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arXiv 1105.1004physics.bio-phq-bio.SC
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微管的生长和缩短:两态模型方法

Growth and shortening of microtubules: a two-state model approach

Yunxin Zhang

摘要:

本文提出了一个描述细胞中微管动态不稳定性的双态力学化学模型。MT在两种状态之间切换,组装状态和拆卸状态。在组装状态下,微管的生长包括两个过程:自由的GTP-微管蛋白结合到原丝(PF)的顶端和PF的构象变化,在此过程中,第一个向外卷曲的微管蛋白单元利用倒数第二个微管蛋白单元中GTP水解释放的能量重新排列到MT表面。在解装配状态下,微管的缩短也包括两个过程,即微管蛋白的释放和微管蛋白的卷曲。这两种状态之间的转换,通常被称为救援和灾难,随机发生的外力依赖率。通过对实验数据拟合得到了MT生长的两态模型参数,得到了MT生长的详细特性,发现MT主要处于组装状态,其平均生长速度随外力和GTP-微管蛋白浓度的增加而增加,在没有外力的情况下,MT的平均生长速度会缩短。为了更好地了解MT生长的外力和GTP-微管蛋白浓度依赖性,并为以后的实验验证这一双态模型,定义了11个{ \it临界力},并进行了数值讨论.

英文摘要:

In this study, a two-state mechanochemical model is presented to describe the dynamic instability of microtubules (MTs) in cells. The MTs switches between two states, assembly state and disassembly state. In assembly state, the growth of MTs includes two processes: free GTP-tubulin binding to the tip of protofilament (PF) and conformation change of PF, during which the first tubulin unit which curls outwards is rearranged into MT surface using the energy released from the hydrolysis of GTP in the penultimate tubulin unit. In disassembly state, the shortening of MTs includes also two processes, the release of GDP-tibulin from the tip of PF and one new tubulin unit curls out of the MT surface. Switches between these two states, which are usually called rescue and catastrophe, happen stochastically with external force dependent rates. Using this two-state model with parameters obtained by fitting the recent experimental data, detailed properties of MT growth are obtained, we find that MT is mainly in assembly state, its mean growth velocity increases with external force and GTP-tubulin concentration, MT will shorten in average without external force. To know more about the external force and GTP-tubulin concentration dependent properties of MT growth, and for the sake of the future experimental verification of this two-state model, eleven {\it critical forces} are defined and numerically discussed.

机构、总结、中文摘要均由AI分析而来,可能存在错误,请以论文正文为准。

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