Principal component analysis (PCA) is a standard tool for dimensional reduction of a set of $n$ observations (samples), each with $p$ variables. In this paper, using a matrix perturbation approach, we study the nonasymptotic relation between the eigenvalues and eigenvectors of PCA computed on a finite sample of size $n$, and those of the limiting population PCA as $n\to\infty$. As in machine learning, we present a finite sample theorem which holds with high probability for the closeness between the leading eigenvalue and eigenvector of sample PCA and population PCA under a spiked covariance model. In addition, we also consider the relation between finite sample PCA and the asymptotic results in the joint limit $p,n\to\infty$, with $p/n=c$. We present a matrix perturbation view of the "phase transition phenomenon," and a simple linear-algebra based derivation of the eigenvalue and eigenvector overlap in this asymptotic limit. Moreover, our analysis also applies for finite $p,n$ where we show that although there is no sharp phase transition as in the infinite case, either as a function of noise level or as a function of sample size $n$, the eigenvector of sample PCA may exhibit a sharp "loss of tracking," suddenly losing its relation to the (true) eigenvector of the population PCA matrix. This occurs due to a crossover between the eigenvalue due to the signal and the largest eigenvalue due to noise, whose eigenvector points in a random direction.
Based on some new robust estimators of the covariance matrix, we propose stable versions of Principal Component Analysis (PCA) and we qualify it independently of the dimension of the ambient space. We first provide a robust estimator of the orthogonal projector on the largest eigenvectors of the covariance matrix. The behavior of such an estimator is related to the size of the gap in the spectrum of the covariance matrix and in particular a large gap is needed in order to get a good approximation. To avoid the assumption of a large eigengap in the spectrum of the covariance matrix we propose a…
We establish non-asymptotic lower bounds for the estimation of principal subspaces. As applications, we obtain new results for the excess risk of principal component analysis and the matrix denoising problem.
This paper deals with the estimation of a high-dimensional covariance with a conditional sparsity structure and fast-diverging eigenvalues. By assuming sparse error covariance matrix in an approximate factor model, we allow for the presence of some cross-sectional correlation even after taking out common but unobservable factors. We introduce the Principal Orthogonal complEment Thresholding (POET) method to explore such an approximate factor structure with sparsity. The POET estimator includes the sample covariance matrix, the factor-based covariance matrix (Fan, Fan, and Lv, 2008), the thresh…
In this paper we analyze different ways of performing principal component analysis throughout three different approaches: robust covariance and correlation matrix estimation, projection pursuit approach and non-parametric maximum entropy algorithm. The objective of these approaches is the correction of the well known sensitivity to outliers of the classical method for principal component analysis. Due to their robustness, they perform very well in contaminated data, while the classical approach fails to preserve the characteristics of the core information.
Principal component analysis is a multivariate statistical method frequently used in science and engineering to reduce the dimension of a problem or extract the most significant features from a dataset. In this paper, using a similar notion to the quantum counting, we show how to apply the amplitude amplification together with the phase estimation algorithm to an operator in order to procure the eigenvectors of the operator associated to the eigenvalues defined in the range $\left[a, b\right]$, where $a$ and $b$ are real and $0 \leq a \leq b \leq 1$. This makes possible to obtain a combination…
Which components of the singular value decomposition of a signal-plus-noise data matrix are most informative for the inferential task of detecting or estimating an embedded low-rank signal matrix? Principal component analysis ascribes greater importance to the components that capture the greatest variation, i.e., the singular vectors associated with the largest singular values. This choice is often justified by invoking the Eckart-Young theorem even though that work addresses the problem of how to best represent a signal-plus-noise matrix using a low-rank approximation and not how to best_infe…
We examine the problem of approximating a positive, semidefinite matrix $Σ$ by a dyad $xx^T$, with a penalty on the cardinality of the vector $x$. This problem arises in sparse principal component analysis, where a decomposition of $Σ$ involving sparse factors is sought. We express this hard, combinatorial problem as a maximum eigenvalue problem, in which we seek to maximize, over a box, the largest eigenvalue of a symmetric matrix that is linear in the variables. This representation allows to use the techniques of robust optimization, to derive a bound based on semidefinite programming. The q…
Matrix completion constantly receives tremendous attention from many research fields. It is commonly applied for recommender systems such as movie ratings, computer vision such as image reconstruction or completion, multi-task learning such as collaboratively modeling time-series trends of multiple sensors, and many other applications. Matrix completion techniques are usually computationally exhaustive and/or fail to capture the heterogeneity in the data. For example, images usually contain a heterogeneous set of objects, and thus it is a challenging task to reconstruct images with high levels…
This paper studies the Schatten-$q$ error of low-rank matrix estimation by singular value decomposition under perturbation. We specifically establish a perturbation bound on the low-rank matrix estimation via a perturbation projection error bound. Then, we establish lower bounds to justify the tightness of the upper bound on the low-rank matrix estimation error. We further develop a user-friendly sin$Θ$ bound for singular subspace perturbation based on the matrix perturbation projection error bound. Finally, we demonstrate the advantage of our results over the ones in the literature by simulat…
Johns Hopkins University（约翰霍普金斯大学）；Fujitsu Laboratories of America（富士通美国研究院）
We study private matrix analysis in the sliding window model where only the last $W$ updates to matrices are considered useful for analysis. We give first efficient $o(W)$ space differentially private algorithms for spectral approximation, principal component analysis, and linear regression. We also initiate and show efficient differentially private algorithms for two important variants of principal component analysis: sparse principal component analysis and non-negative principal component analysis. Prior to our work, no such result was known for sparse and non-negative differentially private…
In this paper the exact linear relation between the leading eigenvectors of the modularity matrix and the singular vectors of an uncentered data matrix is developed. Based on this analysis the concept of a modularity component is defined, and its properties are developed. It is shown that modularity component analysis can be used to cluster data similar to how traditional principal component analysis is used except that modularity component analysis does not require data centering.
Highly robust factored principal component analysis for matrix-valued outlier accommodation and explainable detection via matrix minimum covariance determinant
National University of Singapore（新加坡国立大学）；Academy of Mathematics and Systems Science, Chinese Academy of Sciences（中国科学院数学与系统科学研究院）；Tencent（腾讯）
In this paper, we study the problem of principal component analysis with generative modeling assumptions, adopting a general model for the observed matrix that encompasses notable special cases, including spiked matrix recovery and phase retrieval. The key assumption is that the underlying signal lies near the range of an $L$-Lipschitz continuous generative model with bounded $k$-dimensional inputs. We propose a quadratic estimator, and show that it enjoys a statistical rate of order $\sqrt{\frac{k\log L}{m}}$, where $m$ is the number of samples. We also provide a near-matching algorithm-indep…
We consider the problem of decomposing a large covariance matrix into the sum of a low-rank matrix and a diagonally dominant matrix, and we call this problem the "Diagonally-Dominant Principal Component Analysis (DD-PCA)". DD-PCA is an effective tool for designing statistical methods for strongly correlated data. We showcase the use of DD-PCA in two statistical problems: covariance matrix estimation, and global detection in multiple testing. Using the output of DD-PCA, we propose a new estimator for estimating a large covariance matrix with factor structure. Thanks to a nice property of diagon…
Outliers contaminating data sets are a challenge to statistical estimators. Even a small fraction of outlying observations can heavily influence most classical statistical methods. In this paper we propose generalized spherical principal component analysis, a new robust version of principal component analysis that is based on the generalized spatial sign covariance matrix. Supporting theoretical properties of the proposed method including influence functions, breakdown values and asymptotic efficiencies are studied, and a simulation study is conducted to compare our new method to existing meth…
Principal components analysis (PCA) is a widely used dimension reduction technique with an extensive range of applications. In this paper, an online distributed algorithm is proposed for recovering the principal eigenspaces. We further establish its rate of convergence and show how it relates to the number of nodes employed in the distributed computation, the effective rank of the data matrix under consideration, and the gap in the spectrum of the underlying population covariance matrix. The proposed algorithm is illustrated on low-rank approximation and $\boldsymbol{k}$-means clustering tasks…
Stanford University（斯坦福大学）；MIT（麻省理工学院）；Microsoft Research, New England（新英格兰微软研究院）
We show how to efficiently project a vector onto the top principal components of a matrix, without explicitly computing these components. Specifically, we introduce an iterative algorithm that provably computes the projection using few calls to any black-box routine for ridge regression. By avoiding explicit principal component analysis (PCA), our algorithm is the first with no runtime dependence on the number of top principal components. We show that it can be used to give a fast iterative method for the popular principal component regression problem, giving the first major runtime improvemen…
Instituto de Física Teórica, UAM/CSIC（UAM/CSIC理论物理研究所）；Universidad Autónoma de Madrid（马德里自治大学）；Los Alamos National Laboratory（洛斯阿拉莫斯国家实验室）；Quantum Science Center（量子科学中心）
Principal component analysis (PCA) is a dimensionality reduction method in data analysis that involves diagonalizing the covariance matrix of the dataset. Recently, quantum algorithms have been formulated for PCA based on diagonalizing a density matrix. These algorithms assume that the covariance matrix can be encoded in a density matrix, but a concrete protocol for this encoding has been lacking. Our work aims to address this gap. Assuming amplitude encoding of the data, with the data given by the ensemble $\{p_i,| ψ_i \rangle\}$, then one can easily prepare the ensemble average density matri…
Principal component analysis (PCA) requires the computation of a low-rank approximation to a matrix containing the data being analyzed. In many applications of PCA, the best possible accuracy of any rank-deficient approximation is at most a few digits (measured in the spectral norm, relative to the spectral norm of the matrix being approximated). In such circumstances, efficient algorithms have not come with guarantees of good accuracy, unless one or both dimensions of the matrix being approximated are small. We describe an efficient algorithm for the low-rank approximation of matrices that pr…
Robust principal component analysis (RPCA) can recover low-rank matrices when they are corrupted by sparse noises. In practice, many matrices are, however, of high-rank and hence cannot be recovered by RPCA. We propose a novel method called robust kernel principal component analysis (RKPCA) to decompose a partially corrupted matrix as a sparse matrix plus a high or full-rank matrix with low latent dimensionality. RKPCA can be applied to many problems such as noise removal and subspace clustering and is still the only unsupervised nonlinear method robust to sparse noises. Our theoretical analys…
We present a novel technique for sparse principal component analysis. This method, named Eigenvectors from Eigenvalues Sparse Principal Component Analysis (EESPCA), is based on the formula for computing squared eigenvector loadings of a Hermitian matrix from the eigenvalues of the full matrix and associated sub-matrices. We explore two versions of the EESPCA method: a version that uses a fixed threshold for inducing sparsity and a version that selects the threshold via cross-validation. Relative to the state-of-the-art sparse PCA methods of Witten et al., Yuan & Zhang and Tan et al., the fixed…
The robust principal component analysis (RPCA) decomposes a data matrix into a low-rank part and a sparse part. There are mainly two types of algorithms for RPCA. The first type of algorithm applies regularization terms on the singular values of a matrix to obtain a low-rank matrix. However, calculating singular values can be very expensive for large matrices. The second type of algorithm replaces the low-rank matrix as the multiplication of two small matrices. They are faster than the first type because no singular value decomposition (SVD) is required. However, the rank of the low-rank matri…
The University of California, Davis（加州大学戴维斯分校）；Google AI（谷歌人工智能）；Princeton University（普林斯顿大学）
Sparse PCA is a widely used technique for high-dimensional data analysis. In this paper, we propose a new method called low-rank principal eigenmatrix analysis. Different from sparse PCA, the dominant eigenvectors are allowed to be dense but are assumed to have a low-rank structure when matricized appropriately. Such a structure arises naturally in several practical cases: Indeed the top eigenvector of a circulant matrix, when matricized appropriately is a rank-1 matrix. We propose a matricized rank-truncated power method that could be efficiently implemented and establish its computational an…
The research reported in this paper addresses the fundamental task of separation of locally moving or deforming image areas from a static or globally moving background. It builds on the latest developments in the field of robust principal component analysis, specifically, the recently reported practical solutions for the long-standing problem of recovering the low-rank and sparse parts of a large matrix made up of the sum of these two components. This article addresses a few critical issues including: embedding global motion parameters in the matrix decomposition model, i.e., estimation of glo…
Kernel principal component analysis (KPCA) provides a concise set of basis vectors which capture non-linear structures within large data sets, and is a central tool in data analysis and learning. To allow for non-linear relations, typically a full $n \times n$ kernel matrix is constructed over $n$ data points, but this requires too much space and time for large values of $n$. Techniques such as the Nyström method and random feature maps can help towards this goal, but they do not explicitly maintain the basis vectors in a stream and take more space than desired. We propose a new approach for s…
Principal Component Analysis is a novel way of of dimensionality reduction. This problem essentially boils down to finding the top k eigen vectors of the data covariance matrix. A considerable amount of literature is found on algorithms meant to do so such as an online method be Warmuth and Kuzmin, Matrix Stochastic Gradient by Arora, Oja's method and many others. In this paper we see some of these stochastic approaches to the PCA optimization problem and comment on their convergence and runtime to obtain an epsilon sub-optimal solution. We revisit convex relaxation based methods for stochasti…
In this paper, we consider the problem of forming machine cell in cellular manufacturing (CM). The major problem in the design of a CM system is to identify the part families and machine groups and consequently to form manufacturing cells. The aim of this article is to formulate a multivariate approach based on a correlation analysis for solving cell formation problem. The proposed approach is carried out in two phases. In the first phase, the correlation matrix is used as an original similarity coefficient matrix. In the second phase, Principal Component Analysis (PCA) is applied to find the …
Stochastic principal component analysis (SPCA) has become a popular dimensionality reduction strategy for large, high-dimensional datasets. We derive a simplified algorithm, called Lazy SPCA, which has reduced computational complexity and is better suited for large-scale distributed computation. We prove that SPCA and Lazy SPCA find the same approximations to the principal subspace, and that the pairwise distances between samples in the lower-dimensional space is invariant to whether SPCA is executed lazily or not. Empirical studies find downstream predictive performance to be identical for bo…
Analyzing principal components for multivariate data from its spatial sign covariance matrix (SCM) has been proposed as a computationally simple and robust alternative to normal PCA, but it suffers from poor efficiency properties and is actually inadmissible with respect to the maximum likelihood estimator. Here we use data depth-based spatial ranks in place of spatial signs to obtain the orthogonally equivariant Depth Covariance Matrix (DCM) and use its eigenvector estimates for PCA. We derive asymptotic properties of the sample DCM and influence functions of its eigenvectors. The shapes of t…
The geometric median covariation matrix is a robust multivariate indicator of dispersion which can be extended without any difficulty to functional data. We define estimators, based on recursive algorithms, that can be simply updated at each new observation and are able to deal rapidly with large samples of high dimensional data without being obliged to store all the data in memory. Asymptotic convergence properties of the recursive algorithms are studied under weak conditions. The computation of the principal components can also be performed online and this approach can be useful for online o…
Principal loading analysis is a dimension reduction method that discards variables which have only a small distorting effect on the covariance matrix. We complement principal loading analysis and propose to rather use a mix of both, the correlation and covariance matrix instead. Further, we suggest to use rescaled eigenvectors and provide updated algorithms for all proposed changes.
