Principal Model Analysis Based on Partial Least Squares
School of Economics and Management, Beijing University of Technology（北京工业大学经济与管理学院）；Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences（中国科学院生态环境研究中心）；Faculty of Mathematics and Statistics, Hubei University（湖北大学数学与统计学院）；Toyota Technological Institute（丰田工业大学）；Beijing Research Institute of Uranium Geology（北京铀矿地质研究所）
Qiwei Xie, Liang Tang, Weifu Li, Vijay John, Yong Hu
Motivated by the Bagging Partial Least Squares (PLS) and Principal Component Analysis (PCA) algorithms, we propose a Principal Model Analysis (PMA) method in this paper. In the proposed PMA algorithm, the PCA and the PLS are combined. In the method, multiple PLS models are trained on sub-training sets, derived from the original training set based on the random sampling with replacement method. The regression coefficients of all the sub-PLS models are fused in a joint regression coefficient matrix. The final projection direction is then estimated by performing the PCA on the joint regression coefficient matrix. The proposed PMA method is compared with other traditional dimension reduction methods, such as PLS, Bagging PLS, Linear discriminant analysis (LDA) and PLS-LDA. Experimental results on six public datasets show that our proposed method can achieve better classification performance and is usually more stable.
Principal component analysis (PCA) is often used to reduce the dimension of data by selecting a few orthonormal vectors that explain most of the variance structure of the data. L1 PCA uses the L1 norm to measure error, whereas the conventional PCA uses the L2 norm. For the L1 PCA problem minimizing the fitting error of the reconstructed data, we propose an exact reweighted and an approximate algorithm based on iteratively reweighted least squares. We provide convergence analyses, and compare their performance against benchmark algorithms in the literature. The computational experiment shows th…
Principal Component Analysis (PCA) is a very successful dimensionality reduction technique, widely used in predictive modeling. A key factor in its widespread use in this domain is the fact that the projection of a dataset onto its first $K$ principal components minimizes the sum of squared errors between the original data and the projected data over all possible rank $K$ projections. Thus, PCA provides optimal low-rank representations of data for least-squares linear regression under standard modeling assumptions. On the other hand, when the loss function for a prediction problem is not the l…
In the course of the last century, Principal Component Analysis (PCA) have become one of the pillars of modern scientific methods. Although PCA is normally addressed as a statistical tool aiming at finding orthogonal directions on which the variance is maximized, its first introduction by Pearson at 1901 was done through defining a non-linear least-squares minimization problem of fitting a plane to scattered data points. Thus, it seems natural that PCA and linear least-squares regression are somewhat related, as they both aim at fitting planes to data points. In this paper, we present a connec…
We propose a new sparse principal component analysis (SPCA) method in which the solutions are obtained by projecting the full cardinality principal components onto subsets of variables. The resulting components are guaranteed to explain a given proportion of variance. The computation of these solutions is very efficient. The proposed method compares well with the optimal least squares sparse components. We show that other SPCA methods fail to identify the best sparse approximations of the principal components and explain less variance than our solutions. We illustrate and compare our method wi…
A few iterations of alternating least squares with a random starting point provably suffice to produce nearly optimal spectral- and Frobenius-norm accuracies of low-rank approximations to a matrix; iterating to convergence is unnecessary. Thus, software implementing alternating least squares can be retrofitted via appropriate setting of parameters to calculate nearly optimally accurate low-rank approximations highly efficiently, with no need for convergence.
Sparse Principal Components Analysis aims to find principal components with few non-zero loadings. We derive such sparse solutions by adding a genuine sparsity requirement to the original Principal Components Analysis (PCA) objective function. This approach differs from others because it preserves PCA's original optimality: \uns\ of the components and Least Squares approximation of the data. To identify the best subset of non-zero loadings we propose a Branch-and-Bound search and an iterative elimination algorithm. This last algorithm finds sparse solutions with large loadings and can be run w…
We study a statistical model for the tensor principal component analysis problem introduced by Montanari and Richard: Given a order-$3$ tensor $T$ of the form $T = τ\cdot v_0^{\otimes 3} + A$, where $τ\geq 0$ is a signal-to-noise ratio, $v_0$ is a unit vector, and $A$ is a random noise tensor, the goal is to recover the planted vector $v_0$. For the case that $A$ has iid standard Gaussian entries, we give an efficient algorithm to recover $v_0$ whenever $τ\geq ω(n^{3/4} \log(n)^{1/4})$, and certify that the recovered vector is close to a maximum likelihood estimator, all with high probability …
University of Leicester（莱斯特大学）；Institut Curie（居里研究所）
In many physical, statistical, biological and other investigations it is desirable to approximate a system of points by objects of lower dimension and/or complexity. For this purpose, Karl Pearson invented principal component analysis in 1901 and found 'lines and planes of closest fit to system of points'. The famous k-means algorithm solves the approximation problem too, but by finite sets instead of lines and planes. This chapter gives a brief practical introduction into the methods of construction of general principal objects, i.e. objects embedded in the 'middle' of the multidimensional da…
We analyse the prediction error of principal component regression (PCR) and prove non-asymptotic upper bounds for the corresponding squared risk. Under mild assumptions, we show that PCR performs as well as the oracle method obtained by replacing empirical principal components by their population counterparts. Our approach relies on upper bounds for the excess risk of principal component analysis.
We compare the risk of ridge regression to a simple variant of ordinary least squares, in which one simply projects the data onto a finite dimensional subspace (as specified by a Principal Component Analysis) and then performs an ordinary (un-regularized) least squares regression in this subspace. This note shows that the risk of this ordinary least squares method is within a constant factor (namely 4) of the risk of ridge regression.
We consider the problem of how many components to retain in the application of principal component analysis when the dimension is much higher than the number of observations. To estimate the number of components, we propose to sequentially test skewness of the squared lengths of residual scores that are obtained by removing leading principal components. The residual lengths are asymptotically left-skewed if all principal components with diverging variances are removed, and right-skewed if not. The proposed estimator is shown to be consistent, performs well in high-dimensional simulation studie…
This work aims to give non-asymptotic results for estimating the first principal component of a multivariate random process. We first define the covariance function and the covariance operator in the multivariate case. We then define a projection operator. This operator can be seen as a reconstruction step from the raw data in the functional data analysis context. Next, we show that the eigenelements can be expressed as the solution to an optimization problem, and we introduce the LASSO variant of this optimization problem and the associated plugin estimator. Finally, we assess the estimator's…
The scalar-on-function regression model has become a popular analysis tool to explore the relationship between a scalar response and multiple functional predictors. Most of the existing approaches to estimate this model are based on the least-squares estimator, which can be seriously affected by outliers in empirical datasets. When outliers are present in the data, it is known that the least-squares-based estimates may not be reliable. This paper proposes a robust functional partial least squares method, allowing a robust estimate of the regression coefficients in a scalar-on-multiple-function…
There are often two important types of variation in functional data: the horizontal (or phase) variation and the vertical (or amplitude) variation. These two types of variation have been appropriately separated and modeled through a domain warping method (or curve registration) based on the Fisher Rao metric. This paper focuses on the analysis of the horizontal variation, captured by the domain warping functions. The square-root velocity function representation transforms the manifold of the warping functions to a Hilbert sphere. Motivated by recent results on manifold analogs of principal com…
We propose a new framework -- Square Root Principal Component Pursuit -- for low-rank matrix recovery from observations corrupted with noise and outliers. Inspired by the square root Lasso, this new formulation does not require prior knowledge of the noise level. We show that a single, universal choice of the regularization parameter suffices to achieve reconstruction error proportional to the (a priori unknown) noise level. In comparison, previous formulations such as stable PCP rely on noise-dependent parameters to achieve similar performance, and are therefore challenging to deploy in appli…
University of Colorado, Boulder（科罗拉多大学博尔德分校）；IBM T.J. Watson Research Center（IBM托马斯·J·沃森研究中心）
Randomized matrix compression techniques, such as the Johnson-Lindenstrauss transform, have emerged as an effective and practical way for solving large-scale problems efficiently. With a focus on computational efficiency, however, forsaking solutions quality and accuracy becomes the trade-off. In this paper, we investigate compressed least-squares problems and propose new models and algorithms that address the issue of error and noise introduced by compression. While maintaining computational efficiency, our models provide robust solutions that are more accurate--relative to solutions of uncom…
