Medical imaging is the technique used to create images of the human body or parts of it for clinical purposes. Medical images always have large sizes and they are commonly corrupted by single or multiple noise type at the same time, due to various reasons, these two reasons are the triggers for moving toward parallel image processing to find alternatives of image de-noising techniques. This paper presents a parallel hybrid filter implementation for gray scale medical image de-noising. The hybridization is between adaptive median and wiener filters. Parallelization is implemented on the adaptive median filter to overcome the latency of neighborhood operation, parfor implicit parallelism powered by MatLab 2013a is used. The implementation is tested on an image of 2.5 MB size, which is divided into 2, 4 and 8 partitions; a comparison between the proposed implementation and sequential implementation is given, in terms of time. Thus, each case has the best time when assigned to number of threads equal to the number of its partitions. Moreover, Speed up and efficiency are calculated for the algorithm and they show a measured enhancement.
Isfahan University of Technology（伊斯法罕理工大学）；University of Michigan（密歇根大学）；McMaster University（麦克马斯特大学）
Noise is an important factor that degrades the quality of medical images. Impulse noise is a common noise, which is caused by malfunctioning of sensor elements or errors in the transmission of images. In medical images due to presence of white foreground and black background, many pixels have intensities similar to impulse noise and distinction between noisy and regular pixels is difficult. In software techniques, the accuracy of the noise removal is more important than the algorithm's complexity. But for hardware implementation having a low complexity algorithm with an acceptable accuracy is …
Osaka Metropolitan University（大阪公立大学）；Smart Life Science Lab, Center for Health Science Innovation, Osaka Metropolitan University（大阪公立大学健康科学创新中心智能生命科学实验室）
The goal of our research is to create a comprehensive and flexible library that is easy to use for medical imaging research, and capable of handling grayscale images, multiple inputs (both images and tabular data), and multi-label tasks. We have named it Nervus. Based on the PyTorch library, which is suitable for AI for research purposes, we created a four-part model to handle comprehensive inputs and outputs. Nervus consists of four parts. First is the dataloader, then the feature extractor, the feature mixer, and finally the classifier. The dataloader preprocesses the input data, the feature…
QUIZ: An Arbitrary Volumetric Point Matching Method for Medical Image Registration
Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences（中国科学院深圳先进技术研究院）；University of Chinese Academy of Sciences（中国科学院大学）；Guangdong Medical University（广东医科大学）
The benefits of medical imaging are enormous. Medical images provide considerable amounts of anatomical information and this facilitates medical practitioners in performing effective disease diagnosis and deciding upon the best course of medical treatment. A transition from traditional monochromatic medical images like CT scans, X-Rays or MRI images to a colored 3D representation of the anatomical structure further enhances the capabilities of medical professionals in extracting valuable medical information. The proposed framework in our research starts with performing color transfer by findin…
Robust Rigid and Non-Rigid Medical Image Registration Using Learnable Edge Kernels
Department of Mathematics, University of Innsbruck（因斯布鲁克大学数学系）；Department of Radiology, Medical University of Innsbruck（因斯布鲁克医学大学放射学系）；Neuroimaging Research Core Facility, Medical University of Innsbruck（因斯布鲁克医学大学神经影像研究核心设施）
Northwood High School（诺斯伍德高中）；Irvine Unified School District（尔湾联合学区）；Fowler School of Engineering（福勒工程学院）；Chapman University（查普曼大学）
Deep generative networks in recent years have reinforced the need for caution while consuming various modalities of digital information. One avenue of deepfake creation is aligned with injection and removal of tumors from medical scans. Failure to detect medical deepfakes can lead to large setbacks on hospital resources or even loss of life. This paper attempts to address the detection of such attacks with a structured case study. Specifically, we evaluate eight different machine learning algorithms, which including three conventional machine learning methods, support vector machine, random fo…
University of Chinese Academy of Sciences（中国科学院大学）；Institute of Automation, Chinese Academy of Sciences（中国科学院自动化研究所）
Removing undesirable specular highlight from a single input image is of crucial importance to many computer vision and graphics tasks. Existing methods typically remove specular highlight for medical images and specific-object images, however, they cannot handle the images with text. In addition, the impact of specular highlight on text recognition is rarely studied by text detection and recognition community. Therefore, in this paper, we first raise and study the text-aware single image specular highlight removal problem. The core goal is to improve the accuracy of text detection and recognit…
Frangi Filters are one of the widely used filters for enhancing vessels in medical images. Since they were first proposed, the threshold of the vesselness function of Frangi Filters is to be arranged for each individual application. These thresholds are changed manually for individual fluoroscope, for enhancing coronary angiogram images. Hence it is felt, there is a need of mitigating the tuning procedure of threshold values for every fluoroscope. The current papers approach has been devised in order to treat the coronary angiogram images uniformly, irrespective of the fluoroscopes through whi…
University Medical Center Mannheim, Heidelberg University（海德堡大学曼海姆医学中心）
Poisson noise suppression is an important preprocessing step in several applications, such as medical imaging, microscopy, and astronomical imaging. In this work, we propose a novel patch-wise Poisson noise removal strategy, in which the MMSE estimator is utilized in order to produce the denoising result for each image patch. Fast and accurate computation of the MMSE estimator is carried out using k-d tree search followed by search in the K-nearest neighbor graph. Our experiments show that the proposed method is the preferable choice for low signal-to-noise ratios.
The University of Western Ontario（西安大略大学）；Lawson Health Research Institute（劳森健康研究所）
Direct methods have recently emerged as an effective and efficient tool in automated medical image analysis and become a trend to solve diverse challenging tasks in clinical practise. Compared to traditional methods, direct methods are of much more clinical significance by straightly targeting to the final clinical goal rather than relying on any intermediate steps. These intermediate steps, e.g., segmentation, registration and tracking, are actually not necessary and only limited to very constrained tasks far from being used in practical clinical applications; moreover they are computationall…
Technion - Israel Institute of Technology（以色列理工学院）
A new Combinatorial Ricci curvature and Laplacian operators for grayscale images are introduced and tested on 2D synthetic, natural and medical images. Analogue formulae for voxels are also obtained. These notions are based upon more general concepts developed by R. Forman. Further applications, in particular a fitting Ricci flow, are discussed.
A study on the adequacy of common IQA measures for medical images
University of Cambridge（剑桥大学）；Medical University of Vienna（维也纳医科大学）；Cambridge University Hospitals（剑桥大学医院）；Cancer Research UK Cambridge Institute（英国癌症研究剑桥研究院）
Queensland University of Technology（昆士兰科技大学）；University of Jaen（哈恩大学）；The University of Queensland（昆士兰大学）；University of Sumer（苏美尔大学）；University of Baghdad（巴格达大学）；The University of Information Technology & Communications（信息与通信技术大学）；University of Missouri（密苏里大学）
Deep Learning (DL) requires a large amount of training data to provide quality outcomes. However, the field of medical imaging suffers from the lack of sufficient data for properly training DL models because medical images require manual labelling carried out by clinical experts thus the process is time-consuming, expensive, and error-prone. Recently, transfer learning (TL) was introduced to reduce the need for the annotation procedure by means of transferring the knowledge performed by a previous task and then fine-tuning the result using a relatively small dataset. Nowadays, multiple classif…
Dublin City University（都柏林城市大学）；University College Dublin（都柏林大学学院）
Over the years, the paradigm of medical image analysis has shifted from manual expertise to automated systems, often using deep learning (DL) systems. The performance of deep learning algorithms is highly dependent on data quality. Particularly for the medical domain, it is an important aspect as medical data is very sensitive to quality and poor quality can lead to misdiagnosis. To improve the diagnostic performance, research has been done both in complex DL architectures and in improving data quality using dataset dependent static hyperparameters. However, the performance is still constraine…
University of Lübeck（吕贝克大学）；Imperial College London（帝国理工学院）
Deep convolutional neural networks (DCNN) are currently ubiquitous in medical imaging. While their versatility and high quality results for common image analysis tasks including segmentation, localisation and prediction is astonishing, the large representational power comes at the cost of highly demanding computational effort. This limits their practical applications for image guided interventions and diagnostic (point-of-care) support using mobile devices without graphics processing units (GPU). We propose a new scheme that approximates both trainable weights and neural activations in deep ne…
Oregon Health & Science University（俄勒冈健康与科学大学）；MGH/Harvard Medical School（麻省总医院/哈佛医学院）；MGH & BWH Center for Clinical Data Science（麻省总医院与布莱根妇女医院临床数据科学中心）；University of Lincoln（林肯大学）；University of Illinois at Chicago（伊利诺伊大学芝加哥分校）；National Eye Institute, National Institutes of Health（美国国立卫生研究院国家眼科研究所）
Background: Artificial intelligence (AI) may demonstrate racial bias when skin or choroidal pigmentation is present in medical images. Recent studies have shown that convolutional neural networks (CNNs) can predict race from images that were not previously thought to contain race-specific features. We evaluate whether grayscale retinal vessel maps (RVMs) of patients screened for retinopathy of prematurity (ROP) contain race-specific features. Methods: 4095 retinal fundus images (RFIs) were collected from 245 Black and White infants. A U-Net generated RVMs from RFIs, which were subsequently thr…
Helmholtz-Zentrum Dresden-Rossendorf（亥姆霍兹德累斯顿罗森多夫研究中心）；University Hospital Carl Gustav Carus（卡尔·古斯塔夫·卡鲁斯大学医院）
Multimodal medical image fusion helps in combining contrasting features from two or more input imaging modalities to represent fused information in a single image. One of the pivotal clinical applications of medical image fusion is the merging of anatomical and functional modalities for fast diagnosis of malignant tissues. In this paper, we present a novel end-to-end unsupervised learning-based Convolutional Neural Network (CNN) for fusing the high and low frequency components of MRI-PET grayscale image pairs, publicly available at ADNI, by exploiting Structural Similarity Index (SSIM) as the …
Unsupervised Multimodal 3D Medical Image Registration with Multilevel Correlation Balanced Optimization
College of Electrical and Information Engineering, Hunan University（湖南大学电气与信息工程学院）；National Engineering Research Center of Robot Visual Perception and Control Technology, Hunan University（湖南大学机器人视觉感知与控制技术国家工程研究中心）；Cornell University（康奈尔大学）
National Tsing Hua University（国立清华大学）；Florida International University（佛罗里达国际大学）；Lehigh University（理海大学）；Guangdong Provincial People’s Hospital（广东省人民医院）；Guangdong Academy of Medical Science（广东省医学科学院）；University of Notre Dame（圣母大学）
Deep learning had already demonstrated its power in medical images, including denoising, classification, segmentation, etc. All these applications are proposed to automatically analyze medical images beforehand, which brings more information to radiologists during clinical assessment for accuracy improvement. Recently, many medical denoising methods had shown their significant artifact reduction result and noise removal both quantitatively and qualitatively. However, those existing methods are developed around human-vision, i.e., they are designed to minimize the noise effect that can be perce…
De-Identification of Medical Imaging Data: A Comprehensive Tool for Ensuring Patient Privacy
Institute for AI in Medicine (IKIM)（人工智能医学研究所（IKIM））；University Hospital Essen（埃森大学医院）；Cancer Research Center Cologne Essen (CCCE)（科隆-埃森癌症研究中心（CCCE））；University Medicine Essen（埃森大学医学部）；German Cancer Consortium (DKTK)（德国癌症联盟（DKTK））；Technical University Dortmund（多特蒙德工业大学）
This study aims to evaluate PSDNet, a series of convolutional neural networks (ConvNets) trained with photographs to predict the particle size distribution of granular materials. Nine traditional feature extraction methods and 15 pretrained ConvNets were also evaluated and compared. A dataset including 9600 photographs of 15 different granular materials was used. The influence of image size and color band was verified by using six image sizes between 32 and 160 pixels, and both grayscale and color images as PSDNet inputs. In addition to random training, validation, and testing datasets, a mate…
From Redaction to Restoration: Deep Learning for Medical Image Anonymization and Reconstruction
Center for Artificial Intelligence, BCVI, Northwestern Medicine（西北医学BCVI人工智能中心）；Department of Electrical and Computer Engineering, Northwestern University（西北大学电气与计算机工程系）；Department of Surgery, Northwestern University（西北大学外科学系）；Xtasis Inc.（Xtasis公司）；Medtronic（美敦力公司）；Departments of Radiology and Clinical Neurosciences, University of Calgary（卡尔加里大学放射学与临床神经科学系）
Sharif University of Technology（谢里夫理工大学）；Tehran University of Medical Sciences（德黑兰医科大学）；Iran University of Medical Sciences（伊朗医科大学）
COVID-19 is a virus with high transmission rate that demands rapid identification of the infected patients to reduce the spread of the disease. The current gold-standard test, Reverse-Transcription Polymerase Chain Reaction (RT-PCR), has a high rate of false negatives. Diagnosing from CT-scan images as a more accurate alternative has the challenge of distinguishing COVID-19 from other pneumonia diseases. Artificial intelligence can help radiologists and physicians to accelerate the process of diagnosis, increase its accuracy, and measure the severity of the disease. We designed a new interpret…
Linear Attention Based Deep Nonlocal Means Filtering for Multiplicative Noise Removal
Research Institute of Electronic Science and Technology, University of Electronic Science and Technology of China（电子科技大学电子科学技术研究院）；School of Information and Communication Engineering, University of Electronic Science and Technology of China（电子科技大学信息与通信工程学院）
Brain tumors are masses or abnormal growths of cells within the brain or the central spinal canal with symptoms such as headaches, seizures, weakness or numbness in the arms or legs, changes in personality or behaviour, nausea, vomiting, vision or hearing problems and dizziness. Conventional diagnosis of brain tumour involves some tests and procedure which may include the consideration of medical history, physical examination, imaging tests (such as CT or MRI scans), and biopsy (removal and examination of a small piece of the tumor tissue). These procedures, while effective, are mentally stren…
The Wasserstein metric or earth mover's distance (EMD) is a useful tool in statistics, machine learning and computer science with many applications to biological or medical imaging, among others. Especially in the light of increasingly complex data, the computation of these distances via optimal transport is often the limiting factor. Inspired by this challenge, a variety of new approaches to optimal transport has been proposed in recent years and along with these new methods comes the need for a meaningful comparison. In this paper, we introduce a benchmark for discrete optimal transport, cal…
Exploiting Test-Time Augmentation in Federated Learning for Brain Tumor MRI Classification
Institute of Exact and Technological Sciences, Federal University of Viçosa - UFV, Rio Paranaíba-MG, Brazil（精确与技术科学研究所，弗拉维亚联邦大学-UFV，里奥帕拉纳伊巴-MG，巴西）；Department of Computing, Federal University of São Carlos, São Carlos-SP, Brazil（计算系，萨o卡洛斯联邦大学，萨o卡洛斯-SP，巴西）
SAM-aware Test-time Adaptation for Universal Medical Image Segmentation
Department of Data Science & AI, Faculty of Information Technology, Monash University（数据科学与人工智能系，信息科技学院，莫纳什大学）；Department of Computing and Department of Brain Sciences, Imperial College London（计算系和脑科学系，伦敦帝国学院）；Mohamed bin Zayed University of Artificial Intelligence（莫卧儿·本·扎耶德人工智能大学）；Department of Radiation Oncology, UT Southwestern Medical Center（放射肿瘤科，德克萨斯西南医学中心）
Synomaly Noise and Multi-Stage Diffusion: A Novel Approach for Unsupervised Anomaly Detection in Medical Images
Computer Aided Medical Procedures, Technical University of Munich, Munich, Germany（技术大学慕尼黑计算机辅助医疗程序）；Munich Center of Machine Learning, Munich, Germany（慕尼黑机器学习中心）；Department for Vascular and Endovascular Surgery, rechts der Isar University Hospital, Technical University of Munich, Munich, Germany（技术大学慕尼黑血管和内血管外科部门）
Near-infrared imaging has been considered as a solution to provide high quality photographs in dim lighting conditions. This imaging system captures two types of multimodal images: one is near-infrared gray image (NGI) and the other is the visible color image (VCI). NGI is noise-free but it is grayscale, whereas the VCI has colors but it contains noise. Moreover, there exist serious edge and brightness discrepancies between NGI and VCI. To deal with this problem, a new transfer-based fusion method is proposed for noise removal. Different from conventional fusion approaches, the proposed method…
Department of Electrical and Computer Engineering, Sungkyunkwan University, Suwon, Korea（延世大学电气与计算机工程系）；Department of Radiology and Center for Imaging Science, Samsung Medical Center, Sungkyunkwan University School of Medicine, Suwon, Korea（延世大学医学院放射科与成像科学中心）
