Accurate prediction of a gas solubility in a liquid is crucial in many areas of chemistry, and a detailed understanding of the molecular mechanism of the gas solvation continues to be an active area of research. Here, we extend the idea of constant chemical potential molecular dynamics (CμMD) approach to the calculation of the gas solubility in the liquid under constant gas chemical potential conditions. As a representative example, we utilize this method to calculate the isothermal solubility of carbon dioxide in water. Additionally, we provide microscopic insight into the mechanism of solvation that preferentially occurs in areas of the surface where the hydrogen network is broken.
A new dynamic line, the Frenkel line, has recently been proposed to separate the supercritical state into rigid-liquid and non-rigid gas-like uid. The location of Frenkel line on the phase diagram is unknown for real uids. Here, we map the Frenkel line for three important systems: CO2, H2O and CH4. This provides an important demarcation on the phase diagram of these systems, the demarcation that separates two distinct physical states with liquid-like and gas-like properties. We find that the Frenkel line can have similar trend as the melting line above the critical pressure. Moreover, we discu…
Although aqueous electrolytes are among the most important solutions, the molecular simulation of their intertwined properties of chemical potentials, solubility and activity coefficients has remained a challenging problem, and has attracted considerable recent interest. In this perspectives review, we focus on the simplest case of aqueous sodium chloride at ambient conditions and discuss the two main factors that have impeded progress. The first is lack of consensus with respect to the appropriate methodology for force field (FF) development. We examine how most commonly used FFs have been de…
We have studied the pressure and temperature dependence of solubility of nitrogen in methane and ethane using vapor-liquid equilibrium simulations of binary mixtures of nitrogen in methane and ethane for a range of pressures between 1.5 atm and 3.5 atm and temperatures between 90 K and 110 K, thermodynamic conditions that may exist on the Saturn's moon, Titan. We find that the solubility of nitrogen in methane increases linearly with pressure while the solubility of nitrogen in ethane increases exponentially with pressure at temperature 90 K. Solubility of nitrogen in both methane and ethane e…
We have determined the temperature dependence of the solvation behavior of a large collection of light gases in imidazolium-based Ionic Liquids (ILs) with the help of extensive molecular dynamics simulations. The solubility of molecular hydrogen, oxygen, nitrogen, methane, krypton, argon, neon and carbon dioxide in the imidazolium based ILs of type 1-n-alkyl-3-methylimidazolium bis(trifluoromethylsulfonyl)imide ([C$_n$mim][NTf$_2$]) with varying chain lengths $n\!=\!2,4,6,8$ are computed for a temperature range between $300\,\mbox{K}$ and $500\,\mbox{K}$ at $1\,\mbox{bar}$. By applying Widom's…
Despite its relevance in numerous natural and industrial processes, the solubility of molecular oxygen has never been directly measured in capillary condensed liquid water. In this article, we measure oxygen solubility in liquid water trapped within nanoporous samples, in metastable equilibrium with a subsaturated vapor. We show that solubility increases two-fold at moderate subsaturations (RH ~ 0.55). This evolution with relative humidity is in good agreement with a simple thermodynamic prediction using properties of bulk water, previously verified experimentally at positive pressure. Our mea…
We have studied the temperature dependence of the solubility of nitrogen in methane, ethane, and mixtures of methane and ethane using vapor-liquid equilibrium simulations of binary and ternary mixtures of nitrogen, methane and ethane for a range of temperatures between 90K and 110K at a pressure of 1.5 atm, thermodynamic conditions that may exist on the Saturn's giant moon, Titan. We find that --(i) the solubility of nitrogen in both methane and ethane decreases with increasing temperature; (ii) the solubility of nitrogen in methane is much larger compared to that in ethane at low temperatures…
We introduce a novel mesoscopic computational model based on a multiphase-multicomponent lattice Boltzmann method for the simulation of self-phoretic particles in the presence of liquid-liquid interfaces. Our model features fully resolved solvent hydrodynamics and, thanks to its versatility, it can handle important aspects of the multiphysics of the problem, including particle wettability and differential solubility of the product in the two liquid phases. The method is extensively validated in simple numerical experiments, whose outcome is theoretically predictable, and then applied to the st…
In this paper we investigate the solubility of a hard - sphere gas in a solvent modeled as an associating lattice gas (ALG). The solution phase diagram for solute at 5% is compared with the phase diagram of the original solute free model. Model properties are investigated thr ough Monte Carlo simulations and a cluster approximation. The model solubility is computed via simulations and shown to exhibit a minimum as a function of temperature. The line of minimum solubility (TmS) coincides with the line of maximum density (TMD) for different solvent chemical potentials.
Molecular dynamics simulations of miscible and partially miscible binary Lennard--Jones mixtures are used to study the dynamics and thermodynamics of vapor condensation onto a non-volatile liquid drop in the canonical ensemble. When the system volume is large, the driving force for condensation is low and only a submonolayer of the solvent is adsorbed onto the liquid drop. A small degree of mixing of the solvent phase into the core of the particles occurs for the miscible system. At smaller volumes complete film formation is observed and the dynamics of film growth are dominated by cluster-clu…
Dense protein clusters are known to play an important role in nucleation of protein crystals from dilute solutions. While these have generally been thought to be formed from a metastable phase, the observation of similar, if not identical, clusters above the critical point for the dilute-solution/strong-solution phase transition has thrown this into doubt. Furthermore, the observed clusters are stable for relatively long times. Because protein aggregation plays an important role in some pathologies, understanding the nature of such clusters is an important problem. One mechanism for the stabil…
Ton Duc Thang University（东德克萨斯大学）；Duy Tan University（越南岘港大学）；Petroleum University of Technology (PUT)（石油技术大学）；Amirkabir University of Technology（阿米尔卡比尔理工大学）；Obuda University（欧布达大学）；Oxford Brookes University（牛津布鲁克斯大学）；Bauhaus Universität-Weimar（魏玛包豪斯大学）；J. Selye University（塞耶大学）
Industry uses various solvents in the processes of refrigeration and ventilation. Among them, the Ionic liquids (ILs) as the relatively new solvents, are known for their proven eco-friendly characteristics. In this research, a comprehensive literature review was carried out to deliver an insight into the ILs and the prediction models used for estimating the ammonia solubility in ILs. Furthermore, a number of advanced machine learning methods, i.e. multilayer perceptron (MLP) and a combination of particle swarm optimization (PSO) and adaptive neuro-fuzzy inference system (ANFIS) models are used…
We study non-isothermal diffusive transport of a weakly-soluble two-component substance in a liquid-saturated porous medium being in contact with the reservoir of this substance. Particular attention is given to the example case of infiltration of nitrogen and oxygen from the atmosphere under the annual temperature oscillation. The surface temperature of the porous medium half-space oscillates in time, which results in a decaying solubility wave propagating deep into the porous medium. In such a system, the zones of saturated solution and nondissolved phase coexist with the zones of undersatur…
The collective motion of chemically active particles at an air-liquid interface is studied theoretically as a dynamic self-organization problem. Based on a physical consideration, we propose a minimal model for self-propelled particles by combining hydrodynamic interaction, capillary interaction, driving force by Marangoni effect, and Marangoni flow. Our model has successfully captured the features of chemically active particles, that represent dynamic self-organized states such as crystalline, chain, liquid-like and spreading states.
Chemically patterned surfaces are of significant interest in the context of microfluidic applications. Miniaturization of such devices will eventually lead to structures on the nano-scale. Whereas on the micron scale purely macroscopic descriptions of liquid flow are valid, on the nanometer scale long-ranged inter-molecular interactions, thermal fluctuations such as capillary waves, and finally the molecular structure of the liquid become important. We discuss the most important conceptual differences between flow on chemically patterned substrates on the micron scale and on the nanometer scal…
We report results of molecular dynamics simulations characterizing the solvation and interaction of small apolar particles such as methane and Xenon in imidazolium-based ionic liquids (ILs). The simulations are able to reproduce semi-quantitatively the anomalous temperature dependence of the solubility of apolar particles in the infinite dilution regime. We observe that the ``solvophobic solvation'' of small apolar particles in ILs is governed by compensating entropic and enthalpic contributions, very much like the hydrophobic hydration of small apolar particles in liquid water. In addition, o…
We analyze the stability of sessile filaments (ridges) of nonvolatile liquids versus pearling in the case of externally driven flow along a chemical stripe within the framework of the thin film approximation. The ridges can be stable with respect to pearling even if the contact line is not completely pinned. A generalized stability criterion for moving contact lines is provided. For large wavelengths and no drive, within perturbation theory, an analytical expression of the growth rate of pearling instabilities is derived. A numerical analysis shows that drive further stabilizes the ridge by re…
Chemical heterogeneity of solid surfaces disrupts the adsorption of surfactants from the bulk liquid. While its presence can hinder the performance of some formulations, bespoke chemical patterning could potentially facilitate controlled adsorption for nanolithography applications. Although some computational studies have investigated the impact of regularly patterned surfaces on surfactant adsorption, in reality many interesting surfaces are expected to be stochastically disordered and this is an area unexplored via simulations. In this paper we describe a new algorithm for the generation of …
Using a coarse-grained bead-spring model of flexible polymer chains, the structure of a polymeric nanodroplet adsorbed on a chemically decorated flat wall is investigated by means of Molecular Dynamics simulation. We consider sessile drops on a lyophilic (attractive for the monomers) region of circular shape with radius R_D while the remaining part of the substrate is lyophobic. The variation of the droplet shape, including its contact angle, with R_D is studied, and the density profiles across these droplets also are obtained. In addition, the interaction of droplets adsorbed on two walls for…
We study the time evolution and driven motion of thin liquid films lying on top of chemical patterns on a substrate. Lattice-Boltzmann and molecular dynamics methods are used for simulations of the flow of microscopic and nanoscopic films, respectively. Minimization of fluid surface area is used to examine the corresponding equilibrium free energy landscapes. The focus is on motion across patterns containing diverging and converging flow junctions, with an eye towards applications to lab-on-a-chip devices. Both open liquid-vapor systems driven by body forces and confined liquid-liquid systems …
Unlike fluids at thermal equilibrium, biomolecular mixtures in living systems can sustain nonequilibrium steady states, in which active processes modify the conformational states of the constituent molecules. Despite qualitative similarities between liquid--liquid phase separation in these systems, the extent to which the phase-separation kinetics differ remains unclear. Here we show that inhomogeneous chemical reactions can alter the nucleation kinetics of liquid--liquid phase separation in a manner that is consistent with classical nucleation theory, but can only be rationalized by introduci…
We compare the percolation loci for chemical clusters with the liquid-solid transition in the temperature-density phase diagram. Chemical clusters are defined as sets of particles connected through particle-particle bonds that last for a given time tau. By using molecular dynamics simulations of a Lennard-Jones system we obtain the percolation loci at different values of tau as the lines in the temperature-density plane at which the system presents a spanning cluster in 50 percent of the configurations. We find that the percolation loci for chemical clusters shifts rapidly towards high densiti…
Monte Carlo computer simulations are used to study transient cavities and the solvation of hard-spheroid solutes in dipolar hard sphere solvents. The probability distribution of spheroidal cavities in the solvent is shown to be well described by a Gaussian function, and the variations of fit parameters with cavity elongation and solvent properties are analyzed. The excess chemical potentials of hard-spheroid solutes with aspect ratios $x$ in the range $1/5 \leq x \leq 5$, and with volumes between one and twenty times that of a solvent molecule, are presented. It is shown that for a given molec…
Solubility of poorly soluble species in bulk and nanopores from grand-canonical Wang-Landau sampling
Institute for Computational Physics, University of Stuttgart（斯图加特大学计算物理研究所）；SC SimTech, Stuttgart Center for Simulation Science, University of Stuttgart（斯图加特大学斯图加特模拟科学中心）；Institute for Physics of Functional Materials, Hamburg University of Technology（汉堡工业大学功能材料物理研究所）
Phase separation of sequence-disordered liquid crystalline polymers, a promising class of technological and biological relevance, is studied by field theory, and thermodynamic mechanisms responsible for orientational ordering observed in experiments, are discussed. The theory developed predicts that chemical disorder marginally affects the nematic/isotropic biphasic coexistence width, but strongly impacts ordering; above a critical chemical disorder threshold orientational ordering is precluded.
Transferability of the chemical bond-based machine learning model for dipole moment: the GHz to THz dielectric properties of liquid propylene glycol and polypropylene glycol
For a distinguished water molecule, the solute water, we assess the contribution of each coordination state to its excess chemical potential, using a molecular aufbau approach. In this approach, we define a coordination sphere, the inner-shell, and separate the excess chemical potential into packing, outer-shell, and local chemical contributions; the coordination state is defined by the number of solvent water molecules within the coordination sphere. The packing term accounts for the free energy of creating a solute-free coordination sphere in the liquid. The outer-shell term accounts for the…
As approaching the glass transition, particle motion in liquids becomes highly heterogeneous and regions with virtually no mobility coexist with liquid-like domains. This complex dynamics is believed to be responsible for different phenomena including non-exponential relaxation and the breakdown of Stokes-Einstein relation. Understanding the relationships between dynamical heterogeneities and local structure in metallic liquids and glasses is a major scientific challenge. Here we use classical molecular dynamics simulations to study the atomic dynamics and microscopic structure of $\mbox{Cu}_{…
