We simulate the dynamics of a single circle microswimmer exploring a disordered array of fixed obstacles. The interplay of two different types of randomness, quenched disorder and stochastic noise, is investigated to unravel their impact on the transport properties. We compute lines of isodiffusivity as a function of the rotational diffusion coefficient and the obstacle density. We find that increasing noise or disorder tends to amplify diffusion, yet for large randomness the competition leads to a strong suppression of transport. We rationalize both the suppression and amplification of transport by comparing the relevant time scales of the free motion to the mean period between collisions with obstacles.
Microswimmers are exposed in nature to crowded environments and their transport properties depend in a subtle way on the interaction with obstacles. Here, we investigate a model for a single ideal circle swimmer exploring a two-dimensional disordered array of impenetrable obstacles. The microswimmer moves on circular orbits in the freely accessible space and follows the surface of an obstacle for a certain time upon collision. Depending on the obstacle density and the radius of the circular orbits, the microswimmer displays either long-range transport or is localized in a finite region. We sho…
Microscopic swimmers, e.g., chemotactic bacteria and cells, are capable of directed motion by exerting a force on their environment. For asymmetric microswimmers, e.g., bacteria, spermatozoa and many artificial active colloidal particles, a torque is also present leading in two dimensions to circular motion and in three dimensions to helicoidal motion with a well-defined chirality. Here, we demonstrate with numerical simulations in two dimensions how the chirality of circular motion couples to chiral features present in the microswimmer environment. Levogyre and dextrogyre microswimmers as sma…
We study the dynamics of a prolate spheroidal microswimmer in Poiseuille flow for different flow geometries. When moving between two parallel plates or in a cylindrical microchannel, the swimmer performs either periodic swinging or periodic tumbling motion. Although the trajectories of spherical and elongated swimmers are qualitatively similar, the swinging and tumbling frequency strongly depends on the aspect ratio of the swimmer. In channels with reduced symmetry the swimmers perform quasiperiodic motion which we demonstrate explicitely for swimming in a channel with elliptical cross section…
Locomotion and transport of microorganisms in fluids is an essential aspect of life. Search for food, orientation toward light, spreading of off-spring, and the formation of colonies are only possible due to locomotion. Swimming at the microscale occurs at low Reynolds numbers, where fluid friction and viscosity dominates over inertia. Here, evolution achieved propulsion mechanisms, which overcome and even exploit drag. Prominent propulsion mechanisms are rotating helical flagella, exploited by many bacteria, and snake-like or whip-like motion of eukaryotic flagella, utilized by sperm and alga…
Disorder-induced persistent random motion and trapping of microswimmers
Max Planck Institute for the Physics of Complex Systems（马克斯·普朗克复杂系统物理研究所）；Institute of Numerical Mathematics and Optimization, Technische Universität Bergakademie Freiberg（弗莱贝格工业大学数值数学与优化研究所）；Faculty of Informatics/Mathematics, HTW Dresden（德累斯顿应用技术大学信息/数学学院）；Center for Systems Biology Dresden（德累斯顿系统生物学中心）；Cluster of Excellence, Physics of Life, TU Dresden（德累斯顿工业大学“生命物理学”卓越集群）
The behavior of living systems is based on the experience they gained through their interactions with the environment [1]. This experience is stored in the complex biochemical networks of cells and organisms to provide a relationship between a sensed situation and what to do in this situation [2-4]. An implementation of such processes in artificial systems has been achieved through different machine learning algorithms [5, 6]. However, for microscopic systems such as artificial microswimmers which mimic propulsion as one of the basic functionalities of living systems [7, 8] such adaptive behav…
Microswimmers are active particles of microscopic size that self-propel by setting the surrounding fluid into motion. According to the kind of far-field fluid flow that they induce, they are classified into pushers and pullers. Many studies have explored similarities and differences between suspensions of either pushers or pullers, but the behavior of mixtures of the two is still to be investigated. Here, we rely on a minimal discrete microswimmer model, particle-resolved, including hydrodynamic interactions, to examine the orientational ordering in such binary pusher-puller mixtures. In agree…
In this letter we propose a kinematic model to show how collisions with a surface and rotational Brownian motion give rise to the accumulation of micro-swimmers near a surface. In this model, an elongated microswimmer invariably travels parallel to the surface after hitting it from any incident angle. It then swims away from the surface after some time, facilitated by rotational Brownian motion. Simulations based on this model reproduce the density distributions measured for the small bacteria E. coli and Caulobacter crescentus, as well as for the much larger bull spermatozoa swimming in confi…
We report on dynamic properties of a simple model microswimmer composed of three spheres and propelling itself in a viscous fluid by spinning motion of the spheres under zero net torque constraint. At a fixed temperature and increasing the spinning frequency, the swimmer demonstrates a transition from dissipation-dominated to a pumping-dominated motion regime characterized by negative effective friction coefficient. In the limit of high frequencies, the diffusion of the swimmer can be described by a model of an active particle with constant velocity.
Tracer particles immersed in suspensions of biological microswimmers such as E. coli or C. reinhardtii display phenomena unseen in conventional equilibrium systems, including strongly enhanced diffusivity relative to the Brownian value and non-Gaussian displacement statistics. In dilute, 3-dimensional suspensions, these phenomena have typically been explained by the hydrodynamic advection of point tracers by isolated microswimmers, while, at higher concentrations, correlations between pusher microswimmers such as E. coli can increase the effective diffusivity even further. Anisotropic tracers …
Microswimmer suspensions self-organize into complex spatio-temporal flow patterns, including vortex lattices and mesoscale turbulence. Here we explore the consequences for the motion of passive tracers, based on a continuum model for the microswimmer velocity field. We observe two qualitatively different regimes distinguished via the dimensionless Kubo number $K$. At advection strengths right above the transition to turbulence, the flow field evolves very slowly ($K \gg 1$) and the spatial vortex structures lead to dominant trapping effects. In contrast, deep in the turbulent state, much faste…
We design new navigation strategies for travel time optimization of microscopic self-propelled particles in complex and noisy environments. In contrast to strategies relying on the results of optimal control theory, these protocols allow for semi-autonomous navigation as they do not require control over the microswimmer motion via external feedback loops. Although the strategies we propose rely on simple principles, they show arrival time statistics strikingly similar to those obtained from stochastic optimal control theory, as well as performances that are robust to environmental changes and …
Alignment-Induced Self-Organization of Autonomously Steering Microswimmers: Turbulence, Vortices, and Jets
Forschungszentrum Jülich（于利希研究中心）；Peter Grünberg Institute（彼得·格林贝格研究所）；Jülich Centre for Neutron Science（于利希中子科学中心）；Institute for Advanced Simulation（高级模拟研究所）
Many microorganisms, with phytoplankton and zooplankton as prominent examples, display phototactic behaviour, that is, the ability to perform directed motion within a light gradient. Here we experimentally demonstrate that sensing of light gradients can also be achieved in a system of synthetic photo-activated microparticles being exposed to an inhomogeneous laser field. We observe a strong orientational response of the particles because of diffusiophoretic torques, which in combination with an intensity-dependent particle motility eventually leads to phototaxis. Since the aligning torques sat…
We consider the tracer diffusion $D_{rr}$ that arises from the run-and-tumble motion of low Reynolds number swimmers, such as bacteria. Assuming a dilute suspension, where the bacteria move in uncorrelated runs of length $λ$, we obtain an exact expression for $D_{rr}$ for dipolar swimmers in three dimensions, hence explaining the surprising result that this is independent of $λ$. We compare $D_{rr}$ to the contribution to tracer diffusion from entrainment.
We consider a microswimmer that moves in two dimensions at a constant speed and changes the direction of its motion due to a torque consisting of a constant and a fluctuating component. The latter will be modeled by a symmetric Lévy-stable ($α$-stable) noise. The purpose is to develop a kinetic approach to eliminate the angular component of the dynamics in order to find a coarse grained description in the coordinate space. By defining the joint probability density function of the position and of the orientation of the particle through the Fokker-Planck equation, we derive transport equations f…
We discuss the path of a tracer particle as a microswimmer moves past on an infinite straight trajectory. If the tracer is sufficiently far from the path of the swimmer it moves in a closed loop. As the initial distance between the tracer and the path of the swimmer $ρ$ decreases, the tracer is displaced a small distance backwards (relative to the direction of the swimmer velocity). For much smaller tracer-swimmer separations, however, the tracer displacement becomes positive and diverges as $ρ\to 0$. To quantify this behaviour we calculate the Darwin drift, the total volume swept out by a mat…
The hydrodynamic flow field generated by self-propelled active particles and swimming microorganisms is strongly altered by the presence of nearby boundaries in a viscous flow. Using a simple model three-linked sphere swimmer, we show that the swimming trajectories near a no-slip wall reveal various scenarios of motion depending on the initial orientation and the distance separating the swimmer from the wall. We find that the swimmer can either be trapped by the wall, completely escape, or perform an oscillatory gliding motion at a constant mean height above the wall. Using a far-field approxi…
Near a solid boundary, E. coli swims in clockwise circular motion. We provide a hydrodynamic model for this behavior. We show that circular trajectories are natural consequences of force-free and torque-free swimming, and the hydrodynamic interactions with the boundary, which also leads to a hydrodynamic trapping of the cells close to the surface. We compare the results of the model with experimental data and obtain reasonable agreement. In particular, we show that the radius of curvature of the trajectory increases with the length of the bacterium body.
Hardly any real self-propelling or actively driven object is perfect. Thus, undisturbed motion will generally not follow straight lines but rather circular trajectories. We here address self-propelled or actively driven objects that move in discrete steps and additionally tempt to migrate towards a certain direction by discrete angular adjustment. Overreaction in the angular alignment is possible. This competition implies pronounced nonlinear dynamics including period doubling and chaotic behavior in a broad parameter regime. Such behavior directly affects the appearance of the trajectories, a…
