Standard methods of using categorical variables as predictors either endow them with an ordinal structure or assume they have no structure at all. However, categorical variables often possess structure that is more complicated than a linear ordering can capture. We develop a mathematical framework for representing the structure of categorical variables and show how to generalize decision trees to make use of this structure. This approach is applicable to methods such as Gradient Boosted Trees which use a decision tree as the underlying learner. We show results on weather data to demonstrate the improvement yielded by this approach.
The overwhelming presence of categorical/sequential data in diverse domains emphasizes the importance of sequence mining. The challenging nature of sequences proves the need for continuing research to find a more accurate and faster approach providing a better understanding of their (dis)similarities. This paper proposes a new Model-based approach for clustering sequence data, namely nTreeClus. The proposed method deploys Tree-based Learners, k-mers, and autoregressive models for categorical time series, culminating with a novel numerical representation of the categorical sequences. Adopting t…
We revisit binary decision trees from the perspective of partitions of the data. We introduce the notion of partitioning function, and we relate it to the growth function and to the VC dimension. We consider three types of features: real-valued, categorical ordinal and categorical nominal, with different split rules for each. For each feature type, we upper bound the partitioning function of the class of decision stumps before extending the bounds to the class of general decision tree (of any fixed structure) using a recursive approach. Using these new results, we are able to find the exact VC…
With histograms as its foundation, we develop Categorical Exploratory Data Analysis (CEDA) under the extreme-$K$ sample problem, and illustrate its universal applicability through four 1D categorical datasets. Given a sizable $K$, CEDA's ultimate goal amounts to discover by data's information content via carrying out two data-driven computational tasks: 1) establish a tree geometry upon $K$ populations as a platform for discovering a wide spectrum of patterns among populations; 2) evaluate each geometric pattern's reliability. In CEDA developments, each population gives rise to a row vector of…
Personalized medicine aims at identifying best treatments for a patient with given characteristics. It has been shown in the literature that these methods can lead to great improvements in medicine compared to traditional methods prescribing the same treatment to all patients. Subgroup identification is a branch of personalized medicine which aims at finding subgroups of the patients with similar characteristics for which some of the investigated treatments have a better effect than the other treatments. A number of approaches based on decision trees has been proposed to identify such subgroup…
One advantage of decision tree based methods like random forests is their ability to natively handle categorical predictors without having to first transform them (e.g., by using feature engineering techniques). However, in this paper, we show how this capability can lead to an inherent "absent levels" problem for decision tree based methods that has never been thoroughly discussed, and whose consequences have never been carefully explored. This problem occurs whenever there is an indeterminacy over how to handle an observation that has reached a categorical split which was determined when the…
Gradient boosting methods based on Structured Categorical Decision Trees (SCDT) have been demonstrated to outperform numerical and one-hot-encodings on problems where the categorical variable has a known underlying structure. However, the enumeration procedure in the SCDT is infeasible except for categorical variables with low or moderate cardinality. We propose and implement two methods to overcome the computational obstacles and efficiently perform Gradient Boosting on complex structured categorical variables. The resulting package, called StructureBoost, is shown to outperform established p…
IBM Research（IBM研究院）；Lehigh University（理海大学）；Argonne National Laboratory（阿贡国家实验室）；Cornell University（康奈尔大学）
Decision trees have been a very popular class of predictive models for decades due to their interpretability and good performance on categorical features. However, they are not always robust and tend to overfit the data. Additionally, if allowed to grow large, they lose interpretability. In this paper, we present a mixed integer programming formulation to construct optimal decision trees of a prespecified size. We take the special structure of categorical features into account and allow combinatorial decisions (based on subsets of values of features) at each node. Our approach can also handle …
University of Liège（列日大学）；Aristotle University of Thessaloniki（塞萨洛尼基亚里士多德大学）；Katholieke Universiteit Leuven（鲁汶天主教大学）
Within machine learning, the supervised learning field aims at modeling the input-output relationship of a system, from past observations of its behavior. Decision trees characterize the input-output relationship through a series of nested $if-then-else$ questions, the testing nodes, leading to a set of predictions, the leaf nodes. Several of such trees are often combined together for state-of-the-art performance: random forest ensembles average the predictions of randomized decision trees trained independently in parallel, while tree boosting ensembles train decision trees sequentially to ref…
We propose a tree regularization framework, which enables many tree models to perform feature selection efficiently. The key idea of the regularization framework is to penalize selecting a new feature for splitting when its gain (e.g. information gain) is similar to the features used in previous splits. The regularization framework is applied on random forest and boosted trees here, and can be easily applied to other tree models. Experimental studies show that the regularized trees can select high-quality feature subsets with regard to both strong and weak classifiers. Because tree models can …
Universitat de València（瓦伦西亚大学）；Università degli Studi di Genova（热那亚大学）；IE University（IE大学）
Bayesian networks are a widely-used class of probabilistic graphical models capable of representing symmetric conditional independence between variables of interest using the topology of the underlying graph. For categorical variables, they can be seen as a special case of the much more general class of models called staged trees, which can represent any type of non-symmetric conditional independence. Here we formalize the relationship between these two models and introduce a minimal Bayesian network representation of the staged tree, which can be used to read conditional independences in an i…
Recursive partitioning approaches producing tree-like models are a long standing staple of predictive modeling, in the last decade mostly as ``sub-learners'' within state of the art ensemble methods like Boosting and Random Forest. However, a fundamental flaw in the partitioning (or splitting) rule of commonly used tree building methods precludes them from treating different types of variables equally. This most clearly manifests in these methods' inability to properly utilize categorical variables with a large number of categories, which are ubiquitous in the new age of big data. Such variabl…
The Johns Hopkins Applied Physics Laboratory（约翰斯·霍普金斯应用物理实验室）
The problem of categorical data analysis in high dimensions is considered. A discussion of the fundamental difficulties of probability modeling is provided, and a solution to the derivation of high dimensional probability distributions based on Bayesian learning of clique tree decomposition is presented. The main contributions of this paper are an automated determination of the optimal clique tree structure for probability modeling, the resulting derived probability distribution, and a corresponding unified approach to clustering and anomaly detection based on the probability distribution.
Decision forest algorithms typically model data by learning a binary tree structure recursively where every node splits the feature space into two sub-regions, sending examples into the left or right branch as a result. In axis-aligned decision forests, the "decision" to route an input example is the result of the evaluation of a condition on a single dimension in the feature space. Such conditions are learned using efficient, often greedy algorithms that optimize a local loss function. For example, a node's condition may be a threshold function applied to a numerical feature, and its paramete…
In this paper, we present a novel sequential paradigm for classification in crowdsourcing systems. Considering that workers are unreliable and they perform the tests with errors, we study the construction of decision trees so as to minimize the probability of mis-classification. By exploiting the connection between probability of mis-classification and entropy at each level of the decision tree, we propose two algorithms for decision tree design. Furthermore, the worker assignment problem is studied when workers can be assigned to different tests of the decision tree to provide a trade-off bet…
We discuss an autoencoder model in which the encoding and decoding functions are implemented by decision trees. We use the soft decision tree where internal nodes realize soft multivariate splits given by a gating function and the overall output is the average of all leaves weighted by the gating values on their path. The encoder tree takes the input and generates a lower dimensional representation in the leaves and the decoder tree takes this and reconstructs the original input. Exploiting the continuity of the trees, autoencoder trees are trained with stochastic gradient descent. On handwrit…
