Parameter-Transferred Wasserstein Generative Adversarial Network (PT-WGAN) for Low-Dose PET Image Denoising
Northeastern University（东北大学）；Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences（中国科学院深圳先进技术研究院）；Rensselaer Polytechnic Institute（伦斯勒理工学院）
Yu Gong, Hongming Shan, Yueyang Teng, Ning Tu, Ming Li, Guodong Liang, Ge Wang, Shanshan Wang
备注：
10 pages and 12 figures
发表信息：
IEEE Transactions on Radiation and Plasma Medical Sciences, 2021
Due to the widespread use of positron emission tomography (PET) in clinical practice, the potential risk of PET-associated radiation dose to patients needs to be minimized. However, with the reduction in the radiation dose, the resultant images may suffer from noise and artifacts that compromise diagnostic performance. In this paper, we propose a parameter-transferred Wasserstein generative adversarial network (PT-WGAN) for low-dose PET image denoising. The contributions of this paper are twofold: i) a PT-WGAN framework is designed to denoise low-dose PET images without compromising structural details, and ii) a task-specific initialization based on transfer learning is developed to train PT-WGAN using trainable parameters transferred from a pretrained model, which significantly improves the training efficiency of PT-WGAN. The experimental results on clinical data show that the proposed network can suppress image noise more effectively while preserving better image fidelity than recently published state-of-the-art methods. We make our code available at https://github.com/90n9-yu/PT-WGAN.
Zhejiang University（浙江大学）；Binjiang Institute of Zhejiang University（浙江大学滨江研究院）；Hangzhou Universal Medical Imaging Diagnostic Center（杭州全景医学影像诊断中心）
18F-fluorodeoxyglucose (18F-FDG) Positron Emission Tomography (PET) imaging usually needs a full-dose radioactive tracer to obtain satisfactory diagnostic results, which raises concerns about the potential health risks of radiation exposure, especially for pediatric patients. Reconstructing the low-dose PET (L-PET) images to the high-quality full-dose PET (F-PET) ones is an effective way that both reduces the radiation exposure and remains diagnostic accuracy. In this paper, we propose a resource-efficient deep learning framework for L-PET reconstruction and analysis, referred to as transGAN-S…
A major challenge in computed tomography (CT) is how to minimize patient radiation exposure without compromising image quality and diagnostic performance. The use of deep convolutional (Conv) neural networks for noise reduction in Low-Dose CT (LDCT) images has recently shown a great potential in this important application. In this paper, we present a highly efficient and effective neural network model for LDCT image noise reduction. Specifically, to capture local anatomical features we integrate Deep Convolutional Neural Networks (CNNs) and Skip connection layers for feature extraction. Also, …
Image2Points:A 3D Point-based Context Clusters GAN for High-Quality PET Image Reconstruction
School of Computer Science, Sichuan University（四川大学计算机学院）；School of Computer Science, Chengdu University of Information Technology（成都信息工程大学计算机学院）；School of Biomedical Engineering, ShanghaiTech University（上海科技大学生物医学工程学院）；Department of Research and Development, Shanghai United Imaging Intelligence Co., Ltd.（上海联影智能医疗科技有限公司研发部）
Two-Phase Multi-Dose-Level PET Image Reconstruction with Dose Level Awareness
School of Computer Science, Sichuan University（四川大学计算机学院）；School of Biomedical Engineering & State Key Laboratory of Advanced Medical Materials and Devices, ShanghaiTech University（上海科技大学生物医学工程学院 & 先进医学材料与器件国家重点实验室）；Shanghai United Imaging Intelligence Co., Ltd.（上海联影智能医疗科技有限公司）
MDAA-Diff: CT-Guided Multi-Dose Adaptive Attention Diffusion Model for PET Denoising
School of Biomedical Engineering, Southern Medical University（南方医科大学生物医学工程学院）；School of Biomedical Engineering, Shanghai Jiao Tong University（上海交通大学生物医学工程学院）；Nanfang PET Center, Nanfang Hospital Southern Medical University（南方医科大学南芳医院PET中心）
Gating is commonly used in PET imaging to reduce respiratory motion blurring and facilitate more sophisticated motion correction methods. In the applications of low dose PET, however, reducing injection dose causes increased noise and reduces signal-to-noise ratio (SNR), subsequently corrupting the motion estimation/correction steps, causing inferior image quality. To tackle these issues, we first propose a Siamese adversarial network (SAN) that can efficiently recover high dose gated image volume from low dose gated image volume. To ensure the appearance consistency between the recovered gate…
Indian Institute of Technology (IIT) Bombay（印度理工学院孟买分校）；IITB-Monash Research Academy（印度理工学院孟买分校-莫纳什研究学院）；Monash University（莫纳什大学）
Radiation exposure in positron emission tomography (PET) imaging limits its usage in the studies of radiation-sensitive populations, e.g., pregnant women, children, and adults that require longitudinal imaging. Reducing the PET radiotracer dose or acquisition time reduces photon counts, which can deteriorate image quality. Recent deep-neural-network (DNN) based methods for image-to-image translation enable the mapping of low-quality PET images (acquired using substantially reduced dose), coupled with the associated magnetic resonance imaging (MRI) images, to high-quality PET images. However, s…
End-to-end Triple-domain PET Enhancement: A Hybrid Denoising-and-reconstruction Framework for Reconstructing Standard-dose PET Images from Low-dose PET Sinograms
ShanghaiTech University（上海科技大学）；Shanghai United Imaging Intelligence Co., Ltd.（上海联影智能医疗科技有限公司）；Shanghai Clinical Research and Trial Center（上海临床研究与试验中心）；Shanghai Artificial Intelligence Laboratory（上海人工智能实验室）
提出端到端三域 TriPLET 框架，融合投影域去噪、小波域重建和图像域对抗评估，从低剂量 PET 正弦图恢复标准剂量图像，并取得最优相似度与信噪比。
Despite its tremendous value for the diagnosis, treatment monitoring and surveillance of children with cancer, whole body staging with positron emission tomography (PET) is time consuming and associated with considerable radiation exposure. 100x (1% of the standard clinical dosage) ultra-low-dose/ultra-fast whole-body PET reconstruction has the potential for cancer imaging with unprecedented speed and improved safety, but it cannot be achieved by the naive use of machine learning techniques. In this study, we utilize the global similarity between baseline and follow-up PET and magnetic resonan…
Self is the Best Learner: CT-free Ultra-Low-Dose PET Organ Segmentation via Collaborating Denoising and Segmentation Learning
School of Biomedical Engineering, Southern Medical University（生物医学工程学院，南方医科大学）；School of Biomedical Engineering, Shanghai Jiao Tong University（生物医学工程学院，上海交通大学）；Nanfang PET Center, Nanfang Hospital Southern Medical University（南芳PET中心，南方医科大学南芳医院）；Guangdong Provincial Key Laboratory of Medical Image Processing, Southern Medical University（广东省医学图像处理重点实验室，南方医科大学）；Guangdong Province Engineering Laboratory for Medical Imaging and Diagnostic Technology, Southern Medical University（广东省医学影像与诊断技术工程实验室，南方医科大学）；Pazhou Lab（琶洲实验室）
Cycle-Constrained Adversarial Denoising Convolutional Network for PET Image Denoising: Multi-Dimensional Validation on Large Datasets with Reader Study and Real Low-Dose Data
TriDo-Former: A Triple-Domain Transformer for Direct PET Reconstruction from Low-Dose Sinograms
School of Computer Science, Sichuan University（四川大学计算机学院）；School of Computer Science, Chengdu University of Information Technology（成都信息工程大学计算机学院）；School of Biomedical Engineering, ShanghaiTech University（上海科技大学生物医学工程学院）；Shanghai United Imaging Intelligence Co., Ltd.（上海联影智能医疗科技有限公司）
POUR-Net: A Population-Prior-Aided Over-Under-Representation Network for Low-Count PET Attenuation Map Generation
Yale University（耶鲁大学）；University of California Irvine（加利福尼亚大学尔湾分校）；Canon Medical Research USA Inc.（佳能医疗研究美国公司）；Siemens Medical Solutions Inc.（西门子医疗解决方案公司）
University of California Los Angeles（加利福尼亚大学洛杉矶分校）；Duke University Medical Center（杜克大学医学中心）
This paper develops a method of biologically guided deep learning for post-radiation FDG-PET image outcome prediction based on pre-radiation images and radiotherapy dose information. Based on the classic reaction-diffusion mechanism, a novel biological model was proposed using a partial differential equation that incorporates spatial radiation dose distribution as a patient-specific treatment information variable. A 7-layer encoder-decoder-based convolutional neural network (CNN) was designed and trained to learn the proposed biological model. As such, the model could generate post-radiation F…
2.5D Multi-view Averaging Diffusion Model for 3D Medical Image Translation: Application to Low-count PET Reconstruction with CT-less Attenuation Correction
Yale School of Medicine（耶鲁医学院）；University of California Irvine（加州大学欧文分校）；Yale University（耶鲁大学）
The University of Tennessee（田纳西大学）；Siemens Medical Solutions Inc.（西门子医疗解决方案公司）
Direct reconstruction of positron emission tomography (PET) data using deep neural networks is a growing field of research. Initial results are promising, but often the networks are complex, memory utilization inefficient, produce relatively small 2D image slices (e.g., 128x128), and low count rate reconstructions are of varying quality. This paper proposes FastPET, a novel direct reconstruction convolutional neural network that is architecturally simple, memory space efficient, works for non-trivial 3D image volumes and is capable of processing a wide spectrum of PET data including low-dose a…
Friedrich-Alexander Universität Erlangen-Nürnberg（埃尔朗根-纽伦堡弗里德里希-亚历山大大学）；Siemens Healthineers AG（西门子医疗集团）
The use of deep learning has successfully solved several problems in the field of medical imaging. Deep learning has been applied to the CT denoising problem successfully. However, the use of deep learning requires large amounts of data to train deep convolutional networks (CNNs). Moreover, due to large parameter count, such deep CNNs may cause unexpected results. In this study, we introduce a novel CT denoising framework, which has interpretable behaviour, and provides useful results with limited data. We employ bilateral filtering in both the projection and volume domains to remove noise. To…
Contrastive Diffusion Model with Auxiliary Guidance for Coarse-to-Fine PET Reconstruction
Sichuan University（四川大学）；University of Sydney（悉尼大学）；Chengdu University of Information Technology（成都信息工程大学）；ShanghaiTech University（上海科技大学）；Shanghai United Imaging Intelligence Co., Ltd.（上海联影智能科技有限公司）
针对低剂量 PET 重建中扩散模型采样慢、条件对应保持不足的问题，提出由 CPM 与 IRM 构成的由粗到细框架，并引入辅助引导和对比扩散策略，提升速度、重建质量及临床可靠性。
MCR-VQGAN: A Scalable and Cost-Effective Tau PET Synthesis Approach for Alzheimer's Disease Imaging
Department of Biomedical Engineering, Wake Forest University School of Medicine（生物医学工程系，威克森林大学医学院）；Department of Radiology, Wake Forest School of Medicine（放射学系，威克森林医学院）；Department of Radiology and Biomedical Imaging, Yale School of Medicine（放射学与生物医学成像系，耶鲁医学院）
Positron Emission Tomography (PET) is an important tool for studying Alzheimer's disease (AD). PET scans can be used as diagnostics tools, and to provide molecular characterization of patients with cognitive disorders. However, multiple tracers are needed to measure glucose metabolism (18F-FDG), synaptic vesicle protein (11C-UCB-J), and $β$-amyloid (11C-PiB). Administering multiple tracers to patient will lead to high radiation dose and cost. In addition, access to PET scans using new or less-available tracers with sophisticated production methods and short half-life isotopes may be very limit…
MCAD: Multi-modal Conditioned Adversarial Diffusion Model for High-Quality PET Image Reconstruction
School of Computer Science, Sichuan University（四川大学计算机学院）；The Hong Kong Polytechnic University（香港理工大学）；School of Computer Science, Chengdu University of Information Technology（成都信息工程大学计算机学院）
Multibranch Generative Models for Multichannel Imaging with an Application to PET/CT Synergistic Reconstruction
Univ. Brest, LaTIM, INSERM, UMR 1101（布雷斯特大学、LaTIM研究所、法国国家健康与医学研究院、UMR 1101联合研究单位）；Nuclear Medicine Department, Poitiers University Hospital（普瓦捷大学医院核医学科）
Manifold-Constrained PET Reconstruction with Learned Flow-Matching Priors
ZJU-UIUC Institute, Zhejiang University（浙江大学紫金港研究院）；College of Information Science and Electronic Engineering, Zhejiang University（浙江大学信息与电子工程学院）；College of Optical Science and Engineering, Zhejiang University（浙江大学光电科学与工程学院）；Vivo Mobile Communication Co., Ltd.（维沃移动通信有限公司）；College of Biomedical Engineering and Instrument Science, Zhejiang University（浙江大学生物医学工程与仪器科学学院）
Imam Abdulrahman Bin Faisal University（伊玛目阿卜杜勒拉赫曼·本·费萨尔大学）
To accurately quantify in vivo radiotracer uptake using Positron Emission Tomography (PET) is a challenging task due to low signal-to-noise ratio (SNR) and poor spatial resolution of PET camera along with the finite image sampling constraint. Furthermore, inter lesion variations of the SNR and contrast along with the variations in size of the lesion make the quantitation even more difficult. One of the ways to improve the quantitation is via post reconstruction filtering with Gaussian Filter (GF). Edge preserving Bilateral Filter (BF) and Nonlinear Diffusion Filter (NDF) are the alternatives t…
Patlak Parametric Image Estimation from Dynamic PET Using Diffusion Model Prior
J. Crayton Pruitt Family Department of Biomedical Engineering, University of Florida（J. Crayton Pruitt家族生物医学工程系，佛罗里达大学）；Department of Radiology, University of Florida（放射学系，佛罗里达大学）；Interdisciplinary Program in Bioengineering, Seoul National University（生物工程跨学科项目，首尔国立大学）；Department of Nuclear Medicine, Seoul National University College of Medicine（核医学系，首尔国立大学医学院）；Department of Radiology, University of California Davis Health（放射学系，加州大学戴维斯医学中心）
Quantitative accuracy and thus diagnostic precision in Emission Tomography is impaired by the inherent random characteristics of the data acquisition leading to statistical image noise. Edge preserving spatial variation regularized iterative image reconstruction approaches require case-specific control parameter adaptation for optimized contrast-vs-noise tradeoff. For MLEM reconstruction, we propose and evaluate iRDF which automatically adapts RDP edge preservation parameters according to local image noise and PET data characteristics. In order to distinguish between clustered noise spots and …
REACT-KD: Region-Aware Cross-modal Topological Knowledge Distillation for Interpretable Medical Image Classification
Department of Health Technology and Informatics, Hong Kong Polytechnic University（健康科技与信息技术系，香港理工大学）；Department of Nuclear Medicine and PET, Hong Kong Sanatorium and Hospital（核医学与PET部门，香港疗养院及医院）
The University of Tennessee（田纳西大学）；Siemens Medical Solutions USA Inc.（美国西门子医疗解决方案公司）
Purpose: Neural network image reconstruction directly from measurement data is a relatively new field of research, that until now has been limited to producing small single-slice images (e.g., 1x128x128). This paper proposes a novel and more efficient network design for Positron Emission Tomography called DirectPET which is capable of reconstructing multi-slice image volumes (i.e., 16x400x400) from sinograms. Approach: Large-scale direct neural network reconstruction is accomplished by addressing the associated memory space challenge through the introduction of a specially designed Radon inver…
Currently, MRI-only radiotherapy (RT) eliminates some of the concerns about using CT images in RT chains such as the registration of MR images to a separate CT, extra dose delivery, and the additional cost of repeated imaging. However, one remaining challenge is that the signal intensities of MRI are not related to the attenuation coefficient of the biological tissue. This work compares the performance of two state-of-the-art deep learning models; a generative adversarial network (GAN) and a residual network (ResNet) for synthetic CTs (sCT) generation from MR images. The brain MR and CT images…
Self-supervised physics-informed generative networks for phase retrieval from a single X-ray hologram
NSLS-II, Brookhaven National Laboratory（布鲁克海文国家实验室国家同步辐射光源II）；Institute of Materials Physics, Helmholtz-Zentrum Hereon（亥姆霍兹联合会Hereon材料物理研究所）；Center for X-ray and Nano Science CXNS, Deutsches Elektronen-Synchrotron DESY（德国电子同步加速器X射线与纳米科学中心）；Department of Physics, Universität Hamburg（汉堡大学物理系）；Helmholtz Imaging, Deutsches Elektronen-Synchrotron DESY（德国电子同步加速器亥姆霍兹成像）；Institute of Metallic Biomaterials, Helmholtz-Zentrum Hereon（亥姆霍兹联合会Hereon金属生物材料研究所）
