In this paper we discuss new adaptive proposal strategies for sequential Monte Carlo algorithms--also known as particle filters--relying on criteria evaluating the quality of the proposed particles. The choice of the proposal distribution is a major concern and can dramatically influence the quality of the estimates. Thus, we show how the long-used coefficient of variation of the weights can be used for estimating the chi-square distance between the target and instrumental distributions of the auxiliary particle filter. As a by-product of this analysis we obtain an auxiliary adjustment multiplier weight type for which this chi-square distance is minimal. Moreover, we establish an empirical estimate of linear complexity of the Kullback-Leibler divergence between the involved distributions. Guided by these results, we discuss adaptive designing of the particle filter proposal distribution and illustrate the methods on a numerical example.
A Monte Carlo algorithm is said to be adaptive if it automatically calibrates its current proposal distribution using past simulations. The choice of the parametric family that defines the set of proposal distributions is critical for good performance. In this paper, we present such a parametric family for adaptive sampling on high-dimensional binary spaces. A practical motivation for this problem is variable selection in a linear regression context. We want to sample from a Bayesian posterior distribution on the model space using an appropriate version of Sequential Monte Carlo. Raw versions …
Cognitive diagnosis models (CDMs) are useful statistical tools to provide rich information relevant for intervention and learning. As a popular approach to estimate and make inference of CDMs, the Markov chain Monte Carlo (MCMC) algorithm is widely used in practice. However, when the number of attributes, $K$, is large, the existing MCMC algorithm may become time-consuming, due to the fact that $O(2^K)$ calculations are usually needed in the process of MCMC sampling to get the conditional distribution for each attribute profile. To overcome this computational issue, motivated by Culpepper and …
This is a collection of three written discussions of the paper "sequential quasi-Monte Carlo sampling" by M. Gerber and N. Chopin, following the presentation given before the Royal Statistical Society in London on December 10th, 2014.
This paper introduces a new Importance Sampling scheme, called Adaptive Twisted Importance Sampling, which is adequate for the improved estimation of rare event probabilities in he range of moderate deviations pertaining to the empirical mean of real i.i.d. summands. It is based on a sharp approximation of the density of long runs extracted from a random walk conditioned on its end value.
The variance reduction established by importance sampling strongly depends on the choice of the importance sampling distribution. A good choice is often hard to achieve especially for high-dimensional integration problems. Nonparametric estimation of the optimal importance sampling distribution (known as nonparametric importance sampling) is a reasonable alternative to parametric approaches.In this article nonparametric variants of both the self-normalized and the unnormalized importance sampling estimator are proposed and investigated. A common critique on nonparametric importance sampling is…
Sequential importance sampling algorithms have been defined to estimate likelihoods in models of ancestral population processes. However, these algorithms are based on features of the models with constant population size, and become inefficient when the population size varies in time, making likelihood-based inferences difficult in many demographic situations. In this work, we modify a previous sequential importance sampling algorithm to improve the efficiency of the likelihood estimation. Our procedure is still based on features of the model with constant size, but uses a resampling technique…
Bayesian inference under a set of priors, called robust Bayesian analysis, allows for estimation of parameters within a model and quantification of epistemic uncertainty in quantities of interest by bounded (or imprecise) probability. Iterative importance sampling can be used to estimate bounds on the quantity of interest by optimizing over the set of priors. A method for iterative importance sampling when the robust Bayesian inference rely on Markov chain Monte Carlo (MCMC) sampling is proposed. To accommodate the MCMC sampling in iterative importance sampling, a new expression for the effect…
We describe an algorithm for the sequential sampling of entries in multiway contingency tables with given constraints. The algorithm can be used for computations in exact conditional inference. To justify the algorithm, a theory relates sampling values at each step to properties of the associated toric ideal using computational commutative algebra. In particular, the property of interval cell counts at each step is related to exponents on lead indeterminates of a lexicographic Gröbner basis. Also, the approximation of integer programming by linear programming for sampling is related to initial…
In this comment we consider whether QMC methods can be further embedded within SMC schemes in settings in which the transition density of the latent process is intractable and pseudo-marginal methods are deployed.
We develop a theoretical framework for studying numerical estimation of lower previsions, generally applicable to two-level Monte Carlo methods, importance sampling methods, and a wide range of other sampling methods one might devise. We link consistency of these estimators to Glivenko-Cantelli classes, and for the sub-Gaussian case we show how the correlation structure of this process can be used to bound the bias and prove consistency. We also propose a new upper estimator, which can be used along with the standard lower estimator, in order to provide a simple confidence interval. As a case …
In this paper, we propose a sequential directional importance sampling (SDIS) method for rare event estimation. SDIS expresses a small failure probability in terms of a sequence of auxiliary failure probabilities, defined by magnifying the input variability. The first probability in the sequence is estimated with Monte Carlo simulation in Cartesian coordinates, and all the subsequent ones are computed with directional importance sampling in polar coordinates. Samples from the directional importance sampling densities used to estimate the intermediate probabilities are drawn in a sequential man…
Sequential Monte Carlo (SMC) methods are a class of Monte Carlo methods that are used to obtain random samples of a high dimensional random variable in a sequential fashion. Many problems encountered in applications often involve different types of constraints. These constraints can make the problem much more challenging. In this paper, we formulate a general framework of using SMC for constrained sampling problems based on forward and backward pilot resampling strategies. We review some existing methods under the framework and develop several new algorithms. It is noted that all information o…
Adaptive importance sampling is a class of techniques for finding good proposal distributions for importance sampling. Often the proposal distributions are standard probability distributions whose parameters are adapted based on the mismatch between the current proposal and a target distribution. In this work, we present an implicit adaptive importance sampling method that applies to complicated distributions which are not available in closed form. The method iteratively matches the moments of a set of Monte Carlo draws to weighted moments based on importance weights. We apply the method to Ba…
We show that the variance of the Monte Carlo estimator that is importance sampled from an exponential family is a convex function of the natural parameter of the distribution. With this insight, we propose an adaptive importance sampling algorithm that simultaneously improves the choice of sampling distribution while accumulating a Monte Carlo estimate. Exploiting convexity, we prove that the method's unbiased estimator has variance that is asymptotically optimal over the exponential family.
The junction-tree representation provides an attractive structural property for organizing a decomposable graph. In this study, we present two novel stochastic algorithms, which we call the junction-tree expander and junction-tree collapser for sequential sampling of junction trees for decomposable graphs. We show that recursive application of the junction-tree expander, expanding incrementally the underlying graph with one vertex at a time, has full support on the space of junction trees with any given number of underlying vertices. On the other hand, the junction-tree collapser provides a co…
This paper surveys some well-established approaches on the approximation of Bayes factors used in Bayesian model choice, mostly as covered in Chen et al. (2000). Our focus here is on methods that are based on importance sampling strategies rather than variable dimension techniques like reversible jump MCMC, including: crude Monte Carlo, maximum likelihood based importance sampling, bridge and harmonic mean sampling, as well as Chib's method based on the exploitation of a functional equality. We demonstrate in this survey how these different methods can be efficiently implemented for testing th…
Multifidelity approximate Bayesian computation (MF-ABC) is a likelihood-free technique for parameter inference that exploits model approximations to significantly increase the speed of ABC algorithms (Prescott and Baker, 2020). Previous work has considered MF-ABC only in the context of rejection sampling, which does not explore parameter space particularly efficiently. In this work, we integrate the multifidelity approach with the ABC sequential Monte Carlo (ABC-SMC) algorithm into a new MF-ABC-SMC algorithm. We show that the improvements generated by each of ABC-SMC and MF-ABC to the efficien…
In recent years, sequential importance sampling (SIS) has been well developed for sampling contingency tables with linear constraints. In this paper, we apply SIS procedure to 2-dimensional Ising models, which give observations of 0-1 tables and include both linear and quadratic constraints. We show how to compute bounds for specific cells by solving linear programming (LP) problems over cut polytopes to reduce rejections. The computational results, which includes both simulations and real data analysis, suggest that our method performs very well for sparse tables and when the 1's are spread o…
In this note we develop a prelimit analysis of performance measures for importance sampling schemes related to small noise diffusion processes. In importance sampling the performance of any change of measure is characterized by its second moment. For a given change of measure, we characterize the second moment of the corresponding estimator as the solution to a PDE, which we analyze via a full asymptotic expansion with respect to the size of the noise and obtain a precise statement on its accuracy. The main correction term to the decay rate of the second moment solves a transport equation that…
In 2005, Chen et al introduced a sequential importance sampling (SIS) procedure to analyze zero-one two-way tables with given fixed marginal sums (row and column sums) via the conditional Poisson (CP) distribution. They showed that compared with Monte Carlo Markov chain (MCMC)-based approaches, their importance sampling method is more efficient in terms of running time and also provides an easy and accurate estimate of the total number of contingency tables with fixed marginal sums. In this paper we extend their result to zero-one multi-way ($d$-way, $d \geq 2$) contingency tables under the no…
This note introduces a method for sampling Ising models with mixed boundary conditions. As an application of annealed importance sampling and the Swendsen-Wang algorithm, the method adopts a sequence of intermediate distributions that keeps the temperature fixed but turns on the boundary condition gradually. The numerical results show that the variance of the sample weights is relatively small.
Importance sampling is used to approximate Bayes' rule in many computational approaches to Bayesian inverse problems, data assimilation and machine learning. This paper reviews and further investigates the required sample size for importance sampling in terms of the $χ^2$-divergence between target and proposal. We develop general abstract theory and illustrate through numerous examples the roles that dimension, noise-level and other model parameters play in approximating the Bayesian update with importance sampling. Our examples also facilitate a new direct comparison of standard and optimal p…
Importance sampling is a widely used technique to estimate properties of a distribution. This paper investigates trading-off some bias for variance by adaptively winsorizing the importance sampling estimator. The novel winsorizing procedure, based on the Balancing Principle (or Lepskii's Method), chooses a threshold level among a pre-defined set by roughly balancing the bias and variance of the estimator when winsorized at different levels. As a consequence, it provides a principled way to perform winsorization with finite-sample optimality guarantees under minimal assumptions. In various exam…
In this paper, we propose an efficient simulation method based on adaptive importance sampling, which can automatically find the optimal proposal within the Gaussian family based on previous samples, to evaluate the probability of bit error rate (BER) or word error rate (WER). These two measures, which involve high-dimensional black-box integration and rare-event sampling, can characterize the performance of coded modulation. We further integrate the quasi-Monte Carlo method within our framework to improve the convergence speed. The proposed importance sampling algorithm is demonstrated to hav…
We present a sequential Monte Carlo sampler algorithm for the Bayesian analysis of generalised linear mixed models (GLMMs). These models support a variety of interesting regression-type analyses, but performing inference is often extremely difficult, even when using the Bayesian approach combined with Markov chain Monte Carlo (MCMC). The Sequential Monte Carlo sampler (SMC) is a new and general method for producing samples from posterior distributions. In this article we demonstrate use of the SMC method for performing inference for GLMMs. We demonstrate the effectiveness of the method on both…
Adaptive importance sampling is a widely spread Monte Carlo technique that uses a re-weighting strategy to iteratively estimate the so-called target distribution. A major drawback of adaptive importance sampling is the large variance of the weights which is known to badly impact the accuracy of the estimates. This paper investigates a regularization strategy whose basic principle is to raise the importance weights at a certain power. This regularization parameter, that might evolve between zero and one during the algorithm, is shown (i) to balance between the bias and the variance and (ii) to …
The estimation of the probability of rare events is an important task in reliability and risk assessment. We consider failure events that are expressed in terms of a limit state function, which depends on the solution of a partial differential equation (PDE). Since numerical evaluations of PDEs are computationally expensive, estimating such probabilities of failure by Monte Carlo sampling is intractable. More efficient sampling methods from reliability analysis, such as Subset Simulation, are popular, but can still be impracticable if the PDE evaluations are very costly. In this article, we de…
In this note, we try to trace the birth of importance sampling (IS) back to 1949. We found the classical formulation of IS in a paper from Kahn in June 1949. As for the appearance of the expression importance sampling itself, it may have appeared a few months later, maybe in 1949 during conferences, but there is no published article with the name before 1950.
The Adaptive Multiple Importance Sampling (AMIS) algorithm is aimed at an optimal recycling of past simulations in an iterated importance sampling scheme. The difference with earlier adaptive importance sampling implementations like Population Monte Carlo is that the importance weights of all simulated values, past as well as present, are recomputed at each iteration, following the technique of the deterministic multiple mixture estimator of Owen and Zhou (2000). Although the convergence properties of the algorithm cannot be fully investigated, we demonstrate through a challenging banana shape…
We describe a simple Importance Sampling strategy for Monte Carlo simulations based on a least squares optimization procedure. With several numerical examples, we show that such Least Squares Importance Sampling (LSIS) provides efficiency gains comparable to the state of the art techniques, when the latter are known to perform well. However, in contrast to traditional approaches, LSIS is not limited to the determination of the optimal mean of a Gaussian sampling distribution. As a result, it outperforms other methods when the ability to adjust higher moments of the sampling distribution, or to…
Importance sampling is a popular variance reduction method for Monte Carlo estimation, where a notorious question is how to design good proposal distributions. While in most cases optimal (zero-variance) estimators are theoretically possible, in practice only suboptimal proposal distributions are available and it can often be observed numerically that those can reduce statistical performance significantly, leading to large relative errors and therefore counteracting the original intention. In this article, we provide nonasymptotic lower and upper bounds on the relative error in importance samp…
In this paper, we propose an adaptive algorithm that iteratively updates both the weights and component parameters of a mixture importance sampling density so as to optimise the importance sampling performances, as measured by an entropy criterion. The method is shown to be applicable to a wide class of importance sampling densities, which includes in particular mixtures of multivariate Student t distributions. The performances of the proposed scheme are studied on both artificial and real examples, highlighting in particular the benefit of a novel Rao-Blackwellisation device which can be easi…
We present a new method for conducting Monte Carlo inference in graphical models which combines explicit search with generalized importance sampling. The idea is to reduce the variance of importance sampling by searching for significant points in the target distribution. We prove that it is possible to introduce search and still maintain unbiasedness. We then demonstrate our procedure on a few simple inference tasks and show that it can improve the inference quality of standard MCMC methods, including Gibbs sampling, Metropolis sampling, and Hybrid Monte Carlo. This paper extends previous work…
In many stochastic problems, the output of interest depends on an input random vector mainly through a single random variable (or index) via an appropriate univariate transformation of the input. We exploit this feature by proposing an importance sampling method that makes rare events more likely by changing the distribution of the chosen index. Further variance reduction is guaranteed by combining this single-index importance sampling approach with stratified sampling. The dimension-reduction effect of single-index importance sampling also enhances the effectiveness of quasi-Monte Carlo metho…
Adaptive importance sampling is a powerful tool to sample from complicated target densities, but its success depends sensitively on the initial proposal density. An algorithm is presented to automatically perform the initialization using Markov chains and hierarchical clustering. The performance is checked on challenging multimodal examples in up to 20 dimensions and compared to results from nested sampling. Our approach yields a proposal that leads to rapid convergence and accurate estimation of overall normalization and marginal distributions.
We propose a method to efficiently integrate truncated probability densities. The method uses Markov chain Monte Carlo method to sample from a probability density matching the function being integrated. The required normalisation or equivalently the result is obtained by constructing a function with known integral, through non-parametric kernel density estimation and variational procedure. The method is demonstrated with numerical case studies. Possible enhancements to the method and limitations are discussed.
Importance sampling is a Monte Carlo method that introduces a proposal distribution to sample the space according to the target distribution. Yet calibration of the proposal distribution is essential to achieving efficiency, thus the resort to adaptive algorithms to tune this distribution. In the paper, we propose a new adpative importance sampling scheme, named Tempered Anti-truncated Adaptive Multiple Importance Sampling (TAMIS) algorithm. We combine a tempering scheme and a new nonlinear transformation of the weights we named anti-truncation. For efficiency, we were also concerned not to in…
In this paper, I proof that Importance Sampling estimates based on dependent sample sets are consistent under certain conditions. This can be used to reduce variance in Bayesian Models with factorizing likelihoods, using sample sets that are much larger than the number of likelihood evaluations, a technique dubbed Sample Inflation. I evaluate Sample Inflation on a toy Gaussian problem and two Mixture Models.
Importance sampling is often used in machine learning when training and testing data come from different distributions. In this paper we propose a new variant of importance sampling that can reduce the variance of importance sampling-based estimates by orders of magnitude when the supports of the training and testing distributions differ. After motivating and presenting our new importance sampling estimator, we provide a detailed theoretical analysis that characterizes both its bias and variance relative to the ordinary importance sampling estimator (in various settings, which include cases wh…
Importance sampling approximates expectations with respect to a target measure by using samples from a proposal measure. The performance of the method over large classes of test functions depends heavily on the closeness between both measures. We derive a general bound that needs to hold for importance sampling to be successful, and relates the $f$-divergence between the target and the proposal to the sample size. The bound is deduced from a new and simple information theory paradigm for the study of importance sampling. As examples of the general theory we give necessary conditions on the sam…
We consider systems of slow--fast diffusions with small noise in the slow component. We construct provably logarithmic asymptotically optimal importance schemes for the estimation of rare events based on the moderate deviations principle. Using the subsolution approach we construct schemes and identify conditions under which the schemes will be asymptotically optimal. Moderate deviations--based importance sampling offers a viable alternative to large deviations importance sampling when the events are not too rare. In particular, in many cases of interest one can indeed construct the required c…
Importance sampling is widely used in machine learning and statistics, but its power is limited by the restriction of using simple proposals for which the importance weights can be tractably calculated. We address this problem by studying black-box importance sampling methods that calculate importance weights for samples generated from any unknown proposal or black-box mechanism. Our method allows us to use better and richer proposals to solve difficult problems, and (somewhat counter-intuitively) also has the additional benefit of improving the estimation accuracy beyond typical importance sa…
Recently developed particle flow algorithms provide an alternative to importance sampling for drawing particles from a posterior distribution, and a number of particle filters based on this principle have been proposed. Samples are drawn from the prior and then moved according to some dynamics over an interval of pseudo-time such that their final values are distributed according to the desired posterior. In practice, implementing a particle flow sampler requires multiple layers of approximation, with the result that the final samples do not in general have the correct posterior distribution. I…
An importance sampling approach for sampling copula models is introduced. We propose two algorithms that improve Monte Carlo estimators when the functional of interest depends mainly on the behaviour of the underlying random vector when at least one of the components is large. Such problems often arise from dependence models in finance and insurance. The importance sampling framework we propose is general and can be easily implemented for all classes of copula models from which sampling is feasible. We show how the proposal distribution of the two algorithms can be optimized to reduce the samp…
