Unsupervised learning aims at the discovery of hidden structure that drives the observations in the real world. It is essential for success in modern machine learning. Latent variable models are versatile in unsupervised learning and have applications in almost every domain. Training latent variable models is challenging due to the non-convexity of the likelihood objective. An alternative method is based on the spectral decomposition of low order moment tensors. This versatile framework is guaranteed to estimate the correct model consistently. My thesis spans both theoretical analysis of tensor decomposition framework and practical implementation of various applications. This thesis presents theoretical results on convergence to globally optimal solution of tensor decomposition using the stochastic gradient descent, despite non-convexity of the objective. This is the first work that gives global convergence guarantees for the stochastic gradient descent on non-convex functions with exponentially many local minima and saddle points. This thesis also presents large-scale deployment of spectral methods carried out on various platforms. Dimensionality reduction techniques such as random projection are incorporated for a highly parallel and scalable tensor decomposition algorithm. We obtain a gain in both accuracies and in running times by several orders of magnitude compared to the state-of-art variational methods. To solve real world problems, more advanced models and learning algorithms are proposed. This thesis discusses generalization of LDA model to mixed membership stochastic block model for learning user communities in social network, convolutional dictionary model for learning word-sequence embeddings, hierarchical tensor decomposition and latent tree structure model for learning disease hierarchy, and spatial point process mixture model for detecting cell types in neuroscience.
As the Internet developed rapidly, it is important to choose suitable web services from a wide range of candidates. Quality of service (QoS) describes the performance of a web service dynamically with respect to the service requested by the service consumer. Moreover, the latent factorization of tenors (LFT) is very effective for discovering temporal patterns in high dimensional and sparse (HiDS) tensors. However, current LFT models suffer from a low convergence rate and rarely account for the effects of outliers. To address the above problems, this paper proposes an Alternating direction meth…
University of California, Irvine（加州大学欧文分校）；Microsoft Research, New England（微软研究院新英格兰分院）
We provide guarantees for learning latent variable models emphasizing on the overcomplete regime, where the dimensionality of the latent space can exceed the observed dimensionality. In particular, we consider multiview mixtures, spherical Gaussian mixtures, ICA, and sparse coding models. We provide tight concentration bounds for empirical moments through novel covering arguments. We analyze parameter recovery through a simple tensor power update algorithm. In the semi-supervised setting, we exploit the label or prior information to get a rough estimate of the model parameters, and then refine…
Georgia Institute of Technology（佐治亚理工学院）；University of California Irvine（加州大学欧文分校）
Spectral methods have greatly advanced the estimation of latent variable models, generating a sequence of novel and efficient algorithms with strong theoretical guarantees. However, current spectral algorithms are largely restricted to mixtures of discrete or Gaussian distributions. In this paper, we propose a kernel method for learning multi-view latent variable models, allowing each mixture component to be nonparametric. The key idea of the method is to embed the joint distribution of a multi-view latent variable into a reproducing kernel Hilbert space, and then the latent parameters are rec…
We introduce an online tensor decomposition based approach for two latent variable modeling problems namely, (1) community detection, in which we learn the latent communities that the social actors in social networks belong to, and (2) topic modeling, in which we infer hidden topics of text articles. We consider decomposition of moment tensors using stochastic gradient descent. We conduct optimization of multilinear operations in SGD and avoid directly forming the tensors, to save computational and storage costs. We present optimized algorithm in two platforms. Our GPU-based implementation exp…
Hong Kong University of Science and Technology（香港科技大学）；Ohio State University（俄亥俄州立大学）
We introduce a unified framework, formulated as general latent space models, to study complex higher-order network interactions among multiple entities. Our framework covers several popular models in recent network analysis literature, including mixture multi-layer latent space model and hypergraph latent space model. We formulate the relationship between the latent positions and the observed data via a generalized multilinear kernel as the link function. While our model enjoys decent generality, its maximum likelihood parameter estimation is also convenient via a generalized tensor decomposit…
Graduate School of Information Science and Technology, The University of Tokyo（东京大学信息科学与技术研究生院）；Graduate School of Arts and Sciences, The University of Tokyo（东京大学文理研究生院）
Differentiable Causal Discovery For Latent Hierarchical Causal Models
University of California San Diego（加利福尼亚大学圣迭戈分校）；Carnegie Mellon University（卡内基梅隆大学）；Mohamed bin Zayed University of Artificial Intelligence（穆罕默德·本·扎耶德人工智能大学）
Discovering and parameterising latent confounders represent important and challenging problems in causal structure learning and density estimation respectively. In this paper, we focus on both discovering and learning the distribution of latent confounders. This task requires solutions that come from different areas of statistics and machine learning. We combine elements of variational Bayesian methods, expectation-maximisation, hill-climbing search, and structure learning under the assumption of causal insufficiency. We propose two learning strategies; one that maximises model selection accur…
Traceable Latent Variable Discovery Based on Multi-Agent Collaboration
Southwestern University of Finance and Economics（西南财经大学）；Hunan University of Technology and Business（湖南工业大学）；Xiangjiang Laboratory（湘江实验室）；Emory University（埃默里大学）
University of Texas, Austin（德克萨斯大学奥斯汀分校）；University of California, Berkeley（加州大学伯克利分校）
In this article we propose and validate an unsupervised probabilistic model, Gaussian Latent Dirichlet Allocation (GLDA), for the problem of discrete state discovery from repeated, multivariate psychophysiological samples collected from multiple, inherently distinct, individuals. Psychology and medical research heavily involves measuring potentially related but individually inconclusive variables from a cohort of participants to derive diagnosis, necessitating clustering analysis. Traditional probabilistic clustering models such as Gaussian Mixture Model (GMM) assume a global mixture of compon…
Causal discovery from data affected by latent confounders is an important and difficult challenge. Causal functional model-based approaches have not been used to present variables whose relationships are affected by latent confounders, while some constraint-based methods can present them. This paper proposes a causal functional model-based method called repetitive causal discovery (RCD) to discover the causal structure of observed variables affected by latent confounders. RCD repeats inferring the causal directions between a small number of observed variables and determines whether the relatio…
A nonnegative latent factorization of tensors (NLFT) model can well model the temporal pattern hidden in nonnegative quality-of-service (QoS) data for predicting the unobserved ones with high accuracy. However, existing NLFT models' objective function is based on Euclidean distance, which is only a special case of $β$-divergence. Hence, can we build a generalized NLFT model via adopting $β$-divergence to achieve prediction accuracy gain? To tackle this issue, this paper proposes a $β$-divergence-based NLFT model ($β$-NLFT). Its ideas are two-fold 1) building a learning objective with $β$-diver…
Carnegie Mellon University（卡内基梅隆大学）；Beijing Technology and Business University（北京工商大学）；Mohamed bin Zayed University of Artificial Intelligence（穆罕默德·本·扎耶德人工智能大学）
Most causal discovery procedures assume that there are no latent confounders in the system, which is often violated in real-world problems. In this paper, we consider a challenging scenario for causal structure identification, where some variables are latent and they form a hierarchical graph structure to generate the measured variables; the children of latent variables may still be latent and only leaf nodes are measured, and moreover, there can be multiple paths between every pair of variables (i.e., it is beyond tree structure). We propose an estimation procedure that can efficiently locate…
In Bayesian Networks (BNs), the direction of edges is crucial for causal reasoning and inference. However, Markov equivalence class considerations mean it is not always possible to establish edge orientations, which is why many BN structure learning algorithms cannot orientate all edges from purely observational data. Moreover, latent confounders can lead to false positive edges. Relatively few methods have been proposed to address these issues. In this work, we present the hybrid mFGS-BS (majority rule and Fast Greedy equivalence Search with Bayesian Scoring) algorithm for structure learning …
Learning Discrete Latent Variable Structures with Tensor Rank Conditions
School of Computer Science, Guangdong University of Technology（广东工业大学计算机学院）；Mohamed bin Zayed University of Artificial Intelligence（穆罕默德·本·扎耶德人工智能大学）；Beijing Technology and Business University（北京工商大学）；Zhejiang University（浙江大学）；Carnegie Mellon University（卡内基梅隆大学）
Max Planck Institute for Biological Cybernetics（马克斯·普朗克生物控制论研究所）
In nonlinear latent variable models or dynamic models, if we consider the latent variables as confounders (common causes), the noise dependencies imply further relations between the observed variables. Such models are then closely related to causal discovery in the presence of nonlinear confounders, which is a challenging problem. However, generally in such models the observation noise is assumed to be independent across data dimensions, and consequently the noise dependencies are ignored. In this paper we focus on the Gaussian process latent variable model (GPLVM), from which we develop an ex…
EPFL（洛桑联邦理工学院）；Technical University of Munich（慕尼黑工业大学）；Boğaziçi University（博阿齐奇大学）
Recent research has shown that it is possible to find interpretable directions in the latent spaces of pre-trained Generative Adversarial Networks (GANs). These directions enable controllable image generation and support a wide range of semantic editing operations, such as zoom or rotation. The discovery of such directions is often done in a supervised or semi-supervised manner and requires manual annotations which limits their use in practice. In comparison, unsupervised discovery allows finding subtle directions that are difficult to detect a priori. In this work, we propose a contrastive le…
Spotify（声田）；University College London（伦敦大学学院）；Babylon Health（巴比伦健康）
The discovery of causal relationships is a fundamental problem in science and medicine. In recent years, many elegant approaches to discovering causal relationships between two variables from observational data have been proposed. However, most of these deal only with purely directed causal relationships and cannot detect latent common causes. Here, we devise a general heuristic which takes a causal discovery algorithm that can only distinguish purely directed causal relations and modifies it to also detect latent common causes. We apply our method to two directed causal discovery algorithms, …
Multi-view Spectral Clustering (MvSC) attracts increasing attention due to diverse data sources. However, most existing works are prohibited in out-of-sample predictions and overlook model interpretability and exploration of clustering results. In this paper, a new method for MvSC is proposed via a shared latent space from the Restricted Kernel Machine framework. Through the lens of conjugate feature duality, we cast the weighted kernel principal component analysis problem for MvSC and develop a modified weighted conjugate feature duality to formulate dual variables. In our method, the dual va…
Mila - Québec AI Institute（米拉-魁北克人工智能研究所）；McGill University（麦吉尔大学）；ÉTS Montréal（蒙特利尔高等技术学院）
Learning predictors that do not rely on spurious correlations involves building causal representations. However, learning such a representation is very challenging. We, therefore, formulate the problem of learning a causal representation from high dimensional data and study causal recovery with synthetic data. This work introduces a latent variable decoder model, Decoder BCD, for Bayesian causal discovery and performs experiments in mildly supervised and unsupervised settings. We present a series of synthetic experiments to characterize important factors for causal discovery and show that usin…
Guangdong University of Technology（广东工业大学）；RIKEN（理化学研究所）
The prevalent fully-connected tensor network (FCTN) has achieved excellent success to compress data. However, the FCTN decomposition suffers from slow computational speed when facing higher-order and large-scale data. Naturally, there arises an interesting question: can a new model be proposed that decomposes the tensor into smaller ones and speeds up the computation of the algorithm? This work gives a positive answer by formulating a novel higher-order tensor decomposition model that utilizes latent matrices based on the tensor network structure, which can decompose a tensor into smaller-scal…
Causal processes in nature may contain cycles, and real datasets may violate causal sufficiency as well as contain selection bias. No constraint-based causal discovery algorithm can currently handle cycles, latent variables and selection bias (CLS) simultaneously. I therefore introduce an algorithm called Cyclic Causal Inference (CCI) that makes sound inferences with a conditional independence oracle under CLS, provided that we can represent the cyclic causal process as a non-recursive linear structural equation model with independent errors. Empirical results show that CCI outperforms CCD in …
TCS Research（塔塔咨询服务研究部）；Flytxt Mobile Solutions（Flytxt 移动解决方案公司）；Indian Institute of Space Science and Technology（印度空间科学技术研究所）
Several methods for discovering interpretable directions in the latent space of pre-trained GANs have been proposed. Latent semantics discovered by unsupervised methods are relatively less disentangled than supervised methods since they do not use pre-trained attribute classifiers. We propose Scale Ranking Estimator (SRE), which is trained using self-supervision. SRE enhances the disentanglement in directions obtained by existing unsupervised disentanglement techniques. These directions are updated to preserve the ordering of variation within each direction in latent space. Qualitative and qua…
We address the problem of latent truth discovery, LTD for short, where the goal is to discover the underlying true values of entity attributes in the presence of noisy, conflicting or incomplete information. Despite a multitude of algorithms to address the LTD problem that can be found in literature, only little is known about their overall performance with respect to effectiveness (in terms of truth discovery capabilities), efficiency and robustness. A practical LTD approach should satisfy all these characteristics so that it can be applied to heterogeneous datasets of varying quality and deg…
Guangdong University of Technology（广东工业大学）；RIKEN（理化学研究所）；Shiga University（滋贺大学）；Pazhou Lab（琶洲实验室）；Peking University（北京大学）；Okayama University（冈山大学）；Foshan University（佛山科学技术学院）
Discovering causal structures among latent factors from observed data is a particularly challenging problem. Despite some efforts for this problem, existing methods focus on the single-domain data only. In this paper, we propose Multi-Domain Linear Non-Gaussian Acyclic Models for Latent Factors (MD-LiNA), where the causal structure among latent factors of interest is shared for all domains, and we provide its identification results. The model enriches the causal representation for multi-domain data. We propose an integrated two-phase algorithm to estimate the model. In particular, we first loc…
Latent variable discovery is a central problem in data analysis with a broad range of applications in applied science. In this work, we consider data given as an invertible mixture of two statistically independent components and assume that one of the components is observed while the other is hidden. Our goal is to recover the hidden component. For this purpose, we propose an autoencoder equipped with a discriminator. Unlike the standard nonlinear ICA problem, which was shown to be non-identifiable, in the special case of ICA we consider here, we show that our approach can recover the componen…
We tackle the problem of learning a rotation invariant latent factor model when the training data is comprised of lower-dimensional projections of the original feature space. The main goal is the discovery of a set of 3-D bases poses that can characterize the manifold of primitive human motions, or movemes, from a training set of 2-D projected poses obtained from still images taken at various camera angles. The proposed technique for basis discovery is data-driven rather than hand-designed. The learned representation is rotation invariant, and can reconstruct any training instance from multipl…
University of Minnesota（明尼苏达大学）；IQVIA（艾昆纬）；University of Virginia（弗吉尼亚大学）；Temple University（天普大学）；University of Illinois Urbana-Champaign（伊利诺伊大学厄巴纳-香槟分校）
Accurate prediction of the transmission of epidemic diseases such as COVID-19 is crucial for implementing effective mitigation measures. In this work, we develop a tensor method to predict the evolution of epidemic trends for many regions simultaneously. We construct a 3-way spatio-temporal tensor (location, attribute, time) of case counts and propose a nonnegative tensor factorization with latent epidemiological model regularization named STELAR. Unlike standard tensor factorization methods which cannot predict slabs ahead, STELAR enables long-term prediction by incorporating latent temporal …
Causal Discovery with Latent Confounders Based on Higher-Order Cumulants
Guangdong University of Technology（广东工业大学）；Peng Cheng Laboratory（鹏城实验室）；Shantou University（汕头大学）；Carnegie Mellon University（卡内基梅隆大学）；Mohamed bin Zayed University of Artificial Intelligence（穆罕默德·本·扎耶德人工智能大学）
Reconstructing the causal relationships behind the phenomena we observe is a fundamental challenge in all areas of science. Discovering causal relationships through experiments is often infeasible, unethical, or expensive in complex systems. However, increases in computational power allow us to process the ever-growing amount of data that modern science generates, leading to an emerging interest in the causal discovery problem from observational data. This work evaluates the LPCMCI algorithm, which aims to find generators compatible with a multi-dimensional, highly autocorrelated time series w…
LUMLIS (Lisbon ELLIS Unit)（里斯本ELLIS单元LUMLIS）；Instituto de Telecomunicações（电信研究所）；Unbabel（Unbabel公司）
Recent work has shown promising results in causal discovery by leveraging interventional data with gradient-based methods, even when the intervened variables are unknown. However, previous work assumes that the correspondence between samples and interventions is known, which is often unrealistic. We envision a scenario with an extensive dataset sampled from multiple intervention distributions and one observation distribution, but where we do not know which distribution originated each sample and how the intervention affected the system, \textit{i.e.}, interventions are entirely latent. We prop…
Saitama Institute of Technology（埼玉工业大学）；RIKEN Center for Advanced Intelligence Project (AIP)（理化学研究所先进智能项目中心）；Imperial College London（帝国理工学院）；Hangzhou Dianzi University（杭州电子科技大学）；Guangdong University of Technology（广东工业大学）
In tensor completion tasks, the traditional low-rank tensor decomposition models suffer from the laborious model selection problem due to their high model sensitivity. In particular, for tensor ring (TR) decomposition, the number of model possibilities grows exponentially with the tensor order, which makes it rather challenging to find the optimal TR decomposition. In this paper, by exploiting the low-rank structure of the TR latent space, we propose a novel tensor completion method which is robust to model selection. In contrast to imposing the low-rank constraint on the data space, we introd…
Generating Counterfactual Trajectories with Latent Diffusion Models for Concept Discovery
Rheinland-Pfälzische Technische Universität Kaiserslautern-Landau（莱茵兰-普法尔茨州 Kaiserslautern-Landau 技术大学）；German Research Center for Artificial Intelligence GmbH (DFKI)（德国人工智能研究中心 GmbH（DFKI））
Discovering the latent structure from many observed variables is an important yet challenging learning task. Existing approaches for discovering latent structures often require the unknown number of hidden states as an input. In this paper, we propose a quartet based approach which is \emph{agnostic} to this number. The key contribution is a novel rank characterization of the tensor associated with the marginal distribution of a quartet. This characterization allows us to design a \emph{nuclear norm} based test for resolving quartet relations. We then use the quartet test as a subroutine in a …
Yandex（扬德克斯）；National Research University Higher School of Economics（国立研究型大学高等经济学院）
The latent spaces of GAN models often have semantically meaningful directions. Moving in these directions corresponds to human-interpretable image transformations, such as zooming or recoloring, enabling a more controllable generation process. However, the discovery of such directions is currently performed in a supervised manner, requiring human labels, pretrained models, or some form of self-supervision. These requirements severely restrict a range of directions existing approaches can discover. In this paper, we introduce an unsupervised method to identify interpretable directions in the la…
Informatics Institute（信息学研究所）；University of Amsterdam（阿姆斯特丹大学）
We address the problem of causal discovery from data, making use of the recently proposed causal modeling framework of modular structural causal models (mSCM) to handle cycles, latent confounders and non-linearities. We introduce σ-connection graphs (σ-CG), a new class of mixed graphs (containing undirected, bidirected and directed edges) with additional structure, and extend the concept of σ-separation, the appropriate generalization of the well-known notion of d-separation in this setting, to apply to σ-CGs. We prove the closedness of σ-separation under marginalisation and conditioning and e…
RWTH Aachen University（亚琛工业大学）；INRIA（法国国家信息与自动化研究所）；CEA（法国原子能和替代能源委员会）；Department of Psychiatry and Psychotherapy（精神病学与心理治疗系）
High-quality data accumulation is now becoming ubiquitous in the health domain. There is increasing opportunity to exploit rich data from normal subjects to improve supervised estimators in specific diseases with notorious data scarcity. We demonstrate that low-dimensional embedding spaces can be derived from the UK Biobank population dataset and used to enhance data-scarce prediction of health indicators, lifestyle and demographic characteristics. Phenotype predictions facilitated by Variational Autoencoder manifolds typically scaled better with increasing unlabeled data than dimensionality r…
University of Virginia（弗吉尼亚大学）；University of Minnesota（明尼苏达大学）；Amazon（亚马逊）
Learning generative probabilistic models is a core problem in machine learning, which presents significant challenges due to the curse of dimensionality. This paper proposes a joint dimensionality reduction and non-parametric density estimation framework, using a novel estimator that can explicitly capture the underlying distribution of appropriate reduced-dimension representations of the input data. The idea is to jointly design a nonlinear dimensionality reducing auto-encoder to model the training data in terms of a parsimonious set of latent random variables, and learn a canonical low-rank …
