We use the concept of the network communicability (Phys. Rev. E 77 (2008) 036111) to define communities in a complex network. The communities are defined as the cliques of a communicability graph, which has the same set of nodes as the complex network and links determined by the communicability function. Then, the problem of finding the network communities is transformed to an all-clique problem of the communicability graph. We discuss the efficiency of this algorithm of community detection. In addition, we extend here the concept of the communicability to account for the strength of the interactions between the nodes by using the concept of inverse temperature of the network. Finally, we develop an algorithm to manage the different degrees of overlapping between the communities in a complex network. We then analyze the USA airport network, for which we successfully detect two big communities of the eastern airports and of the western/central airports as well as two bridging central communities. In striking contrast, a well-known algorithm groups all but two of the continental airports into one community.
In this paper, we investigate the mesoscale structure of the World Trade Network. In this framework, a specific role is assumed by short and long-range interactions, and hence by the distance, between countries. Therefore, we identify clusters through a new procedure that exploits Estrada communicability distance and the vibrational communicability distance, which turn out to be particularly suitable for catching the inner structure of the economic network. The proposed methodology aims at finding the distance threshold that maximizes a specific modularity function defined for general metric s…
We here present a method of clearly identifying multi-partite subgraphs in a network. The method is based on a recently introduced concept of the communicability, which very clearly identifies communities in a complex network. We here show that, while the communicability at a positive temperature is useful in identifying communities, the communicability at a negative temperature is useful in idenfitying multi-partitite subgraphs; the latter quantity between two nodes is positive when the two nodes belong to the same subgraph and is negative when not. The method is able to discover `almost' mul…
The concept of communicability is introduced for complex socio-economic networks. The communicability function expresses how an impact propagates from one place to another in the network. This function is used to define unambiguously the concept of socio-economic community. The concept of temperature in complex socio-economic networks is also introduced as a way of accounting for the external stresses to which such systems are submitted. This external stress can change dramatically the structure of the communities in a network. We analyze here a trade network of countries exporting 'miscellane…
A fundamental problem in the study of complex networks is to provide quantitative measures of correlation and information flow between different parts of a system. To this end, several notions of communicability have been introduced and applied to a wide variety of real-world networks in recent years. Several such communicability functions are reviewed in this paper. It is emphasized that communication and correlation in networks can take place through many more routes than the shortest paths, a fact that may not have been sufficiently appreciated in previously proposed correlation measures. I…
We introduce the concept of communicability angle between a pair of nodes in a graph. We provide strong analytical and empirical evidence that the average communicability angle for a given network accounts for its spatial efficiency on the basis of the communications among the nodes in a network. We determine characteristics of the spatial efficiency of more than a hundred real-world complex networks that represent complex systems arising in a diverse set of scenarios. In particular, we find that the communicability angle correlates very well with the experimentally measured value of the relat…
Betweenness measures provide quantitative tools to pick out fine details from the massive amount of interaction data that is available from large complex networks. They allow us to study the extent to which a node takes part when information is passed around the network. Nodes with high betweenness may be regarded as key players that have a highly active role. At one extreme, betweenness has been defined by considering information passing only through the shortest paths between pairs of nodes. At the other extreme, an alternative type of betweenness has been defined by considering all possible…
We propose a communication-driven mechanism for predicting triadic closure in complex networks. It is mathematically formulated on the basis of communicability distance functions that account for the quality of communication between nodes in the network. We study $25$ real-world networks and show that the proposed method predicts correctly $20\%$ of triadic closures in these networks, in contrast to the $7.6\%$ predicted by a random mechanism. We also show that the communication-driven method outperforms the random mechanism in explaining the clustering coefficient, average path length, and av…
We analyse the flow of information in multiplex networks by means of the communicability function. First, we generalize this measure from its definition from simple graphs to multiplex networks. Then, we study its relevance for the analysis of real-world systems by studying a social multiplex where information flows using formal/informal channels and an air transportation system where the layers represent different air companies. Accordingly, the communicability, which is essential for the good performance of these complex systems, emerges at a systemic operation point in the multiplex where t…
One of the defining representations of women from medieval times is in the role of peace-weaver, that is, a woman was expected to 'weave' peace between warring men. The underlying assumption in scholarship on this topic is that female mediation lessens male violence. This stance can however be questioned since it may be the result of gender-based peace and diplomacy models that relegate women's roles to that of conduits between men. By analyzing the concept of communicability and relevance of certain nodes in complex networks we show how our sources afford women more complex and nuanced social…
We analyze a recently proposed temporal centrality measure applied to an empirical network based on person-to-person contacts in an emergency department of a busy urban hospital. We show that temporal centrality identifies a distinct set of top-spreaders than centrality based on the time-aggregated binarized contact matrix, so that taken together, the accuracy of capturing top-spreaders improves significantly. However, with respect to predicting epidemic outcome, the temporal measure does not necessarily outperform less complex measures. Our results also show that other temporal markers such a…
Complex networks are the representative graphs of interactions in many complex systems. Usually, these interactions are abstractions of the communication/diffusion channels between the units of the system. Real complex networks, e.g. traffic networks, reveal different operation phases governed by the dynamical stress of the system. Here we show how, communicability, a topological descriptor that reveals the efficiency of the network functionality in terms of these diffusive paths, could be used to reveal the transitions mentioned. By considering a vibrational model of nodes and edges in a grap…
A complex network is a condensed representation of the relational topological framework of a complex system. A main reason for the existence of such networks is the transmission of items through the entities of these complex systems. Here, we consider a communicability function that accounts for the routes through which items flow on networks. Such a function induces a natural embedding of a network in a Euclidean high-dimensional sphere. We use one of the geometric parameters of this embedding, namely the angle between the position vectors of the nodes in the hyperspheres, to extract structur…
Complex networks usually exhibit a rich architecture organized over multiple intertwined scales. Information pathways are expected to pervade these scales reflecting structural insights that are not manifest from analyses of the network topology. Moreover, small-world effects correlate with the different network hierarchies complicating the identification of coexisting mesoscopic structures and functional cores. We present a communicability analysis of effective information pathways throughout complex networks based on information diffusion to shed further light on these issues. We employ a va…
A book Chapter consisting of some of the main areas of research in graph theory applied to physics. It includes graphs in condensed matter theory, such as the tight-binding and the Hubbard model. It follows the study of graph theory and statistical physics by means of the analysis of the Potts model. Then, we consider the use of graph polynomials in solving Feynman integrals, graphs and electrical networks, vibrational analysis in networked systems and random graphs. The second part deals with the study of complex networks and includes the models of "small-world", "scale-freeness", network mot…
The characterization of network community structure has profound implications in several scientific areas. Therefore, testing the algorithms developed to establish the optimal division of a network into communities is a fundamental problem in the field. We performed here a highly detailed evaluation of community detection algorithms, which has two main novelties: 1) using complex closed benchmarks, which provide precise ways to assess whether the solutions generated by the algorithms are optimal; and, 2) A novel type of analysis, based on hierarchically clustering the solutions suggested by mu…
How to determine the community structure of complex networks is an open question. It is critical to establish the best strategies for community detection in networks of unknown structure. Here, using standard synthetic benchmarks, we show that none of the algorithms hitherto developed for community structure characterization perform optimally. Significantly, evaluating the results according to their modularity, the most popular measure of the quality of a partition, systematically provides mistaken solutions. However, a novel quality function, called Surprise, can be used to elucidate which is…
Graph theory constitutes a widely used and established field providing powerful tools for the characterization of complex networks. The intricate topology of networks can also be investigated by means of the collective dynamics observed in the interactions of self-sustained oscillations (synchronization patterns) or propagation-like processes such as random walks. However, networks are often inferred from real data forming dynamic systems, which are different from those employed to reveal their topological characteristics. This stresses the necessity for a theoretical framework dedicated to th…
Determining community structure is a central topic in the study of complex networks, be it technological, social, biological or chemical, in static or interacting systems. In this paper, we extend the concept of community detection from classical to quantum systems---a crucial missing component of a theory of complex networks based on quantum mechanics. We demonstrate that certain quantum mechanical effects cannot be captured using current classical complex network tools and provide new methods that overcome these problems. Our approaches are based on defining closeness measures between nodes,…
Hundreds of years after its creation, the game of chess is still widely played worldwide. Opening Theory is one of the pillars of chess and requires years of study to be mastered. Here we exploit the "wisdom of the crowd" in an online chess platform to answer questions that, traditionally, only chess experts could tackle. We first define the relatedness network of chess openings that quantifies how similar two openings are to play. In this network, we spot communities of nodes corresponding to the most common opening choices and their mutual relationships, information which is hard to obtain f…
We present a new layout algorithm for complex networks that combines a multi-scale approach for community detection with a standard force-directed design. Since community detection is computationally cheap, we can exploit the multi-scale approach to generate network configurations with close-to-minimal energy very fast. As a further asset, we can use the knowledge of the community structure to facilitate the interpretation of large networks, for example the network defined by protein-protein interactions.
We show that the community structure of a network can be used as a coarse version of its embedding in a hidden space with hyperbolic geometry. The finding emerges from a systematic analysis of several real-world and synthetic networks. We take advantage of the analogy for reinterpreting results originally obtained through network hyperbolic embedding in terms of community structure only. First, we show that the robustness of a multiplex network can be controlled by tuning the correlation between the community structures across different layers. Second, we deploy an efficient greedy protocol fo…
Community structure analysis is a powerful tool for complex networks, which can simplify their functional analysis considerably. Recently, many approaches were proposed to community structure detection, but few works were focused on the significance of community structure. Since real networks obtained from complex systems always contain error links, and most of the community detection algorithms have random factors, evaluate the significance of community structure is important and urgent. In this paper, we use the eigenvectors' stability to characterize the significance of community structures…
University of Houston（休斯顿大学）；Texas Center for Superconductivity, University of Houston（休斯顿大学德克萨斯超导中心）
We introduce an ensemble learning scheme for community detection in complex networks. The scheme uses a Machine Learning algorithmic paradigm we call Extremal Ensemble Learning. It uses iterative extremal updating of an ensemble of network partitions, which can be found by a conventional base algorithm, to find a node partition that maximizes modularity. At each iteration, core groups of nodes that are in the same community in every ensemble partition are identified and used to form a reduced network. Partitions of the reduced network are then found and used to update the ensemble. The smaller…
Community structure is one of the most relevant features encountered in numerous real-world applications of networked systems. Despite the tremendous effort of scientists working on this subject over the past few decades to characterize, model, and analyze communities, more investigations are needed to better understand the impact of community structure and its dynamics on networked systems. Here, we first focus on generative models of communities in complex networks and their role in developing strong foundation for community detection algorithms. We discuss modularity and the use of modulari…
Constrained clustering has been well-studied in the unsupervised learning society. However, how to encode constraints into community structure detection, within complex networks, remains a challenging problem. In this paper, we propose a semi-supervised learning framework for community structure detection. This framework implicitly encodes the must-link and cannot-link constraints by modifying the adjacency matrix of network, which can also be regarded as de-noising the consensus matrix of community structures. Our proposed method gives consideration to both the topology and the functions (bac…
Detection of overlapping communities in complex networks has motivated recent research in the relevant fields. Aiming this problem, we propose a Markov dynamics based algorithm, called UEOC, which means, 'unfold and extract overlapping communities'. In UEOC, when identifying each natural community that overlaps, a Markov random walk method combined with a constraint strategy, which is based on the corresponding annealed network (degree conserving random network), is performed to unfold the community. Then, a cutoff criterion with the aid of a local community function, called conductance, which…
Nowadays, identification and detection community structures in complex networks is an important factor in extracting useful information from networks. Label propagation algorithm with near linear-time complexity is one of the most popular methods for detecting community structures, yet its uncertainty and randomness is a defective factor. Merging LPA with other community detection metrics would improve its accuracy and reduce instability of LPA. Considering this point, in this paper we tried to use edge betweenness centrality to improve LPA performance. On the other hand, calculating edge betw…
Discovering overlapping community structures is a crucial step to understanding the structure and dynamics of many networks. In this paper we develop a symmetric binary matrix factorization model (SBMF) to identify overlapping communities. Our model allows us not only to assign community memberships explicitly to nodes, but also to distinguish outliers from overlapping nodes. In addition, we propose a modified partition density to evaluate the quality of community structures. We use this to determine the most appropriate number of communities. We evaluate our methods using both synthetic bench…
In this work, we analyse and predict the stability of communities in complex networks. We use a variant of closeness centrality, known as profile closeness, to measure the loyalty of a member towards its community. We show that the profile closeness is an adequate indicator of how communities evolve in a network. We investigate this in static as well as dynamic (temporal) networks and establish the relevance of profile closeness in predicting the evolution of a complex network. Keywords: Small world networks , Centrality , Community , Closeness , Clustering
In this note we briefly study the feasibility of community detection in complex networks using peripheral vertices. Our method suggests a novel direction in axiomizing the problem of clustering in graphs and complex networks by looking at the topological role each vertex plays in the community structure, regardless of the attributes. The promising strength of pseudo-peripheral vertices as a lever for analysis of complex networks is also demonstrated on real-world data.
The "clumpiness" matrix of a network is used to develop a method to identify its community structure. A "projection space" is constructed from the eigenvectors of the clumpiness matrix and a border line is defined using some kind of angular distance in this space. The community structure of the network is identified using this borderline and/or hierarchical clustering methods. The performance of our algorithm is tested on some computer-generated and real-world networks. The accuracy of the results is checked using normalized mutual information. The effect of community size heterogeneity on the…
We have found that known community identification algorithms produce inconsistent communities when the node ordering changes at input. We propose two metrics to quantify the level of consistency across multiple runs of an algorithm: pairwise membership probability and consistency. Based on these two metrics, we address the consistency problem without compromising the modularity. Our solution uses pairwise membership probabilities as link weights and generates consistent communities within six or fewer cycles. It offers a new tool in the study of community structures and their evolutions.
Community detection in complex networks is a topic of considerable recent interest within the scientific community. For dealing with the problem that genetic algorithm are hardly applied to community detection, we propose a genetic algorithm with ensemble learning (GAEL) for detecting community structure in complex networks. GAEL replaces its traditional crossover operator with a multi-individual crossover operator based on ensemble learning. Therefore, GAEL can avoid the problems that are brought by traditional crossover operator which is only able to mix string blocks of different individual…
The notion of complex-valued information entropy measure is presented. It applies in particular to directed networks (digraphs). The corresponding statistical physics notions are outlined. The studied network, serving as a case study, in view of illustrating the discussion, concerns citations by agents belonging to two distinct communities which have markedly different opinions: the Neocreationist and Intelligent Design Proponents, on one hand, and the Darwinian Evolution Defenders, on the other hand. The whole, intra- and inter-community adjacency matrices, resulting from quotations of publis…
Many real-world networks display a community structure. We study two random graph models that create a network with similar community structure as a given network. One model preserves the exact community structure of the original network, while the other model only preserves the set of communities and the vertex degrees. These models show that community structure is an important determinant of the behavior of percolation processes on networks, such as information diffusion or virus spreading: the community structure can both \textit{enforce} as well as \textit{inhibit} diffusion processes. Our…
Recognizing number of communities and detecting community structures of complex network are discussed in this paper. As a visual and feasible algorithm, block model has been successfully applied to detect community structures in complex network. In order to measure the quality of the block model, we first define an objective function WQ value. For obtaining block model B of a network, GSA algorithm is applied to optimize WQ with the help of random keys. After executing processes AO (Adding Ones) and RO (Removing Ones) on block model B, the number of communities of a network can be recognized d…
Community detection and link prediction are both of great significance in network analysis, which provide very valuable insights into topological structures of the network from different perspectives. In this paper, we propose a novel community detection algorithm with inclusion of link prediction, motivated by the question whether link prediction can be devoted to improving the accuracy of community partition. For link prediction, we propose two novel indices to compute the similarity between each pair of nodes, one of which aims to add missing links, and the other tries to remove spurious ed…
The theory of community structure is a powerful tool for real networks, which can simplify their topological and functional analysis considerably. However, since community detection methods have random factors and real social networks obtained from complex systems always contain error edges, evaluating the robustness of community structure is an urgent and important task. In this letter, we employ the critical threshold of resolution parameter in Hamiltonian function, $γ_C$, to measure the robustness of a network. According to spectral theory, a rigorous proof shows that the index we proposed …
As two main focuses of the study of complex networks, the community structure and the dynamics on networks have both attracted much attention in various scientific fields. However, it is still an open question how the community structure is associated with the dynamics on complex networks. In this paper, through investigating the diffusion process taking place on networks, we demonstrate that the intrinsic community structure of networks can be revealed by the stable local equilibrium states of the diffusion process. Furthermore, we show that such community structure can be directly identified…
In this paper, we introduce a new algorithm allowing for generation of networks with heterogeneity of both node degrees and community sizes. The quality and efficiency of the algorithm is analyzed and compared to the other, so far the most popular algorithm which was proposed by Lancichinetti et al. We discuss the advantages and shortcomings of both algorithms indicating the areas of their potential application.
Community structure is one of the key properties of complex networks and plays a crucial role in their topology and function. While an impressive amount of work has been done on the issue of community detection, very little attention has been so far devoted to the investigation of communities in real networks. We present a systematic empirical analysis of the statistical properties of communities in large information, communication, technological, biological, and social networks. We find that the mesoscopic organization of networks of the same category is remarkably similar. This is reflected …
We propose a new local community detection algorithm that finds communities by identifying borderlines between them using boundary nodes. Our method performs label propagation for community detection, where nodes decide their labels based on the largest "benefit score" exhibited by their immediate neighbors as an attractor to their communities. We try different metrics and find that using the number of common neighbors as benefit scores leads to better decisions for community structure. The proposed algorithm has a local approach and focuses only on boundary nodes during iterations of label pr…
Clustering, assortativity, and communities are key features of complex networks. We probe dependencies between these attributes and find that ensembles with strong clustering display both high assortativity by degree and prominent community structure, while ensembles with high assortativity are much less biased towards clustering or community structure. Further, clustered networks can amplify small homophilic bias for trait assortativity. This marked asymmetry suggests that transitivity, rather than homophily, drives the standard nonsocial/social network dichotomy.
The past decade has seen tremendous growth in the field of Complex Social Networks. Several network generation models have been extensively studied to develop an understanding of how real world networks evolve over time. Two important applications of these models are to study the evolution dynamics and processes that shape a network, and to generate benchmark networks with known community structures. Research has been conducted in both these directions, relatively independent of the other. This creates a disjunct between real world networks and the networks generated as benchmarks to study com…
Community detection emerges as an important task in the discovery of network mesoscopic structures. However, the concept of a "good" community is very context-dependent and it is relatively complicated to deduce community characteristics using available community detection techniques. In reality, the existence of a gap between structural goodness quality metrics and expected topological patterns creates a confusion in evaluating community structures. In this paper, we introduce an empirical multivariate analysis of different structural goodness properties in order to characterize several detec…
How does network structure affect diffusion? Recent studies suggest that the answer depends on the type of contagion. Complex contagions, unlike infectious diseases (simple contagions), are affected by social reinforcement and homophily. Hence, the spread within highly clustered communities is enhanced, while diffusion across communities is hampered. A common hypothesis is that memes and behaviors are complex contagions. We show that, while most memes indeed behave like complex contagions, a few viral memes spread across many communities, like diseases. We demonstrate that the future popularit…
Due to notable discoveries in the fast evolving field of complex networks, recent research in software engineering has also focused on representing software systems with networks. Previous work has observed that these networks follow scale-free degree distributions and reveal small-world phenomena, while we here explore another property commonly found in different complex networks, i.e. community structure. We adopt class dependency networks, where nodes represent software classes and edges represent dependencies among them, and show that these networks reveal a significant community structure…
