank minimization to scalable imputation of missing data, via tracking low-dimensional subspaces and unraveling latent (possibly multi-way) structure from \emph{incomplete streaming} data. For low-rank matr…
This letter presents a new spectral-clustering-based approach to the subspace clustering problem. Underpinning the proposed method is a convex program for optimal direction search, which for each data point d finds an optimal direction in the span of the data that has minimum projection on the other data points and non-vanishing projection on d. The obtained directions are subsequently leveraged to identify a neighborhood set for each data point. An alternating direction method of multipliers framework is provided to efficiently solve for the optimal directions. The proposed method is shown to…
Duke University（杜克大学）；University of Wisconsin-Madison（威斯康星大学麦迪逊分校）
In an era of ubiquitous large-scale streaming data, the availability of data far exceeds the capacity of expert human analysts. In many settings, such data is either discarded or stored unprocessed in datacenters. This paper proposes a method of online data thinning, in which large-scale streaming datasets are winnowed to preserve unique, anomalous, or salient elements for timely expert analysis. At the heart of this proposed approach is an online anomaly detection method based on dynamic, low-rank Gaussian mixture models. Specifically, the high-dimensional covariances matrices associated with…
This paper studies the subspace clustering problem in which data points collected from high-dimensional ambient space lie in a union of linear subspaces. Subspace clustering becomes challenging when the dimension of intersection between subspaces is large and most of the self-representation based methods are sensitive to the intersection between the span of clusters. In sharp contrast to the self-representation based methods, a recently proposed clustering method termed Innovation Pursuit, computed a set of optimal directions (directions of innovation) to build the adjacency matrix. This paper…
Applied Artificial Intelligence Institute (A2I2)（应用人工智能研究所（A2I2））；Deakin University（迪肯大学）
We propose an algorithm for Bayesian functional optimisation - that is, finding the function to optimise a process - guided by experimenter beliefs and intuitions regarding the expected characteristics (length-scale, smoothness, cyclicity etc.) of the optimal solution encoded into the covariance function of a Gaussian Process. Our algorithm generates a sequence of finite-dimensional random subspaces of functional space spanned by a set of draws from the experimenter's Gaussian Process. Standard Bayesian optimisation is applied on each subspace, and the best solution found used as a starting po…
University of Southern California（南加州大学）；Army Research Laboratory（陆军研究实验室）；Mira Costa Highschool（米拉科斯塔高中）
Built upon the decision tree (DT) classification and regression idea, the subspace learning machine (SLM) has been recently proposed to offer higher performance in general classification and regression tasks. Its performance improvement is reached at the expense of higher computational complexity. In this work, we investigate two ways to accelerate SLM. First, we adopt the particle swarm optimization (PSO) algorithm to speed up the search of a discriminant dimension that is expressed as a linear combination of current dimensions. The search of optimal weights in the linear combination is compu…
This paper introduces a simple and efficient density estimator that enables fast systematic search. To show its advantage over commonly used kernel density estimator, we apply it to outlying aspects mining. Outlying aspects mining discovers feature subsets (or subspaces) that describe how a query stand out from a given dataset. The task demands a systematic search of subspaces. We identify that existing outlying aspects miners are restricted to datasets with small data size and dimensions because they employ kernel density estimator, which is computationally expensive, for subspace assessments…
The University of Tokyo（东京大学）；National Taiwan University（台湾大学）
Generative image modeling techniques such as GAN demonstrate highly convincing image generation result. However, user interaction is often necessary to obtain the desired results. Existing attempts add interactivity but require either tailored architectures or extra data. We present a human-in-the-optimization method that allows users to directly explore and search the latent vector space of generative image modeling. Our system provides multiple candidates by sampling the latent vector space, and the user selects the best blending weights within the subspace using multiple sliders. In additio…
The University of Melbourne（墨尔本大学）；Deakin University（迪肯大学）；Data61, CSIRO（联邦科学与工业研究组织Data61）
Subspace clustering aims to find groups of similar objects (clusters) that exist in lower dimensional subspaces from a high dimensional dataset. It has a wide range of applications, such as analysing high dimensional sensor data or DNA sequences. However, existing algorithms have limitations in finding clusters in non-disjoint subspaces and scaling to large data, which impinge their applicability in areas such as bioinformatics and the Internet of Things. We aim to address such limitations by proposing a subspace clustering algorithm using a bottom-up strategy. Our algorithm first searches for…
The Chinese University of Hong Kong (Shenzhen)（香港中文大学（深圳））；Shenzhen Research Institute of Big Data（深圳大数据研究院）
Subspace clustering (SC) aims to cluster data lying in a union of low-dimensional subspaces. Usually, SC learns an affinity matrix and then performs spectral clustering. Both steps suffer from high time and space complexity, which leads to difficulty in clustering large datasets. This paper presents a method called k-Factorization Subspace Clustering (k-FSC) for large-scale subspace clustering. K-FSC directly factorizes the data into k groups via pursuing structured sparsity in the matrix factorization model. Thus, k-FSC avoids learning affinity matrix and performing eigenvalue decomposition, …
Linear Fitness Subspace in Protein Language Models Enables Sample-Efficient Directed Evolution
Nanyang Technological University（南洋理工大学）；Sun Yat-sen University（中山大学）；Zhejiang University（浙江大学）；Carnegie Mellon University（卡内基梅隆大学）；Shanghai Institute of Optics and Fine Mechanics（上海光学精密机械研究所）；Zhongnan Hospital, Wuhan University（武汉大学中南医院）；University of Southern California（南加州大学）
We present the first sublinear memory sketch that can be queried to find the nearest neighbors in a dataset. Our online sketching algorithm compresses an N element dataset to a sketch of size $O(N^b \log^3 N)$ in $O(N^{(b+1)} \log^3 N)$ time, where $b < 1$. This sketch can correctly report the nearest neighbors of any query that satisfies a stability condition parameterized by $b$. We achieve sublinear memory performance on stable queries by combining recent advances in locality sensitive hash (LSH)-based estimators, online kernel density estimation, and compressed sensing. Our theoretical res…
University of California, Berkeley（加州大学伯克利分校）；The Johns Hopkins University（约翰斯·霍普金斯大学）；Apple Inc（苹果公司）；Lehigh University（理海大学）
Finding a small set of representatives from an unlabeled dataset is a core problem in a broad range of applications such as dataset summarization and information extraction. Classical exemplar selection methods such as $k$-medoids work under the assumption that the data points are close to a few cluster centroids, and cannot handle the case where data lie close to a union of subspaces. This paper proposes a new exemplar selection model that searches for a subset that best reconstructs all data points as measured by the $\ell_1$ norm of the representation coefficients. Geometrically, this subse…
Harvard University（哈佛大学）；Technion, Israel Institute of Technology（以色列理工学院）
We present a high-dimensional analysis of three popular algorithms, namely, Oja's method, GROUSE and PETRELS, for subspace estimation from streaming and highly incomplete observations. We show that, with proper time scaling, the time-varying principal angles between the true subspace and its estimates given by the algorithms converge weakly to deterministic processes when the ambient dimension $n$ tends to infinity. Moreover, the limiting processes can be exactly characterized as the unique solutions of certain ordinary differential equations (ODEs). A finite sample bound is also given, showin…
