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arXiv 1902.07877cs.CV

Atrial Scar Quantification via Multi-scale CNN in the Graph-cuts Framework

School of Biomedical Engineering, Shanghai Jiao Tong University(上海交通大学生物医学工程学院);School of Data Science, Fudan University(复旦大学数据科学学院);Dept of Statistics, School of Management, Fudan University(复旦大学管理学院统计系);National Heart and Lung Institute, Imperial College London(帝国理工学院国家心肺研究所);Cardiovascular Research Center, Royal Brompton Hospital(皇家布朗普顿医院心血管研究中心);School of NAOCE, Shanghai Jiao Tong University(上海交通大学NAOCE学院)

Lei Li, Fuping Wu, Guang Yang, Lingchao Xu, Tom Wong, Raad Mohiaddin, David Firmin, Jennifer Keegan, Xiahai Zhuang

英文摘要:

Late gadolinium enhancement magnetic resonance imaging (LGE MRI) appears to be a promising alternative for scar assessment in patients with atrial fibrillation (AF). Automating the quantification and analysis of atrial scars can be challenging due to the low image quality. In this work, we propose a fully automated method based on the graph-cuts framework, where the potentials of the graph are learned on a surface mesh of the left atrium (LA) using a multi-scale convolutional neural network (MS-CNN). For validation, we have employed fifty-eight images with manual delineations. MS-CNN, which can efficiently incorporate both the local and global texture information of the images, has been shown to evidently improve the segmentation accuracy of the proposed graph-cuts based method. The segmentation could be further improved when the contribution between the t-link and n-link weights of the graph is balanced. The proposed method achieves a mean accuracy of 0.856 +- 0.033 and mean Dice score of 0.702 +- 0.071 for LA scar quantification. Compared with the conventional methods, which are based on the manual delineation of LA for initialization, our method is fully automatic and has demonstrated significantly better Dice score and accuracy (p < 0.01). The method is promising and can be useful in diagnosis and prognosis of AF.

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