Recently, distributed processing of large dynamic graphs has become very popular, especially in certain domains such as social network analysis, Web graph analysis and spatial network analysis. In this context, many distributed/parallel graph processing systems have been proposed, such as Pregel, GraphLab, and Trinity. These systems can be divided into two categories: (1) vertex-centric and (2) block-centric approaches. In vertex-centric approaches, each vertex corresponds to a process, and message are exchanged among vertices. In block-centric approaches, the unit of computation is a block, a connected subgraph of the graph, and message exchanges occur among blocks. In this paper, we are considering the issues of scale and dynamism in the case of block-centric approaches. We present bladyg, a block-centric framework that addresses the issue of dynamism in large-scale graphs. We present an implementation of BLADYG on top of akka framework. We experimentally evaluate the performance of the proposed framework.
Graph-based data structures have drawn great attention in recent years. The large and rapidly growing trend on developing graph processing systems focuses mostly on improving the performance by preprocessing the input graph and modifying its layout. These systems usually take several hours to days to complete processing a single graph on high-end machines, let alone the overhead of pre-processing which most of the time can be dominant. Yet for most graph applications the exact answer is not always crucial, and providing a rough estimate of the final result is adequate. Approximate computing is…
Not only with the large host memory for supporting large scale graph processing, GPU-accelerated heterogeneous architecture can also provide a great potential for high-performance computing. However, few existing heterogeneous systems can exploit both hardware advantages to enable the scale-up performance for graph processing due to the limited CPU-GPU transmission efficiency. In this paper, we investigate the transmission inefficiency problem of heterogeneous graph systems. Our key insight is that the transmission efficiency for heterogeneous graph processing can be greatly improved by simply…
Efficient processing of large-scale graphs in distributed environments has been an increasingly popular topic of research in recent years. Inter-connected data that can be modeled as graphs arise in application domains such as machine learning, recommendation, web search, and social network analysis. Writing distributed graph applications is inherently hard and requires programming models that can cover a diverse set of problem domains, including iterative refinement algorithms, graph transformations, graph aggregations, pattern matching, ego-network analysis, and graph traversals. Several hig…
Graph is a well known data structure to represent the associated relationships in a variety of applications, e.g., data science and machine learning. Despite a wealth of existing efforts on developing graph processing systems for improving the performance and/or energy efficiency on traditional architectures, dedicated hardware solutions, also referred to as graph processing accelerators, are essential and emerging to provide the benefits significantly beyond those pure software solutions can offer. In this paper, we conduct a systematical survey regarding the design and implementation of grap…
In recent years, the graph partitioning problem gained importance as a mandatory preprocessing step for distributed graph processing on very large graphs. Existing graph partitioning algorithms minimize partitioning latency by assigning individual graph edges to partitions in a streaming manner --- at the cost of reduced partitioning quality. However, we argue that the mere minimization of partitioning latency is not the optimal design choice in terms of minimizing total graph analysis latency, i.e., the sum of partitioning and processing latency. Instead, for complex and long-running graph pr…
Graph is a ubiquitous structure in many domains. The rapidly increasing data volume calls for efficient and scalable graph data processing. In recent years, designing distributed graph processing systems has been an increasingly important area to fulfil the demands of processing big graphs in a distributed environment. Though a variety of distributed graph processing systems have been developed, very little attention has been paid to achieving a good combinational system performance in terms of usage simplicity, efficiency and scalability. To contribute to the study of distributed graph proces…
The value of graph-based big data can be unlocked by exploring the topology and metrics of the networks they represent, and the computational approaches to this exploration take on many forms. The use-case of performing global computations over a graph, it is first ingested into a graph processing system from one of many digital representations. Extracting information from graphs involves processing all their elements globally, and can be done with single-machine systems (with varying approaches to hardware usage), distributed systems (either homogeneous or heterogeneous groups of machines) an…
Graph processing systems are important in the big data domain. However, processing graphs in parallel often introduces redundant computations in existing algorithms and models. Prior work has proposed techniques to optimize redundancies for the out-of-core graph systems, rather than the distributed graph systems. In this paper, we study various state-of-the-art distributed graph systems and observe root causes for these pervasively existing redundancies. To reduce redundancies without sacrificing parallelism, we further propose SLFE, a distributed graph processing system, designed with the pri…
Recent studies showed that single-machine graph processing systems can be as highly competitive as cluster-based approaches on large-scale problems. While several out-of-core graph processing systems and computation models have been proposed, the high disk I/O overhead could significantly reduce performance in many practical cases. In this paper, we propose GraphMP to tackle big graph analytics on a single machine. GraphMP achieves low disk I/O overhead with three techniques. First, we design a vertex-centric sliding window (VSW) computation model to avoid reading and writing vertices on disk.…
With the advent of the big data, graph are processed in an iterative manner, which incrementally described in the form of graph in big data applications. Most currently, graph processing methods treat the underlying map data as black boxes. However, as shown in experimental evaluation, graph structures often have diversity, different graph processing methods are very sensitive to the graph structure and show different performance for different data sets. Based on this, a graph processing method for graph structure analysis is proposed in this paper: (1) This paper calculates the vertex activit…
Graph partitioning drives graph processing in distributed, disk-based and NUMA-aware systems. A commonly used partitioning goal is to balance the number of edges per partition in conjunction with minimizing the edge or vertex cut. While this type of partitioning is computationally expensive, we observe that such topology-driven partitioning nonetheless results in computational load imbalance. We propose Vertex- and Edge-Balanced Ordering (VEBO): balance the number of edges and the number of unique destinations of those edges. VEBO optimally balances edges and vertices for graphs with a power-l…
The industry and academia have proposed many distributed graph processing systems. However, the existing systems are not friendly enough for users like data analysts and algorithm engineers. On the one hand, the programing models and interfaces differ a lot in the existing systems, leading to high learning costs and program migration costs. On the other hand, these graph processing systems are tightly bound to the underlying distributed computing platforms, requiring users to be familiar with distributed computing. To improve the usability of distributed graph processing, we propose a unified …
Efficient Graph processing is challenging because of the irregularity of graph algorithms. Using GPUs to accelerate irregular graph algorithms is even more difficult to be efficient, since GPU's highly structured SIMT architecture is not a natural fit for irregular applications. With lots of previous efforts spent on subtly mapping graph algorithms onto the GPU, the performance of graph processing on GPUs is still highly memory-latency bound, leading to low utilization of compute resources. Random memory accesses generated by the sparse graph data structure are the major causes of this signifi…
Analyzing large-scale graphs provides valuable insights in different application scenarios. While many graph processing systems working on top of distributed infrastructures have been proposed to deal with big graphs, the tasks of profiling and debugging their massive computations remain time consuming and error-prone. This paper presents GiViP, a visual profiler for distributed graph processing systems based on a Pregel-like computation model. GiViP captures the huge amount of messages exchanged throughout a computation and provides an interactive user interface for the visual analysis of the…
Intel Xeon Phi many-integrated-core (MIC) architectures usher in a new era of terascale integration. Among emerging killer applications, parallel graph processing has been a critical technique to analyze connected data. In this paper, we empirically evaluate various computing platforms including an Intel Xeon E5 CPU, a Nvidia Geforce GTX1070 GPU and an Xeon Phi 7210 processor codenamed Knights Landing (KNL) in the domain of parallel graph processing. We show that the KNL gains encouraging performance when processing graphs, so that it can become a promising solution to accelerating multi-threa…
The vertex-centric programming model is an established computational paradigm recently incorporated into distributed processing frameworks to address challenges in large-scale graph processing. Billion-node graphs that exceed the memory capacity of standard machines are not well-supported by popular Big Data tools like MapReduce, which are notoriously poor-performing for iterative graph algorithms such as PageRank. In response, a new type of framework challenges one to Think Like A Vertex (TLAV) and implements user-defined programs from the perspective of a vertex rather than a graph. Such an …
CIM/E is an easy and efficient electric power model exchange standard between different Energy Management System vendors. With the rapid growth of data size and system complexity, the traditional relational database is not the best option to store and process the data. In contrast, the graph database and graph computation show their potential advantages to handle the power system data and perform real-time data analytics and computation. The graph concept fits power grid data naturally because of the fundamental structure similarity. Vertex and edge in the graph database can act as both a para…
In a general graph data structure like an adjacency matrix, when edges are homogeneous, the connectivity of two nodes can be sufficiently represented using a single bit. This insight has, however, not yet been adequately exploited by the existing matrix-centric graph processing frameworks. This work fills the void by systematically exploring the bit-level representation of graphs and the corresponding optimizations to the graph operations. It proposes a two-level representation named Bit-Block Compressed Sparse Row (B2SR) and presents a series of optimizations to the graph operations on B2SR b…
With the magnitude of graph-structured data continually increasing, graph processing systems that can scale-out and scale-up are needed to handle extreme-scale datasets. While existing distributed out-of-core solutions have made it possible, they suffer from limited performance due to excessive I/O and communication costs. We present DFOGraph, a distributed fully-out-of-core graph processing system that applies and assembles multiple techniques to enable I/O- and communication-efficient processing. DFOGraph builds upon two-level column-oriented partition with adaptive compressed representation…
Recently, research communities highlight the necessity of formulating a scalability continuum for large-scale graph processing, which gains the scale-out benefits from distributed graph systems, and the scale-up benefits from high-performance accelerators. To this end, we propose a middleware, called the GX-plug, for the ease of integrating the merits of both. As a middleware, the GX-plug is versatile in supporting different runtime environments, computation models, and programming models. More, for improving the middleware performance, we study a series of techniques, including pipeline shuff…
The Bulk Synchronous Parallel(BSP) computational model has emerged as the dominant distributed framework to build large-scale iterative graph processing systems. While its implementations(e.g., Pregel, Giraph, and Hama) achieve high scalability, frequent synchronization and communication among the workers can cause substantial parallel inefficiency. To help address this critical concern, this paper introduces the GraphHP(Graph Hybrid Processing) platform which inherits the friendly vertex-centric BSP programming interface and optimizes its synchronization and communication overhead. To achieve…
With the rapidly growing demand of graph processing in the real scene, they have to efficiently handle massive concurrent jobs. Although existing work enable to efficiently handle single graph processing job, there are plenty of memory access redundancy caused by ignoring the characteristic of data access correlations. Motivated such an observation, we proposed two-level scheduling strategy in this paper, which enables to enhance the efficiency of data access and to accelerate the convergence speed of concurrent jobs. Firstly, correlations-aware job scheduling allows concurrent jobs to process…
Processing large graphs with memory-limited GPU needs to resolve issues of host-GPU data transfer, which is a key performance bottleneck. Existing GPU-accelerated graph processing frameworks reduce the data transfers by managing the active subgraph transfer at runtime. Some frameworks adopt explicit transfer management approaches based on explicit memory copy with filter or compaction. In contrast, others adopt implicit transfer management approaches based on on-demand access with zero-copy or unified-memory. Having made intensive analysis, we find that as the active vertices evolve, the perfo…
The increasing scale and wealth of inter-connected data, such as those accrued by social network applications, demand the design of new techniques and platforms to efficiently derive actionable knowledge from large-scale graphs. However, real-world graphs are famously difficult to process efficiently. Not only they have a large memory footprint, but also most graph algorithms entail memory access patterns with poor locality, data-dependent parallelism and a low compute-to-memory access ratio. Moreover, most real-world graphs have a highly heterogeneous node degree distribution, hence partition…
Nowadays, in the big data era, social networks, graph databases, knowledge graphs, electronic commerce etc. demand efficient and scalable capability to process an ever increasing volume of graph-structured data. To meet the challenge, two mainstream distributed programming models, vertex-centric (VC) and subgraph-centric (SC) were proposed. Compared to the VC model, the SC model converges faster with less communication overhead on well-partitioned graphs, and is easy to program due to the "think like a graph" philosophy. The edge-cut method is considered as a natural choice of subgraph-centric…
For large-scale graph analytics on the GPU, the irregularity of data access and control flow, and the complexity of programming GPUs have been two significant challenges for developing a programmable high-performance graph library. "Gunrock", our graph-processing system designed specifically for the GPU, uses a high-level, bulk-synchronous, data-centric abstraction focused on operations on a vertex or edge frontier. Gunrock achieves a balance between performance and expressiveness by coupling high performance GPU computing primitives and optimization strategies with a high-level programming mo…
High parallel framework has been proved to be very suitable for graph processing. There are various work to optimize the implementation in FPGAs, a pipeline parallel device. The key to make use of the parallel performance of FPGAs is to process graph data in pipeline model and take advantage of on-chip memory to realize necessary locality process. This paper proposes a modularize graph processing framework, which focus on the whole executing procedure with the extremely different degree of parallelism. The framework has three contributions. First, the combination of vertex-centric and edge-cen…
Graph signal processing is a framework to handle graph structured data. The fundamental concept is graph shift operator, giving rise to the graph Fourier transform. While the graph Fourier transform is a centralized procedure, distributed graph signal processing algorithms are needed to address challenges such as scalability and privacy. In this paper, we develop a theory of distributed graph signal processing based on the classical notion of message passing. However, we generalize the definition of a message to permit more abstract mathematical objects. The framework provides an alternative p…
As large graph processing emerges, we observe a costly fork-processing pattern (FPP) that is common in many graph algorithms. The unique feature of the FPP is that it launches many independent queries from different source vertices on the same graph. For example, an algorithm in analyzing the network community profile can execute Personalized PageRanks that start from tens of thousands of source vertices at the same time. We study the efficiency of handling FPPs in state-of-the-art graph processing systems on multi-core architectures. We find that those systems suffer from severe cache miss pe…
Graph processing has become an important part of various areas, such as machine learning, computational sciences, medical applications, social network analysis, and many others. Various graphs, for example web or social networks, may contain up to trillions of edges. The sheer size of such datasets, combined with the irregular nature of graph processing, poses unique challenges for the runtime and the consumed power. Field Programmable Gate Arrays (FPGAs) can be an energy-efficient solution to deliver specialized hardware for graph processing. This is reflected by the recent interest in develo…
The rapidly growing number of large network analysis problems has led to the emergence of many parallel and distributed graph processing systems---one survey in 2014 identified over 80. Since then, the landscape has evolved; some packages have become inactive while more are being developed. Determining the best approach for a given problem is infeasible for most developers. To enable easy, rigorous, and repeatable comparison of the capabilities of such systems, we present an approach and associated software for analyzing the performance and scalability of parallel, open-source graph libraries.…
Graphs may be used to represent many different problem domains -- a concrete example is that of detecting communities in social networks, which are represented as graphs. With big data and more sophisticated applications becoming widespread in recent years, graph processing has seen an emergence of requirements pertaining data volume and volatility. This multidisciplinary study presents a review of relevant distributed graph processing systems. Herein they are presented in groups defined by common traits (distributed processing paradigm, type of graph operations, among others), with an overvie…
Extensive prior research has focused on alleviating the characteristic poor cache locality of graph analytics workloads. However, graph pre-processing tasks remain relatively unexplored. In many important scenarios, graph pre-processing tasks can be as expensive as the downstream graph analytics kernel. We observe that Propagation Blocking (PB), a software optimization designed for SpMV kernels, generalizes to many graph analytics kernels as well as common pre-processing tasks. In this work, we identify the lingering inefficiencies of a PB execution on conventional multicores and propose archi…
Arising user-centric graph applications such as route planning and personalized social network analysis have initiated a shift of paradigms in modern graph processing systems towards multi-query analysis, i.e., processing multiple graph queries in parallel on a shared graph. These applications generate a dynamic number of localized queries around query hotspots such as popular urban areas. However, existing graph processing systems are not yet tailored towards these properties: The employed methods for graph partitioning and synchronization management disregard query locality and dynamism whic…
Large-scale graph processing has drawn great attention in recent years. Most of the modern-day datacenter workloads can be represented in the form of Graph Processing such as MapReduce etc. Consequently, a lot of designs for Domain-Specific Accelerators have been proposed for Graph Processing. Spatial Architectures have been promising in the execution of Graph Processing, where the graph is partitioned into several nodes and each node works in parallel. We conduct experiments to analyze the on-chip movement of data in graph processing on a Spatial Architecture. Based on the observations, we id…
The development of scalable, representative, and widely adopted benchmarks for graph data systems have been a question for which answers has been sought for decades. We conduct an in-depth study of the existing literature on benchmarks for graph data management and processing, covering 20 different benchmarks developed during the last 15 years. We categorize the benchmarks into three areas focusing on benchmarks for graph processing systems, graph database benchmarks, and bigdata benchmarks with graph processing workloads. This systematic approach allows us to identify multiple issues existing…
We propose techniques for processing SPARQL queries over a large RDF graph in a distributed environment. We adopt a "partial evaluation and assembly" framework. Answering a SPARQL query Q is equivalent to finding subgraph matches of the query graph Q over RDF graph G. Based on properties of subgraph matching over a distributed graph, we introduce local partial match as partial answers in each fragment of RDF graph G. For assembly, we propose two methods: centralized and distributed assembly. We analyze our algorithms from both theoretically and experimentally. Extensive experiments over both r…
Designing flexible graph kernels that can run well on various platforms is a crucial research problem due to the frequent usage of graphs for modeling data and recent architectural advances and variety. In this work, we propose a novel graph processing framework, PGAbB (Parallel Graph Algorithms by Blocks), for modern shared-memory heterogeneous platforms. Our framework implements a block-based programming model. This allows a user to express a graph algorithm using kernels that operate on subgraphs. PGAbB support graph computations that fit in host DRAM but not in GPU device memory, and provi…
This paper presents GRAPHR, the first ReRAM-based graph processing accelerator. GRAPHR follows the principle of near-data processing and explores the opportunity of performing massive parallel analog operations with low hardware and energy cost. The analog computation is suit- able for graph processing because: 1) The algorithms are iterative and could inherently tolerate the imprecision; 2) Both probability calculation (e.g., PageRank and Collaborative Filtering) and typical graph algorithms involving integers (e.g., BFS/SSSP) are resilient to errors. The key insight of GRAPHR is that if a ve…
A distributed semantic graph processing system that provides locality control, indexing, graph query, and parallel processing capabilities is presented.
Graphs are by nature unifying abstractions that can leverage interconnectedness to represent, explore, predict, and explain real- and digital-world phenomena. Although real users and consumers of graph instances and graph workloads understand these abstractions, future problems will require new abstractions and systems. What needs to happen in the next decade for big graph processing to continue to succeed?
Importing relationships into a running graph database using multiple threads running concurrently is a difficult task, as multiple threads cannot write information to the same node at the same time. Here we present an algorithm in which relationships are sorted into bins, then imported such that no two threads ever access the same node concurrently. When this algorithm was implemented as a procedure to run on the Neo4j graph database, it reduced the time to import relationships by up to 69% when 32 threads were used.
We propose Slim Graph: the first programming model and framework for practical lossy graph compression that facilitates high-performance approximate graph processing, storage, and analytics. Slim Graph enables the developer to express numerous compression schemes using small and programmable compression kernels that can access and modify local parts of input graphs. Such kernels are executed in parallel by the underlying engine, isolating developers from complexities of parallel programming. Our kernels implement novel graph compression schemes that preserve numerous graph properties, for exam…
Citadel（城堡投资）；New Jersey Institute of Technology（新泽西理工学院）；IBM Research（IBM研究院）
This paper considers the problem of resource allocation in stream processing, where continuous data flows must be processed in real time in a large distributed system. To maximize system throughput, the resource allocation strategy that partitions the computation tasks of a stream processing graph onto computing devices must simultaneously balance workload distribution and minimize communication. Since this problem of graph partitioning is known to be NP-complete yet crucial to practical streaming systems, many heuristic-based algorithms have been developed to find reasonably good solutions. I…
We study distributed graph algorithms that adopt an iterative vertex-centric framework for graph processing, popularized by the Google's Pregel system. Since then, there are several attempts to implement many graph algorithms in a vertex-centric framework, as well as efforts to design optimization techniques for improving the efficiency. However, to the best of our knowledge, there has not been any systematic study to compare these vertex-centric implementations with their sequential counterparts. Our paper addresses this gap in two ways. (1) We analyze the computational complexity of such imp…
École Polytechnique Fédérale de Lausanne（洛桑联邦理工学院）；Imperial College London（帝国理工学院）
We study the generation of dependent random numbers in a distributed fashion in order to enable privatized distributed learning by networked agents. We propose a method that we refer to as local graph-homomorphic processing; it relies on the construction of particular noises over the edges to ensure a certain level of differential privacy. We show that the added noise does not affect the performance of the learned model. This is a significant improvement to previous works on differential privacy for distributed algorithms, where the noise was added in a less structured manner without respectin…
