We prove the consistency of the $\ell_1$ penalized negative binomial regression (NBR). A real data application about German health care demand shows that the $\ell_1$ penalized NBR produces a more concise but more accurate model, comparing to the classical NBR.
We consider the segmentation problem of Poisson and negative binomial (i.e. overdispersed Poisson) rate distributions. In segmentation, an important issue remains the choice of the number of segments. To this end, we propose a penalized log-likelihood estimator where the penalty function is constructed in a non-asymptotic context following the works of L. Birgé and P. Massart. The resulting estimator is proved to satisfy an oracle inequality. The performances of our criterion is assessed using simulated and real datasets in the RNA-seq data analysis context.
Penalization of the likelihood by Jeffreys' invariant prior, or by a positive power thereof, is shown to produce finite-valued maximum penalized likelihood estimates in a broad class of binomial generalized linear models. The class of models includes logistic regression, where the Jeffreys-prior penalty is known additionally to reduce the asymptotic bias of the maximum likelihood estimator; and also models with other commonly used link functions such as probit and log-log. Shrinkage towards equiprobability across observations, relative to the maximum likelihood estimator, is established theore…
We proposed a new penalized method in this paper to solve sparse Poisson Regression problems. Being different from $\ell_1$ penalized log-likelihood estimation, our new method can be viewed as penalized weighted score function method. We show that under mild conditions, our estimator is $\ell_1$ consistent and the tuning parameter can be pre-specified, which shares the same good property of the square-root Lasso.
The logistic regression model is known to converge to a Poisson point process model if the binary response tends to infinitely imbalanced. In this paper, it is shown that this phenomenon is universal in a wide class of link functions on binomial regression. The proof relies on the extreme value theory. For the logit, probit and complementary log-log link functions, the intensity measure of the point process becomes an exponential family. For some other link functions, deformed exponential families appear. A penalized maximum likelihood estimator for the Poisson point process model is suggested…
When a series of (related) linear models has to be estimated it is often appropriate to combine the different data-sets to construct more efficient estimators. We use $\ell_1$-penalized estimators like the Lasso or the Adaptive Lasso which can simultaneously do parameter estimation and model selection. We show that for a time-course of high-dimensional linear models the convergence rates of the Lasso and of the Adaptive Lasso can be improved by combining the different time-points in a suitable way. Moreover, the Adaptive Lasso still enjoys oracle properties and consistent variable selection. T…
We consider the problem of regularized maximum likelihood estimation for the structure and parameters of a high-dimensional, sparse directed acyclic graphical (DAG) model with Gaussian distribution, or equivalently, of a Gaussian structural equation model. We show that the $\ell_0$-penalized maximum likelihood estimator of a DAG has about the same number of edges as the minimal-edge I-MAP (a DAG with minimal number of edges representing the distribution), and that it converges in Frobenius norm. We allow the number of nodes p to be much larger than sample size n but assume a sparsity condition…
This paper studies the non-asymptotic merits of the double $\ell_1$-regularized for heterogeneous overdispersed count data via negative binomial regressions. Under the restricted eigenvalue conditions, we prove the oracle inequalities for Lasso estimators of two partial regression coefficients for the first time, using concentration inequalities of empirical processes. Furthermore, derived from the oracle inequalities, the consistency and convergence rate for the estimators are the theoretical guarantees for further statistical inference. Finally, both simulations and a real data analysis demo…
This paper investigates tradeoffs among optimization errors, statistical rates of convergence and the effect of heavy-tailed errors for high-dimensional robust regression with nonconvex regularization. When the additive errors in linear models have only bounded second moment, we show that iteratively reweighted $\ell_1$-penalized adaptive Huber regression estimator satisfies exponential deviation bounds and oracle properties, including the oracle convergence rate and variable selection consistency, under a weak beta-min condition. Computationally, we need as many as $O(\log s + \log\log d)$ it…
We study the problem of estimating a $p$-dimensional $s$-sparse vector in a linear model with Gaussian design and additive noise. In the case where the labels are contaminated by at most $o$ adversarial outliers, we prove that the $\ell_1$-penalized Huber's $M$-estimator based on $n$ samples attains the optimal rate of convergence $(s/n)^{1/2} + (o/n)$, up to a logarithmic factor. For more general design matrices, our results highlight the importance of two properties: the transfer principle and the incoherence property. These properties with suitable constants are shown to yield the optimal r…
The $\ell_1$-penalized method, or the Lasso, has emerged as an important tool for the analysis of large data sets. Many important results have been obtained for the Lasso in linear regression which have led to a deeper understanding of high-dimensional statistical problems. In this article, we consider a class of weighted $\ell_1$-penalized estimators for convex loss functions of a general form, including the generalized linear models. We study the estimation, prediction, selection and sparsity properties of the weighted $\ell_1$-penalized estimator in sparse, high-dimensional settings where t…
We consider several families of binomial sum identities whose definition involves the absolute value function. In particular, we consider centered double sums of the form \[S_{α,β}(n) := \sum_{k,\;\ell}\binom{2n}{n+k}\binom{2n}{n+\ell} |k^α-\ell^α|^β,\] obtaining new results in the cases $α= 1, 2$. We show that there is a close connection between these double sums in the case $α=1$ and the single centered binomial sums considered by Tuenter.
Given i.i.d. observations of a random vector $X \in \mathbb{R}^p$, we study the problem of estimating both its covariance matrix $Σ^*$, and its inverse covariance or concentration matrix {$Θ^* = (Σ^*)^{-1}$.} We estimate $Θ^*$ by minimizing an $\ell_1$-penalized log-determinant Bregman divergence; in the multivariate Gaussian case, this approach corresponds to $\ell_1$-penalized maximum likelihood, and the structure of $Θ^*$ is specified by the graph of an associated Gaussian Markov random field. We analyze the performance of this estimator under high-dimensional scaling, in which the number o…
We consider a linear regression problem in a high dimensional setting where the number of covariates $p$ can be much larger than the sample size $n$. In such a situation, one often assumes sparsity of the regression vector, \textit i.e., the regression vector contains many zero components. We propose a Lasso-type estimator $\hatβ^{Quad}$ (where '$Quad$' stands for quadratic) which is based on two penalty terms. The first one is the $\ell_1$ norm of the regression coefficients used to exploit the sparsity of the regression as done by the Lasso estimator, whereas the second is a quadratic penalt…
A new method is proposed for variable screening, variable selection and prediction in linear regression problems where the number of predictors can be much larger than the number of observations. The method involves minimizing a penalized Euclidean distance, where the penalty is the geometric mean of the $\ell_1$ and $\ell_2$ norms of the regression coefficients. This particular formulation exhibits a grouping effect, which is useful for screening out predictors in higher or ultra-high dimensional problems. Also, an important result is a signal recovery theorem, which does not require an estim…
Penalized regression estimators are a popular tool for the analysis of sparse and high-dimensional data sets. However, penalized regression estimators defined using an unbounded loss function can be very sensitive to the presence of outlying observations, especially high leverage outliers. Moreover, it can be particularly challenging to detect outliers in high-dimensional data sets. Thus, robust estimators for sparse and high-dimensional linear regression models are in need. In this paper, we study the robust and asymptotic properties of MM-Bridge and adaptive MM-Bridge estimators: $\ell_q$-pe…
We consider median regression and, more generally, a possibly infinite collection of quantile regressions in high-dimensional sparse models. In these models the overall number of regressors $p$ is very large, possibly larger than the sample size $n$, but only $s$ of these regressors have non-zero impact on the conditional quantile of the response variable, where $s$ grows slower than $n$. We consider quantile regression penalized by the $\ell_1$-norm of coefficients ($\ell_1$-QR). First, we show that $\ell_1$-QR is consistent at the rate $\sqrt{s/n} \sqrt{\log p}$. The overall number of regres…
$\ell_1$-penalized quantile regression is widely used for analyzing high-dimensional data with heterogeneity. It is now recognized that the $\ell_1$-penalty introduces non-negligible estimation bias, while a proper use of concave regularization may lead to estimators with refined convergence rates and oracle properties as the signal strengthens. Although folded concave penalized $M$-estimation with strongly convex loss functions have been well studied, the extant literature on quantile regression is relatively silent. The main difficulty is that the quantile loss is piecewise linear: it is non…
We study a family of regularized score-based estimators for learning the structure of a directed acyclic graph (DAG) for a multivariate normal distribution from high-dimensional data with $p\gg n$. Our main results establish support recovery guarantees and deviation bounds for a family of penalized least-squares estimators under concave regularization without assuming prior knowledge of a variable ordering. These results apply to a variety of practical situations that allow for arbitrary nondegenerate covariance structures as well as many popular regularizers including the MCP, SCAD, $\ell_{0}…
We consider the compressed sensing problem, where the object $x_0 \in \bR^N$ is to be recovered from incomplete measurements $y = Ax_0 + z$; here the sensing matrix $A$ is an $n \times N$ random matrix with iid Gaussian entries and $n < N$. A popular method of sparsity-promoting reconstruction is $\ell^1$-penalized least-squares reconstruction (aka LASSO, Basis Pursuit). It is currently popular to consider the strict sparsity model, where the object $x_0$ is nonzero in only a small fraction of entries. In this paper, we instead consider the much more broadly applicable $\ell_p$-sparsity model,…
We study a sparse negative binomial regression (NBR) for count data by showing the non-asymptotic advantages of using the elastic-net estimator. Two types of oracle inequalities are derived for the NBR's elastic-net estimates by using the Compatibility Factor Condition and the Stabil Condition. The second type of oracle inequality is for the random design and can be extended to many $\ell_1 + \ell_2$ regularized M-estimations, with the corresponding empirical process having stochastic Lipschitz properties. We derive the concentration inequality for the suprema empirical processes for the weigh…
This paper studies oracle properties of $\ell_1$-penalized least squares in nonparametric regression setting with random design. We show that the penalized least squares estimator satisfies sparsity oracle inequalities, i.e., bounds in terms of the number of non-zero components of the oracle vector. The results are valid even when the dimension of the model is (much) larger than the sample size and the regression matrix is not positive definite. They can be applied to high-dimensional linear regression, to nonparametric adaptive regression estimation and to the problem of aggregation of arbitr…
This paper studies the statistical properties of the group Lasso estimator for high dimensional sparse quantile regression models where the number of explanatory variables (or the number of groups of explanatory variables) is possibly much larger than the sample size while the number of variables in "active" groups is sufficiently small. We establish a non-asymptotic bound on the $\ell_{2}$-estimation error of the estimator. This bound explains situations under which the group Lasso estimator is potentially superior/inferior to the $\ell_{1}$-penalized quantile regression estimator in terms of…
Penalized regression approaches are standard tools in quantitative genetics. It is known that the fit of an \emph{ordinary least squares} (OLS) regression is independent of certain transformations of the coding of the predictor variables, and that the standard mixed model \emph{ridge regression best linear unbiased prediction} (RRBLUP) is neither affected by translations of the variable coding, nor by global scaling. However, it has been reported that an extended version of this mixed model, which incorporates interactions by products of markers as additional predictor variables is affected by…
In the Gaussian sequence model $Y= θ_0 + \varepsilon$ in $\mathbb{R}^n$, we study the fundamental limit of approximating the signal $θ_0$ by a class $Θ(d,d_0,k)$ of (generalized) splines with free knots. Here $d$ is the degree of the spline, $d_0$ is the order of differentiability at each inner knot, and $k$ is the maximal number of pieces. We show that, given any integer $d\geq 0$ and $d_0\in\{-1,0,\ldots,d-1\}$, the minimax rate of estimation over $Θ(d,d_0,k)$ exhibits the following phase transition: \begin{equation*} \begin{aligned} \inf_{\widetildeθ}\sup_{θ\inΘ(d,d_0, k)}\mathbb{E}_θ\|\wid…
This paper proposes a theory for $\ell_1$-norm penalized high-dimensional $M$-estimators, with nonconvex risk and unrestricted domain. Under high-level conditions, the estimators are shown to attain the rate of convergence $s_0\sqrt{\log(nd)/n}$, where $s_0$ is the number of nonzero coefficients of the parameter of interest. Sufficient conditions for our main assumptions are then developed and finally used in several examples including robust linear regression, binary classification and nonlinear least squares.
Feature selection is a standard approach to understanding and modeling high-dimensional classification data, but the corresponding statistical methods hinge on tuning parameters that are difficult to calibrate. In particular, existing calibration schemes in the logistic regression framework lack any finite sample guarantees. In this paper, we introduce a novel calibration scheme for $\ell_1$-penalized logistic regression. It is based on simple tests along the tuning parameter path and is equipped with optimal guarantees for feature selection. It is also amenable to easy and efficient implement…
Supervised learning by extreme learning machines resp. neural networks with random weights is studied under a non-stationary spatial-temporal sampling design which especially addresses settings where an autonomous object moving in a non-stationary spatial environment collects and analyzes data. The stochastic model especially allows for spatial heterogeneity and weak dependence. As efficient and computationally cheap learning methods (unconstrained) least squares, ridge regression and $\ell_s$-penalized least squares (including the LASSO) are studied. Consistency and asymptotic normality of th…