Object recognition has seen significant progress in the image domain, with focus primarily on 2D perception. We propose to leverage existing large-scale datasets of 3D models to understand the underlying 3D structure of objects seen in an image by constructing a CAD-based representation of the objects and their poses. We present Mask2CAD, which jointly detects objects in real-world images and for each detected object, optimizes for the most similar CAD model and its pose. We construct a joint embedding space between the detected regions of an image corresponding to an object and 3D CAD models, enabling retrieval of CAD models for an input RGB image. This produces a clean, lightweight representation of the objects in an image; this CAD-based representation ensures a valid, efficient shape representation for applications such as content creation or interactive scenarios, and makes a step towards understanding the transformation of real-world imagery to a synthetic domain. Experiments on real-world images from Pix3D demonstrate the advantage of our approach in comparison to state of the art. To facilitate future research, we additionally propose a new image-to-3D baseline on ScanNet which features larger shape diversity, real-world occlusions, and challenging image views.
University of North Carolina at Chapel Hill(北卡罗来纳大学教堂山分校)
The accurate segmentation of organs-at-risk (OARs) in head and neck CT images is a critical step for radiation therapy of head and neck cancer patients. However, manual delineation for numerous OARs is time-consuming and laborious, even for expert oncologists. Moreover, manual delineation results are susceptible to high intra- and inter-variability. To this end, we propose a novel dual shape guided network (DSGnet) to automatically delineate nine important OARs in head and neck CT images. To deal with the large shape variation and unclear boundary of OARs in CT images, we represent the organ s…
Medical image segmentation is routinely performed to isolate regions of interest, such as organs and lesions. Currently, deep learning is the state of the art for automatic segmentation, but is usually limited by the need for supervised training with large datasets that have been manually segmented by trained clinicians. The goal of semi-superised and unsupervised image segmentation is to greatly reduce, or even eliminate, the need for training data and therefore to minimze the burden on clinicians when training segmentation models. To this end we introduce a novel network architecture for cap…
In this paper, we introduce a brand new dataset to promote the study of instance segmentation for objects with irregular shapes. Our key observation is that though irregularly shaped objects widely exist in daily life and industrial scenarios, they received little attention in the instance segmentation field due to the lack of corresponding datasets. To fill this gap, we propose iShape, an irregular shape dataset for instance segmentation. iShape contains six sub-datasets with one real and five synthetics, each represents a scene of a typical irregular shape. Unlike most existing instance segm…
Shape-intensity knowledge distillation for robust medical image segmentation
National Engineering Research Center for Multimedia Software(国家多媒体软件工程技术研究中心);School of Computer Science, Wuhan University(武汉大学计算机学院);Hubei Key Laboratory of Multimedia and Network Communication Engineering, Wuhan University(武汉大学多媒体与网络通信工程湖北省重点实验室);Medical Artificial Intelligence Research Institute of Renmin Hospital, Wuhan University(武汉大学人民医院医学人工智能研究院)
In this work we propose to segment the prostate on a challenging dataset of trans-rectal ultrasound (TRUS) images using convolutional neural networks (CNNs) and statistical shape models (SSMs). TRUS is commonly used for a number of image-guided interventions on the prostate. Fast and accurate segmentation on the organ in these images is crucial to planning and fusion with other modalities such as magnetic resonance images (MRIs) . However, TRUS has limited soft tissue contrast and signal to noise ratio which makes the task of segmenting the prostate challenging and subject to inter-observer an…
Shanghai Jiao Tong University(上海交通大学);Johns Hopkins University(约翰斯·霍普金斯大学);East China Normal University(华东师范大学)
Shape information is a strong and valuable prior in segmenting organs in medical images. However, most current deep learning based segmentation algorithms have not taken shape information into consideration, which can lead to bias towards texture. We aim at modeling shape explicitly and using it to help medical image segmentation. Previous methods proposed Variational Autoencoder (VAE) based models to learn the distribution of shape for a particular organ and used it to automatically evaluate the quality of a segmentation prediction by fitting it into the learned shape distribution. Based on w…
The Hong Kong Polytechnic University(香港理工大学);The Chinese University of Hong Kong(香港中文大学);Shenzhen University(深圳大学);Shanghai Jiao Tong University(上海交通大学)
Segmenting overlapping cytoplasm of cells in cervical smear images is a clinically essential task, for quantitatively measuring cell-level features in order to diagnose cervical cancer. This task, however, remains rather challenging, mainly due to the deficiency of intensity (or color) information in the overlapping region. Although shape prior-based models that compensate intensity deficiency by introducing prior shape information (shape priors) about cytoplasm are firmly established, they often yield visually implausible results, mainly because they model shape priors only by limited shape h…
Image co-segmentation is a challenging task in computer vision that aims to segment all pixels of the objects from a predefined semantic category. In real-world cases, however, common foreground objects often vary greatly in appearance, making their global shapes highly inconsistent across images and difficult to be segmented. To address this problem, this paper proposes a novel co-segmentation approach that transfers patch-level local object shapes which appear more consistent across different images. In our framework, a multi-scale patch neighbourhood system is first generated using proposal…
Recent research has seen numerous supervised learning-based methods for 3D shape segmentation and remarkable performance has been achieved on various benchmark datasets. These supervised methods require a large amount of annotated data to train deep neural networks to ensure the generalization ability on the unseen test set. In this paper, we introduce a meta-learning-based method for few-shot 3D shape segmentation where only a few labeled samples are provided for the unseen classes. To achieve this, we treat the shape segmentation as a point labeling problem in the metric space. Specifically,…
University of Oxford(牛津大学);Shanghai Jiao Tong University(上海交通大学);University of Cambridge(剑桥大学)
Semantic segmentation has a broad range of applications, but its real-world impact has been significantly limited by the prohibitive annotation costs necessary to enable deployment. Segmentation methods that forgo supervision can side-step these costs, but exhibit the inconvenient requirement to provide labelled examples from the target distribution to assign concept names to predictions. An alternative line of work in language-image pre-training has recently demonstrated the potential to produce models that can both assign names across large vocabularies of concepts and enable zero-shot trans…
Semantic segmentation using convolutional neural networks (CNNs) is the state-of-the-art for many medical segmentation tasks including left ventricle (LV) segmentation in cardiac MR images. However, a drawback is that these CNNs lack explicit shape constraints, occasionally resulting in unrealistic segmentations. In this paper, we perform LV and myocardial segmentation by regression of pose and shape parameters derived from a statistical shape model. The integrated shape model regularizes predicted segmentations and guarantees realistic shapes. Furthermore, in contrast to semantic segmentation…
Semantic segmentation using convolutional neural networks (CNNs) is the state-of-the-art for many medical image segmentation tasks including myocardial segmentation in cardiac MR images. However, the predicted segmentation maps obtained from such standard CNN do not allow direct quantification of regional shape properties such as regional wall thickness. Furthermore, the CNNs lack explicit shape constraints, occasionally resulting in unrealistic segmentations. In this paper, we use a CNN to predict shape parameters of an underlying statistical shape model of the myocardium learned from a train…
The Hong Kong University of Science and Technology(香港科技大学)
Recent advancements in medical image segmentation techniques have achieved compelling results. However, most of the widely used approaches do not take into account any prior knowledge about the shape of the biomedical structures being segmented. More recently, some works have presented approaches to incorporate shape information. However, many of them are indeed introducing more parameters to the segmentation network to learn the general features, which any segmentation network is able learn, instead of specifically shape features. In this paper, we present a novel approach that seamlessly int…
Myocardium segmentation of late gadolinium enhancement (LGE) Cardiac MR images is important for evaluation of infarction regions in clinical practice. The pathological myocardium in LGE images presents distinctive brightness and textures compared with the healthy tissues, making it much more challenging to be segment. Instead, the balanced-Steady State Free Precession (bSSFP) cine images show clearly boundaries and can be easily segmented. Given this fact, we propose a novel shape-transfer GAN for LGE images, which can 1) learn to generate realistic LGE images from bSSFP with the anatomical sh…
Sabanci University(萨班哲大学);ARM Ltd.(ARM有限公司);University of Zurich(苏黎世大学);University of Utah(犹他大学);Izmir University of Economics(伊兹密尔经济大学);University of Rochester(罗切斯特大学)
Data driven segmentation is an important initial step of shape prior-based segmentation methods since it is assumed that the data term brings a curve to a plausible level so that shape and data terms can then work together to produce better segmentations. When purely data driven segmentation produces poor results, the final segmentation is generally affected adversely. One challenge faced by many existing data terms is due to the fact that they consider only pixel intensities to decide whether to assign a pixel to the foreground or to the background region. When the distributions of the foregr…
SignRR: Retrieve and Refine Real Motion for Sign Language Production
University of Central Florida(中佛罗里达大学);Universidad Nacional Mayor de San Marcos(圣马科斯国立大学);Universidad Catolica San Pablo(圣巴勃罗天主教大学);Marist University(玛瑞斯特大学)
Insel Data Science Center(因塞尔数据科学中心);Inselspital, Bern University Hospital(伯尔尼大学医院因塞尔医院);University of Bern(伯尔尼大学);Support Center for Advanced Neuroimaging (SCAN)(高级神经成像支持中心(SCAN));Institute for Diagnostic and Interventional Neuroradiology(诊断与介入神经放射学研究所)
Volumetric image segmentation with convolutional neural networks (CNNs) encounters several challenges, which are specific to medical images. Among these challenges are large volumes of interest, high class imbalances, and difficulties in learning shape representations. To tackle these challenges, we propose to improve over traditional CNN-based volumetric image segmentation through point-wise classification of point clouds. The sparsity of point clouds allows processing of entire image volumes, balancing highly imbalanced segmentation problems, and explicitly learning an anatomical shape. We b…
IMT Atlantique(IMT大西洋);LaTIM UMR 1101, Inserm(LaTIM UMR 1101,法国国家健康与医学研究院);Symbiosis Centre for Medical Image Analysis, Symbiosis International University(共生国际大学共生医学图像分析中心);Fondation ILDYS(ILDYS基金会)
Automatic segmentation of the musculoskeletal system in pediatric magnetic resonance (MR) images is a challenging but crucial task for morphological evaluation in clinical practice. We propose a deep learning-based regularized segmentation method for multi-structure bone delineation in MR images, designed to overcome the inherent scarcity and heterogeneity of pediatric data. Based on a newly devised shape code discriminator, our adversarial regularization scheme enforces the deep network to follow a learnt shape representation of the anatomy. The novel shape priors based adversarial regulariza…
Segmenting images of low quality or with missing data is a challenging problem. Integrating statistical prior information about the shapes to be segmented can improve the segmentation results significantly. Most shape-based segmentation algorithms optimize an energy functional and find a point estimate for the object to be segmented. This does not provide a measure of the degree of confidence in that result, neither does it provide a picture of other probable solutions based on the data and the priors. With a statistical view, addressing these issues would involve the problem of characterizing…
Scientific Computing and Imaging Institute, University of Utah(犹他大学科学计算与成像研究所);School of Computing, University of Utah(犹他大学计算学院)
Statistical shape modeling is an essential tool for the quantitative analysis of anatomical populations. Point distribution models (PDMs) represent the anatomical surface via a dense set of correspondences, an intuitive and easy-to-use shape representation for subsequent applications. These correspondences are exhibited in two coordinate spaces: the local coordinates describing the geometrical features of each individual anatomical surface and the world coordinates representing the population-level statistical shape information after removing global alignment differences across samples in the …
Cancer Hospital of University of the Chinese Academy of Sciences (Zhejiang Cancer Hospital)(中国科学院大学附属肿瘤医院(浙江省肿瘤医院));Rutgers University(罗格斯大学);The Chinese University of Hong Kong(香港中文大学);SenseTime Research(商汤科技研究院)
Radiotherapy is a treatment where radiation is used to eliminate cancer cells. The delineation of organs-at-risk (OARs) is a vital step in radiotherapy treatment planning to avoid damage to healthy organs. For nasopharyngeal cancer, more than 20 OARs are needed to be precisely segmented in advance. The challenge of this task lies in complex anatomical structure, low-contrast organ contours, and the extremely imbalanced size between large and small organs. Common segmentation methods that treat them equally would generally lead to inaccurate small-organ labeling. We propose a novel two-stage de…
School of Electrical and Data Engineering, University of Technology Sydney(悉尼科技大学电气与数据工程学院);Harbin Institute of Technology(哈尔滨工业大学)
Existing methods for single-view 3D object reconstruction directly learn to transform image features into 3D representations. However, these methods are vulnerable to images containing noisy backgrounds and heavy occlusions because the extracted image features do not contain enough information to reconstruct high-quality 3D shapes. Humans routinely use incomplete or noisy visual cues from an image to retrieve similar 3D shapes from their memory and reconstruct the 3D shape of an object. Inspired by this, we propose a novel method, named Mem3D, that explicitly constructs shape priors to supplem…
IMT Atlantique(大西洋国立高等矿业电信学院);LaTIM UMR 1101, Inserm(法国国家健康与医学研究院 1101 联合研究单位(医学影像治疗实验室))
This paper proposes an automatic method for scapula bone segmentation from Magnetic Resonance (MR) images using deep learning. The purpose of this work is to incorporate anatomical priors into a conditional adversarial framework, given a limited amount of heterogeneous annotated images. Our approach encourages the segmentation model to follow the global anatomical properties of the underlying anatomy through a learnt non-linear shape representation while the adversarial contribution refines the model by promoting realistic delineations. These contributions are evaluated on a dataset of 15 pedi…
We present FourierNet, a single shot, anchor-free, fully convolutional instance segmentation method that predicts a shape vector. Consequently, this shape vector is converted into the masks' contour points using a fast numerical transform. Compared to previous methods, we introduce a new training technique, where we utilize a differentiable shape decoder, which manages the automatic weight balancing of the shape vector's coefficients. We used the Fourier series as a shape encoder because of its coefficient interpretability and fast implementation. FourierNet shows promising results compared to…
Simon Fraser University(西蒙弗雷泽大学);Adobe Research(奥多比研究院);IIT Bombay(印度理工学院孟买分校)
We treat shape co-segmentation as a representation learning problem and introduce BAE-NET, a branched autoencoder network, for the task. The unsupervised BAE-NET is trained with a collection of un-segmented shapes, using a shape reconstruction loss, without any ground-truth labels. Specifically, the network takes an input shape and encodes it using a convolutional neural network, whereas the decoder concatenates the resulting feature code with a point coordinate and outputs a value indicating whether the point is inside/outside the shape. Importantly, the decoder is branched: each branch learn…
Indian Institute of Technology Kharagpur(印度理工学院卡拉格普尔分校)
In this work, we propose a new segmentation algorithm for images containing convex objects present in multiple shapes with a high degree of overlap. The proposed algorithm is carried out in two steps, first we identify the visible contours, segment them using concave points and finally group the segments belonging to the same object. The next step is to assign a shape identity to these grouped contour segments. For images containing objects in multiple shapes we begin first by identifying shape classes of the contours followed by assigning a shape entity to these classes. We provide a comprehe…
School of Data Science, Fudan University(复旦大学数据科学学院)
Cardiac segmentation from late gadolinium enhancement MRI is an important task in clinics to identify and evaluate the infarction of myocardium. The automatic segmentation is however still challenging, due to the heterogeneous intensity distributions and indistinct boundaries in the images. In this paper, we propose a new method, based on deep neural networks (DNN), for fully automatic segmentation. The proposed network, referred to as SRSCN, comprises a shape reconstruction neural network (SRNN) and a spatial constraint network (SCN). SRNN aims to maintain a realistic shape of the resulting s…
Memorial Sloan Kettering Cancer Center(纪念斯隆凯特琳癌症中心)
Image-guided adaptive lung radiotherapy requires accurate tumor and organs segmentation from during treatment cone-beam CT (CBCT) images. Thoracic CBCTs are hard to segment because of low soft-tissue contrast, imaging artifacts, respiratory motion, and large treatment induced intra-thoracic anatomic changes. Hence, we developed a novel Patient-specific Anatomic Context and Shape prior or PACS-aware 3D recurrent registration-segmentation network for longitudinal thoracic CBCT segmentation. Segmentation and registration networks were concurrently trained in an end-to-end framework and implemente…
Deep Distance Map Regression Network with Shape-aware Loss for Imbalanced Medical Image Segmentation
Beijing Institute of Technology(北京理工大学);School of Computer Science(计算机学院);Beijing Lab of Intelligent Information Technology(北京智能信息技术实验室);Chinese Academy of Medical Sciences(北京协和医学院(中国医学科学院))
In this paper, we propose a novel top-down instance segmentation framework based on explicit shape encoding, named \textbf{ESE-Seg}. It largely reduces the computational consumption of the instance segmentation by explicitly decoding the multiple object shapes with tensor operations, thus performs the instance segmentation at almost the same speed as the object detection. ESE-Seg is based on a novel shape signature Inner-center Radius (IR), Chebyshev polynomial fitting and the strong modern object detectors. ESE-Seg with YOLOv3 outperforms the Mask R-CNN on Pascal VOC 2012 at mAP$^r$@0.5 while…
Peter Munk Cardiac Center(彼得·芒克心脏中心);University of Toronto(多伦多大学);Vector Institute(向量研究所);University of Waterloo(滑铁卢大学)
Medical image segmentation is a difficult but important task for many clinical operations such as cardiac bi-ventricular volume estimation. More recently, there has been a shift to utilizing deep learning and fully convolutional neural networks (CNNs) to perform image segmentation that has yielded state-of-the-art results in many public benchmark datasets. Despite the progress of deep learning in medical image segmentation, standard CNNs are still not fully adopted in clinical settings as they lack robustness and interpretability. Shapes are generally more meaningful features than solely textu…
Beijing Normal University(北京师范大学);Hong Kong Baptist University(香港浸会大学)
We use Deep Convolutional Neural Networks (DCNNs) for image segmentation problems. DCNNs can well extract the features from natural images. However, the classification functions in the existing network architecture of CNNs are simple and lack capabilities to handle important spatial information in a way that have been done for many well-known traditional variational models. Prior such as spatial regularity, volume prior and object shapes cannot be well handled by existing DCNNs. We propose a novel Soft Threshold Dynamics (STD) framework which can easily integrate many spatial priors of the cla…
Fudan University(复旦大学);University of Oxford(牛津大学);Chung-Ang University(中央大学)
Cardiac segmentation is in great demand for clinical practice. Due to the enormous labor of manual delineation, unsupervised segmentation is desired. The ill-posed optimization problem of this task is inherently challenging, requiring well-designed constraints. In this work, we propose an unsupervised framework for multi-class segmentation with both intensity and shape constraints. Firstly, we extend a conventional non-convex energy function as an intensity constraint and implement it with U-Net. For shape constraint, synthetic images are generated from anatomical labels via image-to-image tra…
Shape priors have been widely utilized in medical image segmentation to improve segmentation accuracy and robustness. A major way to encode such a prior shape model is to use a mesh representation, which is prone to causing self-intersection or mesh folding. Those problems require complex and expensive algorithms to mitigate. In this paper, we propose a novel shape prior directly embedded in the voxel grid space, based on gradient vector flows of a pre-segmentation. The flexible and powerful prior shape representation is ready to be extended to simultaneously segmenting multiple interacting ob…
ShanghaiTech University(上海科技大学);Shanghai Engineering Research Center of Intelligent Vision and Imaging(上海市智能视觉与成像工程技术研究中心)
Semi-supervised learning has attracted much attention in medical image segmentation due to challenges in acquiring pixel-wise image annotations, which is a crucial step for building high-performance deep learning methods. Most existing semi-supervised segmentation approaches either tend to neglect geometric constraint in object segments, leading to incomplete object coverage, or impose strong shape prior that requires extra alignment. In this work, we propose a novel shapeaware semi-supervised segmentation strategy to leverage abundant unlabeled data and to enforce a geometric shape constraint…
Instance segmentation aims to detect and segment individual objects in a scene. Most existing methods rely on precise mask annotations of every category. However, it is difficult and costly to segment objects in novel categories because a large number of mask annotations is required. We introduce ShapeMask, which learns the intermediate concept of object shape to address the problem of generalization in instance segmentation to novel categories. ShapeMask starts with a bounding box detection and gradually refines it by first estimating the shape of the detected object through a collection of s…
We introduce a novel 3D object proposal approach named Generative Shape Proposal Network (GSPN) for instance segmentation in point cloud data. Instead of treating object proposal as a direct bounding box regression problem, we take an analysis-by-synthesis strategy and generate proposals by reconstructing shapes from noisy observations in a scene. We incorporate GSPN into a novel 3D instance segmentation framework named Region-based PointNet (R-PointNet) which allows flexible proposal refinement and instance segmentation generation. We achieve state-of-the-art performance on several 3D instanc…
Rivian Automotive LLC;Georgia Institute of Technology(佐治亚理工学院)
This paper proposes a novel training model based on shape and appearance features for object segmentation in images and videos. Whereas most such models rely on two-dimensional appearance templates or a finite set of descriptors, our appearance-based feature is a one-dimensional function, which is efficiently coupled with the object's shape by integrating intensities along the object's iso-contours. Joint PCA training on these shape and appearance features further exploits shape-appearance correlations and the resulting training model is incorporated in an active-contour-type energy functional…
High-level shape understanding and technique evaluation on large repositories of 3D shapes often benefit from additional information known about the shapes. One example of such information is the semantic segmentation of a shape into functional or meaningful parts. Generating accurate segmentations with meaningful segment boundaries is, however, a costly process, typically requiring large amounts of user time to achieve high quality results. In this paper we present an active learning framework for large dataset segmentation, which iteratively provides the user with new predictions by training…
ShapeMamba-EM: Fine-Tuning Foundation Model with Local Shape Descriptors and Mamba Blocks for 3D EM Image Segmentation
National Engineering Research Center of Visual Technology(国家视觉工程研究中心);School of Computer Science, Peking University(北京大学计算机学院);State Key Laboratory of Multimedia Information Processing(多媒体信息处理国家重点实验室);National Biomedical Imaging Center, Peking University(北京大学生物医学成像中心);Peng Cheng Laboratory(鹏城实验室)
Imperial College London(帝国理工学院);Samsung AI Centre(三星人工智能中心)
Semantic segmentation of eyes has long been a vital pre-processing step in many biometric applications. Majority of the works focus only on high resolution eye images, while little has been done to segment the eyes from low quality images in the wild. However, this is a particularly interesting and meaningful topic, as eyes play a crucial role in conveying the emotional state and mental well-being of a person. In this work, we take two steps toward solving this problem: (1) We collect and annotate a challenging eye segmentation dataset containing 8882 eye patches from 4461 facial images of dif…
Sabanci University(萨班哲大学);ARM Ltd.(ARM公司);University of Utah(犹他大学);University of Rochester(罗切斯特大学)
In this paper, we propose an efficient pseudo-marginal Markov chain Monte Carlo (MCMC) sampling approach to draw samples from posterior shape distributions for image segmentation. The computation time of the proposed approach is independent from the size of the training set used to learn the shape prior distribution nonparametrically. Therefore, it scales well for very large data sets. Our approach is able to characterize the posterior probability density in the space of shapes through its samples, and to return multiple solutions, potentially from different modes of a multimodal probability d…
Imperial College London(帝国理工学院);Royal Brompton Hospital(皇家布朗普顿医院)
Myocardial contrast echocardiography (MCE) is an imaging technique that assesses left ventricle function and myocardial perfusion for the detection of coronary artery diseases. Automatic MCE perfusion quantification is challenging and requires accurate segmentation of the myocardium from noisy and time-varying images. Random forests (RF) have been successfully applied to many medical image segmentation tasks. However, the pixel-wise RF classifier ignores contextual relationships between label outputs of individual pixels. RF which only utilizes local appearance features is also susceptible to …
University of Bern(伯尔尼大学);RetinAI Medical GmbH(RetinAI Medical 公司);Bern University Hospital(伯尔尼大学医院)
The automatic segmentation of retinal layer structures enables clinically-relevant quantification and monitoring of eye disorders over time in OCT imaging. Eyes with late-stage diseases are particularly challenging to segment, as their shape is highly warped due to pathological biomarkers. In this context, we propose a novel fully Convolutional Neural Network (CNN) architecture which combines dilated residual blocks in an asymmetric U-shape configuration, and can segment multiple layers of highly pathological eyes in one shot. We validate our approach on a dataset of late-stage AMD patients an…
University of Oxford(牛津大学);Samsung Research America(三星美国研究院);FiveAI Ltd.(FiveAI有限公司)
Instance segmentation is an important problem in computer vision, with applications in autonomous driving, drone navigation and robotic manipulation. However, most existing methods are not real-time, complicating their deployment in time-sensitive contexts. In this work, we extend an existing approach to real-time instance segmentation, called `Straight to Shapes' (STS), which makes use of low-dimensional shape embedding spaces to directly regress to object shape masks. The STS model can run at 35 FPS on a high-end desktop, but its accuracy is significantly worse than that of offline state-of-…
School of Information Science and Technology, ShanghaiTech University(上海科技大学信息科学与技术学院);Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Sciences(中国科学院上海微系统与信息技术研究所);University of Chinese Academy of Sciences(中国科学院大学);Shanghai Engineering Research Center of Intelligent Vision and Imaging(上海智能视觉与成像工程技术研究中心)
Weakly supervised segmentation is an important problem in medical image analysis due to the high cost of pixelwise annotation. Prior methods, while often focusing on weak labels of 2D images, exploit few structural cues of volumetric medical images. To address this, we propose a novel weakly-supervised segmentation strategy capable of better capturing 3D shape prior in both model prediction and learning. Our main idea is to extract a self-taught shape representation by leveraging weak labels, and then integrate this representation into segmentation prediction for shape refinement. To this end,…