A Machine Learning Approach to Adaptive Covariance Localization
Virginia Polytechnic Institute and State University(弗吉尼亚理工学院暨州立大学);Argonne National Laboratory(阿贡国家实验室);Statistical and Applied Mathematical Science Institute(统计与应用数学科学研究所)
Data assimilation plays a key role in large-scale atmospheric weather forecasting, where the state of the physical system is estimated from model outputs and observations, and is then used as initial condition to produce accurate future forecasts. The Ensemble Kalman Filter (EnKF) provides a practical implementation of the statistical solution of the data assimilation problem and has gained wide popularity as. This success can be attributed to its simple formulation and ease of implementation. EnKF is a Monte-Carlo algorithm that solves the data assimilation problem by sampling the probability distributions involved in Bayes theorem. Because of this, all flavors of EnKF are fundamentally prone to sampling errors when the ensemble size is small. In typical weather forecasting applications, the model state space has dimension $10^{9}-10^{12}$, while the ensemble size typically ranges between $30-100$ members. Sampling errors manifest themselves as long-range spurious correlations and have been shown to cause filter divergence. To alleviate this effect covariance localization dampens spurious correlations between state variables located at a large distance in the physical space, via an empirical distance-dependent function. The quality of the resulting analysis and forecast is greatly influenced by the choice of the localization function parameters, e.g., the radius of influence. The localization radius is generally tuned empirically to yield desirable results.This work, proposes two adaptive algorithms for covariance localization in the EnKF framework, both based on a machine learning approach. The first algorithm adapts the localization radius in time, while the second algorithm tunes the localization radius in both time and space. Numerical experiments carried out with the Lorenz-96 model, and a quasi-geostrophic model, reveal the potential of the proposed machine learning approaches.
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A novel adaptive Markov chain Monte Carlo algorithm is presented. The algorithm utilizes sparsity in the partial correlation structure of a density to efficiently estimate the covariance matrix through the Cholesky factor of the precision matrix. The algorithm also utilizes the sparsity to sample efficiently from both MALA and Metropolis Hasting random walk proposals. Further, an algorithm that estimates the partial correlation structure of a density is proposed. Combining this with the Cholesky factor estimation algorithm results in an efficient black-box AMCMC method that can be used for gen…
The Ensemble Kalman Filters (EnKF) employ a Monte-Carlo approach to represent covariance information, and are affected by sampling errors in operational settings where the number of model realizations is much smaller than the model state dimension. To alleviate the effects of these errors EnKF relies on model-specific heuristics such as covariance localization, which takes advantage of the spatial locality of correlations among the model variables. This work proposes an approach to alleviate sampling errors that utilizes a locally averaged-in-time dynamics of the model, described in terms of a…
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In this paper we consider estimation of sparse covariance matrices and propose a thresholding procedure which is adaptive to the variability of individual entries. The estimators are fully data driven and enjoy excellent performance both theoretically and numerically. It is shown that the estimators adaptively achieve the optimal rate of convergence over a large class of sparse covariance matrices under the spectral norm. In contrast, the commonly used universal thresholding estimators are shown to be sub-optimal over the same parameter spaces. Support recovery is also discussed. The adaptive …
Estimation of the high-dimensional banded covariance matrix is widely used in multivariate statistical analysis. To ensure the validity of estimation, we aim to test the hypothesis that the covariance matrix is banded with a certain bandwidth under the high-dimensional framework. Though several testing methods have been proposed in the literature, the existing tests are only powerful for some alternatives with certain sparsity levels, whereas they may not be powerful for alternatives with other sparsity structures. The goal of this paper is to propose a new test for the bandedness of high-dime…
Scalable Dirichlet Process Mixture Models with Unknown Concentration and Adaptive Covariance for High-Dimensional Clustering Applied to Leukemia Transcriptomics
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Covariance matrix tapers have a long history in signal processing and related fields. Examples of applications include autoregressive models (promoting a banded structure) or beamforming (widening the spectral null width associated with an interferer). In this paper, the focus is on high-dimensional setting where the dimension $p$ is high, while the data aspect ratio $n/p$ is low. We propose an estimator called Tabasco (TApered or BAnded Shrinkage COvariance matrix) that shrinks the tapered sample covariance matrix towards a scaled identity matrix. We derive optimal and estimated (data adaptiv…
Estimation of a precision matrix (i.e., inverse covariance matrix) is widely used to exploit conditional independence among continuous variables. The influence of abnormal observations is exacerbated in a high dimensional setting as the dimensionality increases. In this work, we propose robust estimation of the inverse covariance matrix based on an $l_1$ regularized objective function with a weighted sample covariance matrix. The robustness of the proposed objective function can be justified by a nonparametric technique of the integrated squared error criterion. To address the non-convexity of…
This article improves on existing methods to estimate the spectral density of stationary and nonstationary time series assuming a Gaussian process prior. By optimising an appropriate eigendecomposition using a smoothing spline covariance structure, our method more appropriately models data with both simple and complex periodic structure. We further justify the utility of this optimal eigendecomposition by investigating the performance of alternative covariance functions other than smoothing splines. We show that the optimal eigendecomposition provides a material improvement, while the other co…
We introduce a new sparse estimator of the covariance matrix for high-dimensional models in which the variables have a known ordering. Our estimator, which is the solution to a convex optimization problem, is equivalently expressed as an estimator which tapers the sample covariance matrix by a Toeplitz, sparsely-banded, data-adaptive matrix. As a result of this adaptivity, the convex banding estimator enjoys theoretical optimality properties not attained by previous banding or tapered estimators. In particular, our convex banding estimator is minimax rate adaptive in Frobenius and operator nor…