We apply the network Lasso to solve binary classification and clustering problems for network-structured data. To this end, we generalize ordinary logistic regression to non-Euclidean data with an intrinsic network structure. The resulting "logistic network Lasso" amounts to solving a non-smooth convex regularized empirical risk minimization. The risk is measured using the logistic loss incurred over a small set of labeled nodes. For the regularization, we propose to use the total variation of the classifier requiring it to conform to the underlying network structure. A scalable implementation of the learning method is obtained using an inexact variant of the alternating direction methods of multipliers which results in a scalable learning algorithm
Department of Computer Science, Aalto University（阿尔托大学计算机科学系）；Aalto University（阿尔托大学）
We apply the network Lasso to classify partially labeled data points which are characterized by high-dimensional feature vectors. In order to learn an accurate classifier from limited amounts of labeled data, we borrow statistical strength, via an intrinsic network structure, across the dataset. The resulting logistic network Lasso amounts to a regularized empirical risk minimization problem using the total variation of a classifier as a regularizer. This minimization problem is a non-smooth convex optimization problem which we solve using a primal-dual splitting method. This method is appeali…
University of Science and Technology of China（中国科学技术大学）；Peking University（北京大学）；Central China Normal University（华中师范大学）
When we are interested in high-dimensional system and focus on classification performance, the $\ell_{1}$-penalized logistic regression is becoming important and popular. However, the Lasso estimates could be problematic when penalties of different coefficients are all the same and not related to the data. We proposed two types of weighted Lasso estimates depending on covariates by the McDiarmid inequality. Given sample size $n$ and dimension of covariates $p$, the finite sample behavior of our proposed methods with a diverging number of predictors is illustrated by non-asymptotic oracle inequ…
We consider the problem of estimating a function $f\_{0}$ in logistic regression model. We propose to estimate this function $f\_{0}$ by a sparse approximation build as a linear combination of elements of a given dictionary of $p$ functions. This sparse approximation is selected by the Lasso or Group Lasso procedure. In this context, we state non asymptotic oracle inequalities for Lasso and Group Lasso under restricted eigenvalues assumption as introduced in \cite{BRT}.
In this work, we consider a manufactory process which can be described by a multiple-instance logistic regression model. In order to compute the maximum likelihood estimation of the unknown coefficient, an expectation-maximization algorithm is proposed, and the proposed modeling approach can be extended to identify the important covariates by adding the coefficient penalty term into the likelihood function. In addition to essential technical details, we demonstrate the usefulness of the proposed method by simulations and real examples.
Penalized regression is an attractive framework for variable selection problems. Often, variables possess a grouping structure, and the relevant selection problem is that of selecting groups, not individual variables. The group lasso has been proposed as a way of extending the ideas of the lasso to the problem of group selection. Nonconvex penalties such as SCAD and MCP have been proposed and shown to have several advantages over the lasso; these penalties may also be extended to the group selection problem, giving rise to group SCAD and group MCP methods. Here, we describe algorithms for fitt…
The Ising model was originally developed to model magnetisation of solids in statistical physics. As a network of binary variables with the probability of becoming 'active' depending only on direct neighbours, the Ising model appears appropriate for many other processes. For instance, it was recently applied in psychology to model co-occurrences of mental disorders. It has been shown that the connections between the variables (nodes) in the Ising network can be estimated with a series of logistic regressions. This naturally leads to questions of how well such a model predicts new observations …
We apply network Lasso to semi-supervised regression problems involving network structured data. This approach lends quite naturally to highly scalable learning algorithms in the form of message passing over an empirical graph which represents the network structure of the data. By using a simple non-parametric regression model, which is motivated by a clustering hypothesis, we provide an analysis of the estimation error incurred by network Lasso. This analysis reveals conditions on the the network structure and the available training data which guarantee network Lasso to be accurate. Remarkabl…
Logistic lasso regression with nearest neighbors for gradient-based dimension reduction
University of Oslo（奥斯陆大学）；CREST, ENSAI, University of Rennes（法国国家经济统计与分析中心，雷恩高等应用统计学院，雷恩大学）；Univ Angers, CNRS, LAREMA, SFR MATHSTIC（昂热大学，法国国家科学研究中心，拉雷马实验室，数学科学联合研究服务）
This paper study sparse classification problems. We show that under single-index models, vanilla Lasso could give good estimate of unknown parameters. With this result, we see that even if the model is not linear, and even if the response is not continuous, we could still use vanilla Lasso to train classifiers. Simulations confirm that vanilla Lasso could be used to get a good estimation when data are generated from a logistic regression model.
Parkland Center for Clinical Innovation (PCCI)（帕克兰临床创新中心）；Parkland Community Health Plan (PCHP)（帕克兰社区健康计划）
Pediatric asthma is the most prevalent chronic childhood illness, afflicting about 6.2 million children in the United States. However, asthma could be better managed by identifying and avoiding triggers, educating about medications and proper disease management strategies. This research utilizes deep learning methodologies to predict asthma-related emergency department (ED) visit within 3 months using Medicaid claims data. We compare prediction results against traditional statistical classification model - penalized Lasso logistic regression, which we trained and have deployed since 2015. The …
The network Lasso is a recently proposed convex optimization method for machine learning from massive network structured datasets, i.e., big data over networks. It is a variant of the well-known least absolute shrinkage and selection operator (Lasso), which is underlying many methods in learning and signal processing involving sparse models. Highly scalable implementations of the network Lasso can be obtained by state-of-the art proximal methods, e.g., the alternating direction method of multipliers (ADMM). By generalizing the concept of the compatibility condition put forward by van de Geer a…
We propose networked exponential families to jointly leverage the information in the topology as well as the attributes (features) of networked data points. Networked exponential families are a flexible probabilistic model for heterogeneous datasets with intrinsic network structure. These models can be learnt efficiently using network Lasso which implicitly pools or clusters the data points according to the intrinsic network structure and the local likelihood. The resulting method can be formulated as a non-smooth convex optimization problem which we solve using a primal-dual splitting method.…
Stanford University（斯坦福大学）；University of California, Berkeley（加州大学伯克利分校）；Gematria Technologies（Gematria科技公司）
Much work has been done recently to make neural networks more interpretable, and one obvious approach is to arrange for the network to use only a subset of the available features. In linear models, Lasso (or $\ell_1$-regularized) regression assigns zero weights to the most irrelevant or redundant features, and is widely used in data science. However the Lasso only applies to linear models. Here we introduce LassoNet, a neural network framework with global feature selection. Our approach enforces a hierarchy: specifically a feature can participate in a hidden unit only if its linear representat…
Aalto University（阿尔托大学）；Sharif University of Technology（谢里夫理工大学）
We study the statistical and computational properties of a network Lasso method for local graph clustering. The clusters delivered by nLasso can be characterized elegantly via network flows between cluster boundary and seed nodes. While spectral clustering methods are guided by a minimization of the graph Laplacian quadratic form, nLasso minimizes the total variation of cluster indicator signals. As demonstrated theoretically and numerically, nLasso methods can handle very sparse clusters (chain-like) which are difficult for spectral clustering. We also verify that a primal-dual method for non…
Topic modeling is widely studied for the dimension reduction and analysis of documents. However, it is formulated as a difficult optimization problem. Current approximate solutions also suffer from inaccurate model- or data-assumptions. To deal with the above problems, we propose a polynomial-time deep topic model with no model and data assumptions. Specifically, we first apply multilayer bootstrap network (MBN), which is an unsupervised deep model, to reduce the dimension of documents, and then use the low-dimensional data representations or their clustering results as the target of supervise…
The University of Tokyo（东京大学）；Kyoto University（京都大学）
We theoretically analyze the model selection consistency of least absolute shrinkage and selection operator (Lasso), both with and without post-thresholding, for high-dimensional Ising models. For random regular (RR) graphs of size $p$ with regular node degree $d$ and uniform couplings $θ_0$, it is rigorously proved that Lasso \textit{without post-thresholding} is model selection consistent in the whole paramagnetic phase with the same order of sample complexity $n=Ω{(d^3\log{p})}$ as that of $\ell_1$-regularized logistic regression ($\ell_1$-LogR). This result is consistent with the conjectur…
In this work, we introduce a modified (rescaled) likelihood for imbalanced logistic regression. This new approach makes easier the use of exponential priors and the computation of lasso regularization path. Precisely, we study a limiting behavior for which class imbalance is artificially increased by replication of the majority class observations. If some strong overlap conditions are satisfied, the maximum likelihood estimate converges towards a finite value close to the initial one (intercept excluded) as shown by simulations with binary predictors. This solution corresponds to the extremum …
Tel Aviv University（特拉维夫大学）；The Open University of Israel（以色列开放大学）
In this paper we consider high-dimensional multiclass classification by sparse multinomial logistic regression. We propose first a feature selection procedure based on penalized maximum likelihood with a complexity penalty on the model size and derive the nonasymptotic bounds for misclassification excess risk of the resulting classifier. We establish also their tightness by deriving the corresponding minimax lower bounds. In particular, we show that there exist two regimes corresponding to small and large number of classes. The bounds can be reduced under the additional low noise condition. To…
The "least absolute shrinkage and selection operator" (Lasso) method has been adapted recently for networkstructured datasets. In particular, this network Lasso method allows to learn graph signals from a small number of noisy signal samples by using the total variation of a graph signal for regularization. While efficient and scalable implementations of the network Lasso are available, only little is known about the conditions on the underlying network structure which ensure network Lasso to be accurate. By leveraging concepts of compressed sensing, we address this gap and derive precise cond…
Regression with the lasso penalty is a popular tool for performing dimension reduction when the number of covariates is large. In many applications of the lasso, like in genomics, covariates are subject to measurement error. We study the impact of measurement error on linear regression with the lasso penalty, both analytically and in simulation experiments. A simple method of correction for measurement error in the lasso is then considered. In the large sample limit, the corrected lasso yields sign consistent covariate selection under conditions very similar to the lasso with perfect measureme…
Many applications generate data with an intrinsic network structure such as time series data, image data or social network data. The network Lasso (nLasso) has been proposed recently as a method for joint clustering and optimization of machine learning models for networked data. The nLasso extends the Lasso from sparse linear models to clustered graph signals. This paper explores the duality of nLasso and network flow optimization. We show that, in a very precise sense, nLasso is equivalent to a minimum-cost flow problem on the data network structure. Our main technical result is a concise cha…
We consider first order expansions of convex penalized estimators in high-dimensional regression problems with random designs. Our setting includes linear regression and logistic regression as special cases. For a given penalty function $h$ and the corresponding penalized estimator $\hatβ$, we construct a quantity $η$, the first order expansion of $\hatβ$, such that the distance between $\hatβ$ and $η$ is an order of magnitude smaller than the estimation error $\|\hatβ - β^*\|$. In this sense, the first order expansion $η$ can be thought of as a generalization of influence functions from the m…
Renewable Lasso without Batch-Number Constraints: A Gradient-Enhanced Approach
Department of Mathematics, City University of Hong Kong（香港城市大学数学系）；School of Statistics and Data Science, Jiangxi University of Finance and Economics（江西财经大学统计与数据科学学院）；Philosophy and Social Sciences Laboratory of Data Science in Finance and Economics at the Ministry of Education, Jiangxi University of Finance and Economics（教育部金融与经济数据科学哲学与社会科学实验室，江西财经大学）；School of Statistics, Beijing Normal University（北京师范大学统计学院）；CityUHK Shenzhen Research Institute（城大深圳研究院）
Arizona State University（亚利桑那州立大学）；University of Minnesota（明尼苏达大学）
In this paper, we consider the problem of estimating multiple graphical models simultaneously using the fused lasso penalty, which encourages adjacent graphs to share similar structures. A motivating example is the analysis of brain networks of Alzheimer's disease using neuroimaging data. Specifically, we may wish to estimate a brain network for the normal controls (NC), a brain network for the patients with mild cognitive impairment (MCI), and a brain network for Alzheimer's patients (AD). We expect the two brain networks for NC and MCI to share common structures but not to be identical to ea…
In this paper, we study the problem of signal estimation from noisy non-linear measurements when the unknown $n$-dimensional signal is in the range of an $L$-Lipschitz continuous generative model with bounded $k$-dimensional inputs. We make the assumption of sub-Gaussian measurements, which is satisfied by a wide range of measurement models, such as linear, logistic, 1-bit, and other quantized models. In addition, we consider the impact of adversarial corruptions on these measurements. Our analysis is based on a generalized Lasso approach (Plan and Vershynin, 2016). We first provide a non-unif…
Shandong University（山东大学）；University of Geneva（日内瓦大学）；Los Alamos National Laboratory（洛斯阿拉莫斯国家实验室）
To fit sparse linear associations, a LASSO sparsity inducing penalty with a single hyperparameter provably allows to recover the important features (needles) with high probability in certain regimes even if the sample size is smaller than the dimension of the input vector (haystack). More recently learners known as artificial neural networks (ANN) have shown great successes in many machine learning tasks, in particular fitting nonlinear associations. Small learning rate, stochastic gradient descent algorithm and large training set help to cope with the explosion in the number of parameters pre…
The $\ell_1$-penalized method, or the Lasso, has emerged as an important tool for the analysis of large data sets. Many important results have been obtained for the Lasso in linear regression which have led to a deeper understanding of high-dimensional statistical problems. In this article, we consider a class of weighted $\ell_1$-penalized estimators for convex loss functions of a general form, including the generalized linear models. We study the estimation, prediction, selection and sparsity properties of the weighted $\ell_1$-penalized estimator in sparse, high-dimensional settings where t…
Doshisha University（同志社大学）；Advanced Telecommunications Research Institute International（国际高级电信研究所）
We examine the effect of the Group Lasso (gLasso) regularizer in selecting the salient nodes of Deep Neural Network (DNN) hidden layers by applying a DNN-HMM hybrid speech recognizer to TED Talks speech data. We test two types of gLasso regularization, one for outgoing weight vectors and another for incoming weight vectors, as well as two sizes of DNNs: 2048 hidden layer nodes and 4096 nodes. Furthermore, we compare gLasso and L2 regularizers. Our experiment results demonstrate that our DNN training, in which the gLasso regularizer was embedded, successfully selected the hidden layer nodes tha…
L1 -penalized regression methods such as the Lasso (Tibshirani 1996) that achieve both variable selection and shrinkage have been very popular. An extension of this method is the Fused Lasso (Tibshirani and Wang 2007), which allows for the incorporation of external information into the model. In this article, we develop new and fast algorithms for solving the Fused Lasso which are based on coordinate-wise optimization. This class of algorithms has recently been applied very successfully to solve L1 -penalized problems very quickly (Friedman et al. 2007). As a straightforward coordinate-wise pr…
Sparse prediction with categorical data is challenging even for a moderate number of variables, because one parameter is roughly needed to encode one category or level. The Group Lasso is a well known efficient algorithm for selection continuous or categorical variables, but all estimates related to a selected factor usually differ, so a fitted model may not be sparse. To make the Group Lasso solution sparse, we propose to merge levels of the selected factor, if a difference between its corresponding estimates is less than some predetermined threshold. We prove that under weak conditions our a…
Ride sharing has important implications in terms of environmental, social and individual goals by reducing carbon footprints, fostering social interactions and economizing commuter costs. The ride sharing systems that are commonly available lack adaptive and scalable techniques that can simultaneously learn from the large scale data and predict in real-time dynamic fashion. In this paper, we study such a problem towards a smart city initiative, where a generic ride sharing system is conceived capable of making predictions about ride share opportunities based on the historically recorded data w…
In high dimensional regression settings, sparsity enforcing penalties have proved useful to regularize the data-fitting term. A recently introduced technique called screening rules propose to ignore some variables in the optimization leveraging the expected sparsity of the solutions and consequently leading to faster solvers. When the procedure is guaranteed not to discard variables wrongly the rules are said to be safe. In this work, we propose a unifying framework for generalized linear models regularized with standard sparsity enforcing penalties such as $\ell_1$ or $\ell_1/\ell_2$ norms. O…
In traditional logistic regression models, the link function is often assumed to be linear and continuous in predictors. Here, we consider a threshold model that all continuous features are discretized into ordinal levels, which further determine the binary responses. Both the threshold points and regression coefficients are unknown and to be estimated. For high dimensional data, we propose a fusion penalized logistic threshold regression (FILTER) model, where a fused lasso penalty is employed to control the total variation and shrink the coefficients to zero as a method of variable selection.…
Nowadays, several data analysis problems require for complexity reduction, mainly meaning that they target at removing the non-influential covariates from the model and at delivering a sparse model. When categorical covariates are present, with their levels being dummy coded, the number of parameters included in the model grows rapidly, fact that emphasizes the need for reducing the number of parameters to be estimated. In this case, beyond variable selection, sparsity is also achieved through fusion of levels of covariates which do not differentiate significantly in terms of their influence o…
State Key Laboratory of Software Engineering, School of Computer, Wuhan University（武汉大学计算机学院软件工程国家重点实验室）；National Center for Mathematics and Interdisciplinary Sciences, Academy of Mathematics and Systems Science, Chinese Academy of Sciences（中国科学院数学与系统科学研究院国家数学与交叉科学中心）
Molecular profiling data (e.g., gene expression) has been used for clinical risk prediction and biomarker discovery. However, it is necessary to integrate other prior knowledge like biological pathways or gene interaction networks to improve the predictive ability and biological interpretability of biomarkers. Here, we first introduce a general regularized Logistic Regression (LR) framework with regularized term $λ\|\bm{w}\|_1 + η\bm{w}^T\bm{M}\bm{w}$, which can reduce to different penalties, including Lasso, elastic net, and network-regularized terms with different $\bm{M}$. This framework ca…
University of Delaware（特拉华大学）；Dalhousie University（达尔豪斯大学）
One main obstacle for the wide use of deep learning in medical and engineering sciences is its interpretability. While neural network models are strong tools for making predictions, they often provide little information about which features play significant roles in influencing the prediction accuracy. To overcome this issue, many regularization procedures for learning with neural networks have been proposed for dropping non-significant features. Unfortunately, the lack of theoretical results casts doubt on the applicability of such pipelines. In this work, we propose and establish a theoretic…
University of Leeds（利兹大学）；University of Cambridge（剑桥大学）
Classically, statistical datasets have a larger number of data points than features ($n > p$). The standard model of classical statistics caters for the case where data points are considered conditionally independent given the parameters. However, for $n\approx p$ or $p > n$ such models are poorly determined. Kalaitzis et al. (2013) introduced the Bigraphical Lasso, an estimator for sparse precision matrices based on the Cartesian product of graphs. Unfortunately, the original Bigraphical Lasso algorithm is not applicable in case of large p and n due to memory requirements. We exploit eigenval…
University of Delaware（特拉华大学）；Dalhousie University（达尔豪西大学）
One of the most important steps toward interpretability and explainability of neural network models is feature selection, which aims to identify the subset of relevant features. Theoretical results in the field have mostly focused on the prediction aspect of the problem with virtually no work on feature selection consistency for deep neural networks due to the model's severe nonlinearity and unidentifiability. This lack of theoretical foundation casts doubt on the applicability of deep learning to contexts where correct interpretations of the features play a central role. In this work, we inve…
IFM Lab（IFM实验室）；Florida State University（佛罗里达州立大学）
The regression of multiple inter-connected sequence data is a problem in various disciplines. Formally, we name the regression problem of multiple inter-connected data entities as the "dynamic network regression" in this paper. Within the problem of stock forecasting or traffic speed prediction, we need to consider both the trends of the entities and the relationships among the entities. A majority of existing approaches can't capture that information together. Some of the approaches are proposed to deal with the sequence data, like LSTM. The others use the prior knowledge in a network to get …
It is known that the Thresholded Lasso (TL), SCAD or MCP correct intrinsic estimation bias of the Lasso. In this paper we propose an alternative method of improving the Lasso for predictive models with general convex loss functions which encompass normal linear models, logistic regression, quantile regression or support vector machines. For a given penalty we order the absolute values of the Lasso non-zero coefficients and then select the final model from a small nested family by the Generalized Information Criterion. We derive exponential upper bounds on the selection error of the method. The…
Nowadays an increasing amount of data is available and we have to deal with models in high dimension (number of covariates much larger than the sample size). Under sparsity assumption it is reasonable to hope that we can make a good estimation of the regression parameter. This sparsity assumption as well as a block structuration of the covariates into groups with similar modes of behavior is for example quite natural in genomics. A huge amount of scientific literature exists for Gaussian linear models including the Lasso estimator and also the Group Lasso estimator which promotes group sparsit…
We apply the cyclic coordinate descent algorithm of Friedman, Hastie and Tibshirani (2010) to the fitting of a conditional logistic regression model with lasso ($\ell_1$) and elastic net penalties. The sequential strong rules of Tibshirani et al (2012) are also used in the algorithm and it is shown that these offer a considerable speed up over the standard coordinate descent algorithm with warm starts. Once implemented, the algorithm is used in simulation studies to compare the variable selection and prediction performance of the conditional logistic regression model against that of its uncond…
