Joint Entity and Relation Extraction with Set Prediction Networks
National Laboratory of Pattern Recognition, Institute of Automation, Chinese Academy of Sciences（中国科学院自动化研究所模式识别国家重点实验室）；University of Chinese Academy of Sciences（中国科学院大学）；Beijing Unisound Information Technology Co., Ltd（北京云知声信息技术有限公司）
Dianbo Sui, Yubo Chen, Kang Liu, Jun Zhao, Xiangrong Zeng, Shengping Liu
The joint entity and relation extraction task aims to extract all relational triples from a sentence. In essence, the relational triples contained in a sentence are unordered. However, previous seq2seq based models require to convert the set of triples into a sequence in the training phase. To break this bottleneck, we treat joint entity and relation extraction as a direct set prediction problem, so that the extraction model can get rid of the burden of predicting the order of multiple triples. To solve this set prediction problem, we propose networks featured by transformers with non-autoregressive parallel decoding. Unlike autoregressive approaches that generate triples one by one in a certain order, the proposed networks directly output the final set of triples in one shot. Furthermore, we also design a set-based loss that forces unique predictions via bipartite matching. Compared with cross-entropy loss that highly penalizes small shifts in triple order, the proposed bipartite matching loss is invariant to any permutation of predictions; thus, it can provide the proposed networks with a more accurate training signal by ignoring triple order and focusing on relation types and entities. Experiments on two benchmark datasets show that our proposed model significantly outperforms current state-of-the-art methods. Training code and trained models will be available at http://github.com/DianboWork/SPN4RE.
RheinMain University of Applied Sciences（莱茵曼应用科学大学）
We present a joint model for entity-level relation extraction from documents. In contrast to other approaches - which focus on local intra-sentence mention pairs and thus require annotations on mention level - our model operates on entity level. To do so, a multi-task approach is followed that builds upon coreference resolution and gathers relevant signals via multi-instance learning with multi-level representations combining global entity and local mention information. We achieve state-of-the-art relation extraction results on the DocRED dataset and report the first entity-level end-to-end re…
Compared with traditional sentence-level relation extraction, document-level relation extraction is a more challenging task where an entity in a document may be mentioned multiple times and associated with multiple relations. However, most methods of document-level relation extraction do not distinguish between mention-level features and entity-level features, and just apply simple pooling operation for aggregating mention-level features into entity-level features. As a result, the distinct semantics between the different mentions of an entity are overlooked. To address this problem, we propos…
In this paper, we address two different types of noise in information extraction models: noise from distant supervision and noise from pipeline input features. Our target tasks are entity typing and relation extraction. For the first noise type, we introduce multi-instance multi-label learning algorithms using neural network models, and apply them to fine-grained entity typing for the first time. This gives our models comparable performance with the state-of-the-art supervised approach which uses global embeddings of entities. For the second noise type, we propose ways to improve the integrati…
School of Computer Science and Technology, Soochow University（苏州大学计算机科学与技术学院）；Collaborative Innovation Center of Novel Software Technology and Industrialization（新型软件技术与产业化协同创新中心）；Alibaba Group（阿里巴巴集团）；School of Computer Science and Technology, Heilongjiang University（黑龙江大学计算机科学与技术学院）
Distant supervised relation extraction is an efficient approach to scale relation extraction to very large corpora, and has been widely used to find novel relational facts from plain text. Recent studies on neural relation extraction have shown great progress on this task via modeling the sentences in low-dimensional spaces, but seldom considered syntax information to model the entities. In this paper, we propose to learn syntax-aware entity embedding for neural relation extraction. First, we encode the context of entities on a dependency tree as sentence-level entity embedding based on tree-G…
JD AI Research（京东人工智能研究院）；Stanford University（斯坦福大学）
Document-level relation extraction is a challenging task which requires reasoning over multiple sentences in order to predict relations in a document. In this paper, we pro-pose a joint training frameworkE2GRE(Entity and Evidence Guided Relation Extraction)for this task. First, we introduce entity-guided sequences as inputs to a pre-trained language model (e.g. BERT, RoBERTa). These entity-guided sequences help a pre-trained language model (LM) to focus on areas of the document related to the entity. Secondly, we guide the fine-tuning of the pre-trained language model by using its internal att…
Information Sciences Institute, University of Southern California（南加州大学信息科学研究所）；University of Illinois Urbana-Champaign（伊利诺伊大学厄巴纳-香槟分校）；University of California, Los Angeles（加利福尼亚大学洛杉矶分校）
Document-level entity-based extraction (EE), aiming at extracting entity-centric information such as entity roles and entity relations, is key to automatic knowledge acquisition from text corpora for various domains. Most document-level EE systems build extractive models, which struggle to model long-term dependencies among entities at the document level. To address this issue, we propose a generative framework for two document-level EE tasks: role-filler entity extraction (REE) and relation extraction (RE). We first formulate them as a template generation problem, allowing models to efficient…
Joint entity and relation extraction framework constructs a unified model to perform entity recognition and relation extraction simultaneously, which can exploit the dependency between the two tasks to mitigate the error propagation problem suffered by the pipeline model. Current efforts on joint entity and relation extraction focus on enhancing the interaction between entity recognition and relation extraction through parameter sharing, joint decoding, or other ad-hoc tricks (e.g., modeled as a semi-Markov decision process, cast as a multi-round reading comprehension task). However, there are…
In this paper, we report our method for the Information Extraction task in 2019 Language and Intelligence Challenge. We incorporate BERT into the multi-head selection framework for joint entity-relation extraction. This model extends existing approaches from three perspectives. First, BERT is adopted as a feature extraction layer at the bottom of the multi-head selection framework. We further optimize BERT by introducing a semantic-enhanced task during BERT pre-training. Second, we introduce a large-scale Baidu Baike corpus for entity recognition pre-training, which is of weekly supervised lea…
Pre-trained Language Models and Few-shot Learning for Medical Entity Extraction
Santa Clara University（圣克拉拉大学）；San Francisco State University（旧金山州立大学）；Cornell University（康奈尔大学）；The Chinese University of Hong Kong（香港中文大学）；Stevens Institute of Technology（史蒂文斯理工学院）
Siemens AG（西门子股份公司）；University of Munich (LMU)（慕尼黑大学（LMU））
Named Entity Recognition (NER) and Relation Extraction (RE) are essential tools in distilling knowledge from biomedical literature. This paper presents our findings from participating in BioNLP Shared Tasks 2019. We addressed Named Entity Recognition including nested entities extraction, Entity Normalization and Relation Extraction. Our proposed approach of Named Entities can be generalized to different languages and we have shown it's effectiveness for English and Spanish text. We investigated linguistic features, hybrid loss including ranking and Conditional Random Fields (CRF), multi-task o…
National University of Singapore（新加坡国立大学）；Indian Institute of Technology Kharagpur（印度理工学院卡拉格普尔分校）
Distantly supervised datasets for relation extraction mostly focus on sentence-level extraction, and they cover very few relations. In this work, we propose cross-document relation extraction, where the two entities of a relation tuple appear in two different documents that are connected via a chain of common entities. Following this idea, we create a dataset for two-hop relation extraction, where each chain contains exactly two documents. Our proposed dataset covers a higher number of relations than the publicly available sentence-level datasets. We also propose a hierarchical entity graph co…
National Key Laboratory for Multimedia Information Processing, Peking University（北京大学多媒体信息处理全国重点实验室）
Joint entity and relation extraction (JERE) is one of the most important tasks in information extraction. However, most existing works focus on sentence-level coarse-grained JERE, which have limitations in real-world scenarios. In this paper, we construct a large-scale document-level fine-grained JERE dataset DocRED-FE, which improves DocRED with Fine-Grained Entity Type. Specifically, we redesign a hierarchical entity type schema including 11 coarse-grained types and 119 fine-grained types, and then re-annotate DocRED manually according to this schema. Through comprehensive experiments we fin…
German Research Center for Artificial Intelligence (DFKI)（德国人工智能研究中心）
We present MobIE, a German-language dataset, which is human-annotated with 20 coarse- and fine-grained entity types and entity linking information for geographically linkable entities. The dataset consists of 3,232 social media texts and traffic reports with 91K tokens, and contains 20.5K annotated entities, 13.1K of which are linked to a knowledge base. A subset of the dataset is human-annotated with seven mobility-related, n-ary relation types, while the remaining documents are annotated using a weakly-supervised labeling approach implemented with the Snorkel framework. To the best of our kn…
Automated entity relation extraction (RE) from literature provides an important source for constructing biomedical database, which is more efficient and extensible than manual curation. However, existing RE models usually ignore the information contained in sentence structures and target entities. In this paper, we propose BERE, a deep learning based model which uses Gumbel Tree-GRU to learn sentence structures and joint embedding to incorporate entity information. It also employs word-level attention for improved relation extraction and sentence-level attention to suit the distantly supervise…
We consider a joint information extraction (IE) model, solving named entity recognition, coreference resolution and relation extraction jointly over the whole document. In particular, we study how to inject information from a knowledge base (KB) in such IE model, based on unsupervised entity linking. The used KB entity representations are learned from either (i) hyperlinked text documents (Wikipedia), or (ii) a knowledge graph (Wikidata), and appear complementary in raising IE performance. Representations of corresponding entity linking (EL) candidates are added to text span representations of…
East China University of Science and Technology（华东理工大学）；Shanghai Hospital Development Center（上海医院发展中心）
Entity and relation extraction is the necessary step in structuring medical text. However, the feature extraction ability of the bidirectional long short term memory network in the existing model does not achieve the best effect. At the same time, the language model has achieved excellent results in more and more natural language processing tasks. In this paper, we present a focused attention model for the joint entity and relation extraction task. Our model integrates well-known BERT language model into joint learning through dynamic range attention mechanism, thus improving the feature repre…
We revisit the classic problem of document-level role-filler entity extraction (REE) for template filling. We argue that sentence-level approaches are ill-suited to the task and introduce a generative transformer-based encoder-decoder framework (GRIT) that is designed to model context at the document level: it can make extraction decisions across sentence boundaries; is implicitly aware of noun phrase coreference structure, and has the capacity to respect cross-role dependencies in the template structure. We evaluate our approach on the MUC-4 dataset, and show that our model performs substanti…
Entity-relation extraction aims to jointly solve named entity recognition (NER) and relation extraction (RE). Recent approaches use either one-way sequential information propagation in a pipeline manner or two-way implicit interaction with a shared encoder. However, they still suffer from poor information interaction due to the gap between the different task forms of NER and RE, raising a controversial question whether RE is really beneficial to NER. Motivated by this, we propose a novel and unified cascade framework that combines the advantages of both sequential information propagation and i…
TCS Research & Innovation（塔塔咨询服务公司研究与创新中心）；Indian Institute of Technology Bombay（印度理工学院孟买分校）
Relation Extraction is an important task in Information Extraction which deals with identifying semantic relations between entity mentions. Traditionally, relation extraction is carried out after entity extraction in a "pipeline" fashion, so that relation extraction only focuses on determining whether any semantic relation exists between a pair of extracted entity mentions. This leads to propagation of errors from entity extraction stage to relation extraction stage. Also, entity extraction is carried out without any knowledge about the relations. Hence, it was observed that jointly performing…
Thomson Reuters Special Services, LLC（汤森路透特别服务有限责任公司）
We introduce a hybrid human-automated system that provides scalable entity-risk relation extractions across large data sets. Given an expert-defined keyword taxonomy, entities, and data sources, the system returns text extractions based on bidirectional token distances between entities and keywords and expands taxonomy coverage with word vector encodings. Our system represents a more simplified architecture compared to alerting focused systems - motivated by high coverage use cases in the risk mining space such as due diligence activities and intelligence gathering. We provide an overview of t…
University of Washington（华盛顿大学）；Google AI Language（谷歌AI语言团队）；Allen Institute for Artificial Intelligence（艾伦人工智能研究所）
We examine the capabilities of a unified, multi-task framework for three information extraction tasks: named entity recognition, relation extraction, and event extraction. Our framework (called DyGIE++) accomplishes all tasks by enumerating, refining, and scoring text spans designed to capture local (within-sentence) and global (cross-sentence) context. Our framework achieves state-of-the-art results across all tasks, on four datasets from a variety of domains. We perform experiments comparing different techniques to construct span representations. Contextualized embeddings like BERT perform w…
National University of Defense Technology（国防科技大学）；The Affiliated Eye Hospital of Nanjing Medical University（南京医科大学附属眼科医院）
An exhaustive study has been conducted to investigate span-based models for the joint entity and relation extraction task. However, these models sample a large number of negative entities and negative relations during the model training, which are essential but result in grossly imbalanced data distributions and in turn cause suboptimal model performance. In order to address the above issues, we propose a two-phase paradigm for the span-based joint entity and relation extraction, which involves classifying the entities and relations in the first phase, and predicting the types of these entitie…
End-to-end relation extraction aims to identify named entities and extract relations between them. Most recent work models these two subtasks jointly, either by casting them in one structured prediction framework, or performing multi-task learning through shared representations. In this work, we present a simple pipelined approach for entity and relation extraction, and establish the new state-of-the-art on standard benchmarks (ACE04, ACE05 and SciERC), obtaining a 1.7%-2.8% absolute improvement in relation F1 over previous joint models with the same pre-trained encoders. Our approach essentia…
HIORE: Leveraging High-order Interactions for Unified Entity Relation Extraction
Tencent Inc.（腾讯公司）；ByteDance AI Lab（字节跳动人工智能实验室）；East China Normal University（华东师范大学）；University of California Santa Barbara（加州大学圣巴巴拉分校）；Shanghai Jiao Tong University（上海交通大学）
Ghent University（根特大学）；imec（比利时微电子研究中心）；IDLab（ID实验室）；Department of Information Technology（信息技术系）
Adversarial training (AT) is a regularization method that can be used to improve the robustness of neural network methods by adding small perturbations in the training data. We show how to use AT for the tasks of entity recognition and relation extraction. In particular, we demonstrate that applying AT to a general purpose baseline model for jointly extracting entities and relations, allows improving the state-of-the-art effectiveness on several datasets in different contexts (i.e., news, biomedical, and real estate data) and for different languages (English and Dutch).
This paper presents DWIE, the 'Deutsche Welle corpus for Information Extraction', a newly created multi-task dataset that combines four main Information Extraction (IE) annotation subtasks: (i) Named Entity Recognition (NER), (ii) Coreference Resolution, (iii) Relation Extraction (RE), and (iv) Entity Linking. DWIE is conceived as an entity-centric dataset that describes interactions and properties of conceptual entities on the level of the complete document. This contrasts with currently dominant mention-driven approaches that start from the detection and classification of named entity mentio…
Document-level relation extraction (RE), which requires reasoning on multiple entities in different sentences to identify complex inter-sentence relations, is more challenging than sentence-level RE. To extract the complex inter-sentence relations, previous studies usually employ graph neural networks (GNN) to perform inference upon heterogeneous document-graphs. Despite their great successes, these graph-based methods, which normally only consider the words within the mentions in the process of building graphs and reasoning, tend to ignore the non-entity clue words that are not in the mention…
Indian Institute of Science（印度科学研究所）；University of British Columbia（英属哥伦比亚大学）
Relation extraction is the problem of classifying the relationship between two entities in a given sentence. Distant Supervision (DS) is a popular technique for developing relation extractors starting with limited supervision. We note that most of the sentences in the distant supervision relation extraction setting are very long and may benefit from word attention for better sentence representation. Our contributions in this paper are threefold. Firstly, we propose two novel word attention models for distantly- supervised relation extraction: (1) a Bi-directional Gated Recurrent Unit (Bi-GRU) …
Structure-Aware Decoding Mechanisms for Complex Entity Extraction with Large-Scale Language Models
University of Southern California（南加州大学）；Washington University in St. Louis（圣路易斯华盛顿大学）；Stevens Institute of Technology（史蒂文斯理工学院）；University of Pennsylvania（宾夕法尼亚大学）
State-of-the-art models for joint entity recognition and relation extraction strongly rely on external natural language processing (NLP) tools such as POS (part-of-speech) taggers and dependency parsers. Thus, the performance of such joint models depends on the quality of the features obtained from these NLP tools. However, these features are not always accurate for various languages and contexts. In this paper, we propose a joint neural model which performs entity recognition and relation extraction simultaneously, without the need of any manually extracted features or the use of any external…
University of Illinois at Urbana-Champaign（伊利诺伊大学厄巴纳-香槟分校）；Adobe Research（Adobe研究院）
Compared to the general news domain, information extraction (IE) from biomedical text requires much broader domain knowledge. However, many previous IE methods do not utilize any external knowledge during inference. Due to the exponential growth of biomedical publications, models that do not go beyond their fixed set of parameters will likely fall behind. Inspired by how humans look up relevant information to comprehend a scientific text, we present a novel framework that utilizes external knowledge for joint entity and relation extraction named KECI (Knowledge-Enhanced Collective Inference). …
Distant supervision (DS) has been widely used to automatically construct (noisy) labeled data for relation extraction (RE). Given two entities, distant supervision exploits sentences that directly mention them for predicting their semantic relation. We refer to this strategy as 1-hop DS, which unfortunately may not work well for long-tail entities with few supporting sentences. In this paper, we introduce a new strategy named 2-hop DS to enhance distantly supervised RE, based on the observation that there exist a large number of relational tables on the Web which contain entity pairs that shar…
Named Entity Recognition and Relation Extraction for Chinese literature text is regarded as the highly difficult problem, partially because of the lack of tagging sets. In this paper, we build a discourse-level dataset from hundreds of Chinese literature articles for improving this task. To build a high quality dataset, we propose two tagging methods to solve the problem of data inconsistency, including a heuristic tagging method and a machine auxiliary tagging method. Based on this corpus, we also introduce several widely used models to conduct experiments. Experimental results not only show …
Document-level relation extraction (RE) aims to identify the relations between entities throughout an entire document. It needs complex reasoning skills to synthesize various knowledge such as coreferences and commonsense. Large-scale knowledge graphs (KGs) contain a wealth of real-world facts, and can provide valuable knowledge to document-level RE. In this paper, we propose an entity knowledge injection framework to enhance current document-level RE models. Specifically, we introduce coreference distillation to inject coreference knowledge, endowing an RE model with the more general capabili…
Recent information extraction approaches have relied on training deep neural models. However, such models can easily overfit noisy labels and suffer from performance degradation. While it is very costly to filter noisy labels in large learning resources, recent studies show that such labels take more training steps to be memorized and are more frequently forgotten than clean labels, therefore are identifiable in training. Motivated by such properties, we propose a simple co-regularization framework for entity-centric information extraction, which consists of several neural models with identica…
Jilin University（吉林大学）；Huawei Technologies Co., Ltd（华为技术有限公司）；University of Edinburgh（爱丁堡大学）；Peking University（北京大学）
Recent works on relational triple extraction have shown the superiority of jointly extracting entities and relations over the pipelined extraction manner. However, most existing joint models fail to balance the modeling of entity features and the joint decoding strategy, and thus the interactions between the entity level and triple level are not fully investigated. In this work, we first introduce the hierarchical dependency and horizontal commonality between the two levels, and then propose an entity-enhanced dual tagging framework that enables the triple extraction (TE) task to utilize such …
Indian Institute of Technology Kanpur (IIT Kanpur)（印度理工学院坎普尔分校）
This paper presents the system for SemEval 2021 Task 8 (MeasEval). MeasEval is a novel span extraction, classification, and relation extraction task focused on finding quantities, attributes of these quantities, and additional information, including the related measured entities, properties, and measurement contexts. Our submitted system, which placed fifth (team rank) on the leaderboard, consisted of SciBERT with [CLS] token embedding and CRF layer on top. We were also placed first in Quantity (tied) and Unit subtasks, second in MeasuredEntity, Modifier and Qualifies subtasks, and third in Qu…
Wright State University（莱特州立大学）；Maana Inc（Maana公司）；GoDaddy Inc（GoDaddy公司）
This work addresses challenges arising from extracting entities from textual data, including the high cost of data annotation, model accuracy, selecting appropriate evaluation criteria, and the overall quality of annotation. We present a framework that integrates Entity Set Expansion (ESE) and Active Learning (AL) to reduce the annotation cost of sparse data and provide an online evaluation method as feedback. This incremental and interactive learning framework allows for rapid annotation and subsequent extraction of sparse data while maintaining high accuracy. We evaluate our framework on thr…
Monitoring mobility- and industry-relevant events is important in areas such as personal travel planning and supply chain management, but extracting events pertaining to specific companies, transit routes and locations from heterogeneous, high-volume text streams remains a significant challenge. This work describes a corpus of German-language documents which has been annotated with fine-grained geo-entities, such as streets, stops and routes, as well as standard named entity types. It has also been annotated with a set of 15 traffic- and industry-related n-ary relations and events, such as acc…
Beihang University（北京航空航天大学）；National Computer Network Emergency Response Technical Team/Coordination Center of China（国家计算机网络应急技术处理协调中心）
Entity and relation extraction is a key task in information extraction, where the output can be used for downstream NLP tasks. Existing approaches for entity and relation extraction tasks mainly focus on the English corpora and ignore other languages. Thus, it is critical to improving performance in a multilingual setting. Meanwhile, multilingual training is usually used to boost cross-lingual performance by transferring knowledge from languages (e.g., high-resource) to other (e.g., low-resource) languages. However, language interference usually exists in multilingual tasks as the model parame…
Social media posts contain potentially valuable information about medical conditions and health-related behavior. Biocreative VII Task 3 focuses on mining this information by recognizing mentions of medications and dietary supplements in tweets. We approach this task by fine tuning multiple BERT-style language models to perform token-level classification, and combining them into ensembles to generate final predictions. Our best system consists of five Megatron-BERT-345M models and achieves a strict F1 score of 0.764 on unseen test data.
This paper presents the experiments carried out by us at Jadavpur University as part of the participation in FIRE 2015 task: Entity Extraction from Social Media Text - Indian Languages (ESM-IL). The tool that we have developed for the task is based on Trigram Hidden Markov Model that utilizes information like gazetteer list, POS tag and some other word level features to enhance the observation probabilities of the known tokens as well as unknown tokens. We submitted runs for English only. A statistical HMM (Hidden Markov Models) based model has been used to implement our system. The system has…
Recognizing non-standard entity types and relations, such as B2B products, product classes and their producers, in news and forum texts is important in application areas such as supply chain monitoring and market research. However, there is a decided lack of annotated corpora and annotation guidelines in this domain. In this work, we present a corpus study, an annotation schema and associated guidelines, for the annotation of product entity and company-product relation mentions. We find that although product mentions are often realized as noun phrases, defining their exact extent is difficult …
Span-based joint extraction simultaneously conducts named entity recognition (NER) and relation extraction (RE) in text span form. However, since previous span-based models rely on span-level classifications, they cannot benefit from token-level label information, which has been proven advantageous for the task. In this paper, we propose a Sequence Tagging augmented Span-based Network (STSN), a span-based joint model that can make use of token-level label information. In STSN, we construct a core neural architecture by deep stacking multiple attention layers, each of which consists of three ba…
A.P. Ershov Institute of Informatics Systems SB RAS（俄罗斯科学院西伯利亚分院A.P.叶尔绍夫信息系统研究所）；Novosibirsk State University（新西伯利亚国立大学）
This paper is devoted to the study of methods for information extraction (entity recognition and relation classification) from scientific texts on information technology. Scientific publications provide valuable information into cutting-edge scientific advances, but efficient processing of increasing amounts of data is a time-consuming task. In this paper, several modifications of methods for the Russian language are proposed. It also includes the results of experiments comparing a keyword extraction method, vocabulary method, and some methods based on neural networks. Text collections for the…
We describe the design and use of the CREER dataset, a large corpus annotated with rich English grammar and semantic attributes. The CREER dataset uses the Stanford CoreNLP Annotator to capture rich language structures from Wikipedia plain text. This dataset follows widely used linguistic and semantic annotations so that it can be used for not only most natural language processing tasks but also scaling the dataset. This large supervised dataset can serve as the basis for improving the performance of NLP tasks in the future. We publicize the dataset through the link: https://140.116.82.111/sha…
We introduce globally normalized convolutional neural networks for joint entity classification and relation extraction. In particular, we propose a way to utilize a linear-chain conditional random field output layer for predicting entity types and relations between entities at the same time. Our experiments show that global normalization outperforms a locally normalized softmax layer on a benchmark dataset.
To solve the problem of redundant information and overlapping relations of the entity and relation extraction model, we propose a joint extraction model. This model can directly extract multiple pairs of related entities without generating unrelated redundant information. We also propose a recurrent neural network named Encoder-LSTM that enhances the ability of recurrent units to model sentences. Specifically, the joint model includes three sub-modules: the Named Entity Recognition sub-module consisted of a pre-trained language model and an LSTM decoder layer, the Entity Pair Extraction sub-mo…
