Multitask Gaussian processes (MTGP) are the Gaussian process (GP) framework's solution for multioutput regression problems in which the $T$ elements of the regressors cannot be considered conditionally independent given the observations. Standard MTGP models assume that there exist both a multitask covariance matrix as a function of an intertask matrix, and a noise covariance matrix. These matrices need to be approximated by a low rank simplification of order $P$ in order to reduce the number of parameters to be learnt from $T^2$ to $TP$. Here we introduce a novel approach that simplifies the multitask learning by reducing it to a set of conditioned univariate GPs without the need for any low rank approximations, therefore completely eliminating the requirement to select an adequate value for hyperparameter $P$. At the same time, by extending this approach with both a hierarchical and an approximate model, the proposed extensions are capable of recovering the multitask covariance and noise matrices after learning only $2T$ parameters, avoiding the validation of any model hyperparameter and reducing the overall complexity of the model as well as the risk of overfitting. Experimental results over synthetic and real problems confirm the advantages of this inference approach in its ability to accurately recover the original noise and signal matrices, as well as the achieved performance improvement in comparison to other state of art MTGP approaches. We have also integrated the model with standard GP toolboxes, showing that it is computationally competitive with state of the art options.
University College London（伦敦大学学院）；SoundCloud Ltd.（SoundCloud有限公司）；University of Potsdam（波茨坦大学）
We study learning problems in which the conditional distribution of the output given the input varies as a function of additional task variables. In varying-coefficient models with Gaussian process priors, a Gaussian process generates the functional relationship between the task variables and the parameters of this conditional. Varying-coefficient models subsume hierarchical Bayesian multitask models, but also generalizations in which the conditional varies continuously, for instance, in time or space. However, Bayesian inference in varying-coefficient models is generally intractable. We show …
We present a novel approach for constrained Bayesian inference. Unlike current methods, our approach does not require convexity of the constraint set. We reduce the constrained variational inference to a parametric optimization over the feasible set of densities and propose a general recipe for such problems. We apply the proposed constrained Bayesian inference approach to multitask learning subject to rank constraints on the weight matrix. Further, constrained parameter estimation is applied to recover the sparse conditional independence structure encoded by prior precision matrices. Our appr…
We propose a novel hierarchical model for multitask bipartite ranking. The proposed approach combines a matrix-variate Gaussian process with a generative model for task-wise bipartite ranking. In addition, we employ a novel trace constrained variational inference approach to impose low rank structure on the posterior matrix-variate Gaussian process. The resulting posterior covariance function is derived in closed form, and the posterior mean function is the solution to a matrix-variate regression with a novel spectral elastic net regularizer. Further, we show that variational inference for the…
The University of Sydney（悉尼大学）；CSIRO（澳大利亚联邦科学与工业研究组织）；NVIDIA（英伟达）
In likelihood-free settings where likelihood evaluations are intractable, approximate Bayesian computation (ABC) addresses the formidable inference task to discover plausible parameters of simulation programs that explain the observations. However, they demand large quantities of simulation calls. Critically, hyperparameters that determine measures of simulation discrepancy crucially balance inference accuracy and sample efficiency, yet are difficult to tune. In this paper, we present kernel embedding likelihood-free inference (KELFI), a holistic framework that automatically learns model hyper…
While deep neural networks provide good performance for a range of challenging tasks, calibration and uncertainty estimation remain major challenges, especially under distribution shift. In this paper, we propose the amortized conditional normalized maximum likelihood (ACNML) method as a scalable general-purpose approach for uncertainty estimation, calibration, and out-of-distribution robustness with deep networks. Our algorithm builds on the conditional normalized maximum likelihood (CNML) coding scheme, which has minimax optimal properties according to the minimum description length principl…
Recent advances in conditional image generation tasks, such as image-to-image translation and image inpainting, are largely accounted to the success of conditional GAN models, which are often optimized by the joint use of the GAN loss with the reconstruction loss. However, we reveal that this training recipe shared by almost all existing methods causes one critical side effect: lack of diversity in output samples. In order to accomplish both training stability and multimodal output generation, we propose novel training schemes with a new set of losses named moment reconstruction losses that si…
While energy-based models (EBMs) exhibit a number of desirable properties, training and sampling on high-dimensional datasets remains challenging. Inspired by recent progress on diffusion probabilistic models, we present a diffusion recovery likelihood method to tractably learn and sample from a sequence of EBMs trained on increasingly noisy versions of a dataset. Each EBM is trained with recovery likelihood, which maximizes the conditional probability of the data at a certain noise level given their noisy versions at a higher noise level. Optimizing recovery likelihood is more tractable than …
Classifiers based on probabilistic graphical models are very effective. In continuous domains, maximum likelihood is usually used to assess the predictions of those classifiers. When data is scarce, this can easily lead to overfitting. In any probabilistic setting, Bayesian averaging (BA) provides theoretically optimal predictions and is known to be robust to overfitting. In this work we introduce Bayesian Conditional Gaussian Network Classifiers, which efficiently perform exact Bayesian averaging over the parameters. We evaluate the proposed classifiers against the maximum likelihood alternat…
Vector Institute for Artificial Intelligence（向量人工智能研究院）；University of Toronto（多伦多大学）
In this paper, we describe the "implicit autoencoder" (IAE), a generative autoencoder in which both the generative path and the recognition path are parametrized by implicit distributions. We use two generative adversarial networks to define the reconstruction and the regularization cost functions of the implicit autoencoder, and derive the learning rules based on maximum-likelihood learning. Using implicit distributions allows us to learn more expressive posterior and conditional likelihood distributions for the autoencoder. Learning an expressive conditional likelihood distribution enables t…
Capital Fund Management（资本基金管理公司）；Society of Fellows, Harvard University（哈佛大学 fellows 会）；Machine Learning Lab（机器学习实验室）；Courant Institute of Mathematical Sciences, New York University（纽约大学应用数学科学研究所）
The University of New South Wales（新南威尔士大学）；CSIRO’s Data61（澳大利亚联邦科学与工业研究组织数据61研究所）
Conditional Neural Processes~(CNPs) formulate distributions over functions and generate function observations with exact conditional likelihoods. CNPs, however, have limited expressivity for high-dimensional observations, since their predictive distribution is factorized into a product of unconstrained (typically) Gaussian outputs. Previously, this could be handled using latent variables or autoregressive likelihood, but at the expense of intractable training and quadratically increased complexity. Instead, we propose calibrating CNPs with an adversarial training scheme besides regular maximum…
It has been argued that in supervised classification tasks, in practice it may be more sensible to perform model selection with respect to some more focused model selection score, like the supervised (conditional) marginal likelihood, than with respect to the standard marginal likelihood criterion. However, for most Bayesian network models, computing the supervised marginal likelihood score takes exponential time with respect to the amount of observed data. In this paper, we consider diagnostic Bayesian network classifiers where the significant model parameters represent conditional distributi…
Inverted AI（Inverted AI公司）；University of British Columbia（不列颠哥伦比亚大学）；Mila（米拉研究所）
We present a novel, conditional generative probabilistic model of set-valued data with a tractable log density. This model is a continuous normalizing flow governed by permutation equivariant dynamics. These dynamics are driven by a learnable per-set-element term and pairwise interactions, both parametrized by deep neural networks. We illustrate the utility of this model via applications including (1) complex traffic scene generation conditioned on visually specified map information, and (2) object bounding box generation conditioned directly on images. We train our model by maximizing the exp…
Likelihood-free inference refers to inference when a likelihood function cannot be explicitly evaluated, which is often the case for models based on simulators. Most of the literature is based on sample-based `Approximate Bayesian Computation' methods, but recent work suggests that approaches based on deep neural conditional density estimators can obtain state-of-the-art results with fewer simulations. The neural approaches vary in how they choose which simulations to run and what they learn: an approximate posterior or a surrogate likelihood. This work provides some direct controlled comparis…
University of California, Berkeley（加州大学伯克利分校）；University of Toronto（多伦多大学）；Nanjing University（南京大学）
Many tasks in computer vision and graphics fall within the framework of conditional image synthesis. In recent years, generative adversarial nets (GANs) have delivered impressive advances in quality of synthesized images. However, it remains a challenge to generate both diverse and plausible images for the same input, due to the problem of mode collapse. In this paper, we develop a new generic multimodal conditional image synthesis method based on Implicit Maximum Likelihood Estimation (IMLE) and demonstrate improved multimodal image synthesis performance on two tasks, single image super-resol…
Bayesian properties of the signed root likelihood ratio statistic are analysed. Conditions for first-order probability matching are derived by the examination of the Bayesian posterior and frequentist means of this statistic. Second-order matching conditions are shown to arise from matching of the Bayesian posterior and frequentist variances of a mean-adjusted version of the signed root statistic. Conditions for conditional probability matching in ancillary statistic models are derived and discussed.
Typical Bayesian methods for models with latent variables (or random effects) involve directly sampling the latent variables along with the model parameters. In high-level software code for model definitions (using, e.g., BUGS, JAGS, Stan), the likelihood is therefore specified as conditional on the latent variables. This can lead researchers to perform model comparisons via conditional likelihoods, where the latent variables are considered model parameters. In other settings, however, typical model comparisons involve marginal likelihoods where the latent variables are integrated out. This di…
We reveal the relations between the conditional normalized maximum likelihood (CNML) distributions and Bayesian predictive densities based on the latent information priors (LIPs). In particular, CNML3, which is one type of CNML distributions, is investigated. The Bayes projection of a predictive density, which is an information projection of the predictive density on a set of Bayesian predictive densities, is considered. We prove that the sum of the Bayes projection divergence of CNML3 and the conditional mutual information is asymptotically constant. This result implies that the Bayes project…
The Integrated Completed Likelihood (ICL) criterion has been proposed by Biernacki et al. (2000) in the model-based clustering framework to select a relevant number of classes and has been used by statisticians in various application areas. A theoretical study of this criterion is proposed. A contrast related to the clustering objective is introduced: the conditional classification likelihood. This yields an estimator and a model selection criteria class. The properties of these new procedures are studied and ICL is proved to be an approximation of one of these criteria. We oppose these result…
There has been much recent, exciting work on combining the complementary strengths of latent variable models and deep learning. Latent variable modeling makes it easy to explicitly specify model constraints through conditional independence properties, while deep learning makes it possible to parameterize these conditional likelihoods with powerful function approximators. While these "deep latent variable" models provide a rich, flexible framework for modeling many real-world phenomena, difficulties exist: deep parameterizations of conditional likelihoods usually make posterior inference intrac…
Many statistical models can be simulated forwards but have intractable likelihoods. Approximate Bayesian Computation (ABC) methods are used to infer properties of these models from data. Traditionally these methods approximate the posterior over parameters by conditioning on data being inside an $ε$-ball around the observed data, which is only correct in the limit $ε\!\rightarrow\!0$. Monte Carlo methods can then draw samples from the approximate posterior to approximate predictions or error bars on parameters. These algorithms critically slow down as $ε\!\rightarrow\!0$, and in practice draw …
Rice University（莱斯大学）；NVIDIA（英伟达）；University of Toronto（多伦多大学）；California Institute of Technology（加州理工学院）
Continuous Normalizing Flows (CNFs) have emerged as promising deep generative models for a wide range of tasks thanks to their invertibility and exact likelihood estimation. However, conditioning CNFs on signals of interest for conditional image generation and downstream predictive tasks is inefficient due to the high-dimensional latent code generated by the model, which needs to be of the same size as the input data. In this paper, we propose InfoCNF, an efficient conditional CNF that partitions the latent space into a class-specific supervised code and an unsupervised code that shared among …
Bayesian network (BN) structure learning from complete data has been extensively studied in the literature. However, fewer theoretical results are available for incomplete data, and most are related to the Expectation-Maximisation (EM) algorithm. Balov (2013) proposed an alternative approach called Node-Average Likelihood (NAL) that is competitive with EM but computationally more efficient; and he proved its consistency and model identifiability for discrete BNs. In this paper, we give general sufficient conditions for the consistency of NAL; and we prove consistency and identifiability for co…
Anomaly detection in time-series via inductive biases in the latent space of conditional normalizing flows
Department of Computer Science Norwegian University of Science and Technology（挪威科学技术大学计算机科学系）；BCAM – Basque Center for Applied Mathematics University of Coimbra, CISUC/LASI, DEI（巴斯克应用数学中心，科英布拉大学，CISUC/LASI，DEI）；IKERBASQUE — Basque Foundation for Science（巴斯克科学基金会）
Consider a model parameterized by a scalar parameter of interest and a nuisance parameter vector. Inference about the parameter of interest may be based on the signed root of the likelihood ratio statistic R. The standard normal approximation to the conditional distribution of R typically has error of order O(n^{-1/2}), where n is the sample size. There are several modifications for R, which reduce the order of error in the approximations. In this paper, we mainly investigate Barndorff-Nielsen's modified directed likelihood ratio statistic, Severini's empirical adjustment, and DiCiccio and Mar…
The spherically invariant random process (SIRP) clutter model is commonly used in scenarios where the radar clutter cannot be correctly modeled as a Gaussian process. In this short communication, we devise a novel Maximum-Likelihood (ML)-based iterative estimator for direction-of-departure and direction-of-arrival estimation in the Multiple-input multiple-output (MIMO) radar context in the presence of SIRP clutter. The proposed estimator employs a stepwise numerical concentration approach w.r.t. the objective function related to the marginal likelihood of the observation data. Our estimator le…
We consider the Bayesian analysis of models in which the unknown distribution of the outcomes is specified up to a set of conditional moment restrictions. The nonparametric exponentially tilted empirical likelihood function is constructed to satisfy a sequence of unconditional moments based on an increasing (in sample size) vector of approximating functions (such as tensor splines based on the splines of each conditioning variable). For any given sample size, results are robust to the number of expanded moments. We derive Bernstein-von Mises theorems for the behavior of the posterior distribut…
Recent developments in statistical regression methodology shift away from pure mean regression towards distributional regression models. One important strand thereof is that of conditional transformation models (CTMs). CTMs infer the entire conditional distribution directly by applying a transformation function to the response conditionally on a set of covariates towards a simple log-concave reference distribution. Thereby, CTMs allow not only variance, kurtosis or skewness but the complete conditional distribution to depend on the explanatory variables. We propose a Bayesian notion of conditi…
Like mean, quantile and variance, mode is also an important measure of central tendency and data summary. Many practical questions often focus on "Which element (gene or file or signal) occurs most often or is the most typical among all elements in a network?". In such cases mode regression provides a convenient summary of how the regressors affect the conditional mode and is totally different from other regression models based on conditional mean or conditional quantile or conditional variance. Some inference methods have been used for mode regression but none of them from the Bayesian perspe…
DeepC4: Deep Conditional Census-Constrained Clustering for Large-scale Multitask Spatial Disaggregation of Urban Morphology
Department of Architecture, University of Cambridge（剑桥大学建筑系）；Cambridge University Centre for Risk in the Built Environment（剑桥大学建筑环境风险研究中心）；Earth Observation Center, German Aerospace Center（德国航天中心地球观测中心）；Institute of Geography, University of Bonn（波恩大学地理研究所）
There has been much recent interest in modifying Bayesian inference for misspecified models so that it is useful for specific purposes. One popular modified Bayesian inference method is "cutting feedback" which can be used when the model consists of a number of coupled modules, with only some of the modules being misspecified. Cutting feedback methods represent the full posterior distribution in terms of conditional and sequential components, and then modify some terms in such a representation based on the modular structure for specification or computation of a modified posterior distribution.…
We introduce a simple modification to the standard maximum likelihood estimation (MLE) framework. Rather than maximizing a single unconditional likelihood of the data under the model, we maximize a family of \textit{noise conditional} likelihoods consisting of the data perturbed by a continuum of noise levels. We find that models trained this way are more robust to noise, obtain higher test likelihoods, and generate higher quality images. They can also be sampled from via a novel score-based sampling scheme which combats the classical \textit{covariate shift} problem that occurs during sample …
National Tsing Hua University（国立清华大学）；Mediatek Inc.（联发科股份有限公司）
Many existing conditional score-based data generation methods utilize Bayes' theorem to decompose the gradients of a log posterior density into a mixture of scores. These methods facilitate the training procedure of conditional score models, as a mixture of scores can be separately estimated using a score model and a classifier. However, our analysis indicates that the training objectives for the classifier in these methods may lead to a serious score mismatch issue, which corresponds to the situation that the estimated scores deviate from the true ones. Such an issue causes the samples to be …
Xi'an Jiaotong University（西安交通大学）；Shanghai University of Finance and Economics（上海财经大学）；Fourth Military Medical University（第四军医大学）；Air Force Medical University（空军军医大学）；Xijing Hospital（西京医院）
Major depressive disorder (MDD) requires study of brain functional connectivity alterations for patients, which can be uncovered by resting-state functional magnetic resonance imaging (rs-fMRI) data. We consider the problem of identifying alterations of brain functional connectivity for a single MDD patient. This is particularly difficult since the amount of data collected during an fMRI scan is too limited to provide sufficient information for individual analysis. Additionally, rs-fMRI data usually has the characteristics of incompleteness, sparsity, variability, high dimensionality and high …
Traditional structured prediction models try to learn the conditional likelihood, i.e., p(y|x), to capture the relationship between the structured output y and the input features x. For many models, computing the likelihood is intractable. These models are therefore hard to train, requiring the use of surrogate objectives or variational inference to approximate likelihood. In this paper, we propose conditional Glow (c-Glow), a conditional generative flow for structured output learning. C-Glow benefits from the ability of flow-based models to compute p(y|x) exactly and efficiently. Learning wit…
I describe a trick for training flow models using a prescribed rule as a surrogate for maximum likelihood. The utility of this trick is limited for non-conditional models, but an extension of the approach, applied to maximum likelihood of the joint probability distribution of data and conditioning information, can be used to train sophisticated \textit{conditional} flow models. Unlike previous approaches, this method is quite simple: it does not require explicit knowledge of the distribution of conditions, auxiliary networks or other specific architecture, or additional loss terms beyond maxim…
The most widely used technology to identify the proteins present in a complex biological sample is tandem mass spectrometry, which quickly produces a large collection of spectra representative of the peptides (i.e., protein subsequences) present in the original sample. In this work, we greatly expand the parameter learning capabilities of a dynamic Bayesian network (DBN) peptide-scoring algorithm, Didea, by deriving emission distributions for which its conditional log-likelihood scoring function remains concave. We show that this class of emission distributions, called Convex Virtual Emissions…
University of Toronto（多伦多大学）；Vector Institute（向量研究所）
We formulate a new class of conditional generative models based on probability flows. Trained with maximum likelihood, it provides efficient inference and sampling from class-conditionals or the joint distribution, and does not require a priori knowledge of the number of classes or the relationships between classes. This allows one to train generative models from multiple, heterogeneous datasets, while retaining strong prior models over subsets of the data (e.g., from a single dataset, class label, or attribute). In this paper, in addition to end-to-end learning, we show how one can learn a si…
University of North Carolina at Chapel Hill（北卡罗来纳大学教堂山分校）；North Carolina State University（北卡罗来纳州立大学）
Understanding the dependencies among features of a dataset is at the core of most unsupervised learning tasks. However, a majority of generative modeling approaches are focused solely on the joint distribution $p(x)$ and utilize models where it is intractable to obtain the conditional distribution of some arbitrary subset of features $x_u$ given the rest of the observed covariates $x_o$: $p(x_u \mid x_o)$. Traditional conditional approaches provide a model for a fixed set of covariates conditioned on another fixed set of observed covariates. Instead, in this work we develop a model that is cap…
Vector Institute（向量研究所）；University of Toronto（多伦多大学）
Class-conditional generative models hold promise to overcome the shortcomings of their discriminative counterparts. They are a natural choice to solve discriminative tasks in a robust manner as they jointly optimize for predictive performance and accurate modeling of the input distribution. In this work, we investigate robust classification with likelihood-based generative models from a theoretical and practical perspective to investigate if they can deliver on their promises. Our analysis focuses on a spectrum of robustness properties: (1) Detection of worst-case outliers in the form of adver…
University of California, Berkeley（加州大学伯克利分校）；University of Toronto（多伦多大学）
Single-image super-resolution (SISR) is a canonical problem with diverse applications. Leading methods like SRGAN produce images that contain various artifacts, such as high-frequency noise, hallucinated colours and shape distortions, which adversely affect the realism of the result. In this paper, we propose an alternative approach based on an extension of the method of Implicit Maximum Likelihood Estimation (IMLE). We demonstrate greater effectiveness at noise reduction and preservation of the original colours and shapes, yielding more realistic super-resolved images.
MPI for Intelligent Systems（马克斯·普朗克智能系统研究所）；Probabilistic Learning Group（概率学习小组）
Probabilistic learning is increasingly being tackled as an optimization problem, with gradient-based approaches as predominant methods. When modelling multivariate likelihoods, a usual but undesirable outcome is that the learned model fits only a subset of the observed variables, overlooking the rest. In this work, we study this problem through the lens of multitask learning (MTL), where similar effects have been broadly studied. While MTL solutions do not directly apply in the probabilistic setting (as they cannot handle the likelihood constraints) we show that similar ideas may be leveraged …
ETH Zürich（苏黎世联邦理工学院）；University of Wisconsin, Madison（威斯康星大学麦迪逊分校）；Caltech（加州理工学院）
Fitting a graphical model to a collection of random variables given sample observations is a challenging task if the observed variables are influenced by latent variables, which can induce significant confounding statistical dependencies among the observed variables. We present a new convex relaxation framework based on regularized conditional likelihood for latent-variable graphical modeling in which the conditional distribution of the observed variables conditioned on the latent variables is given by an exponential family graphical model. In comparison to previously proposed tractable method…
Functional Generalized Empirical Likelihood Estimation for Conditional Moment Restrictions
Max Planck Institute for Intelligent Systems（马克斯·普朗克智能系统研究所）；Weierstrass Institute for Applied Analysis and Stochastics（魏尔斯特拉斯应用分析与随机过程研究所）；Eidgenössische Technische Hochschule Zürich（苏黎世联邦理工学院）
University of Connecticut（康涅狄格大学）；Iowa State University（爱荷华州立大学）
Subsampling is a computationally effective approach to extract information from massive data sets when computing resources are limited. After a subsample is taken from the full data, most available methods use an inverse probability weighted (IPW) objective function to estimate the model parameters. The IPW estimator does not fully utilize the information in the selected subsample. In this paper, we propose to use the maximum sampled conditional likelihood estimator (MSCLE) based on the sampled data. We established the asymptotic normality of the MSCLE and prove that its asymptotic variance co…
